Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408122

Identifier: 41408122

GI number: 41408122

Start: 2231823

End: 2232314

Strand: Reverse

Name: 41408122

Synonym: MAP2024c

Alternate gene names: NA

Gene position: 2232314-2231823 (Counterclockwise)

Preceding gene: 41408123

Following gene: 41408121

Centisome position: 46.22

GC content: 68.29

Gene sequence:

>492_bases
TTGACCGCCCGCCGAGGCAATCTCAACGTCTACCGCACCCTGGCCAACGCCGAGAAGGTCTTCACCAGCTGGATGGTCGC
CGGCGACGCCGCGCTGAGCAGCCCGGTGCTGCCCCGACGGCTGCGCGAACTCATCGTCCTGCGCACCGCATCGGCGATGG
ACTGCGCCTACGAGCTCGGCCAACACCGGGACGTGGCACGAACCGTCGGCATCGACCCCGACACCATCGACGCCGTCATC
TCCGAAACCGGTTGGCAGGCCGGCGATCTCACCCCCACCGAGCTCGCGGTCCTGCACCTGACCACCGAGTTGGTCACCAC
CCGCCGGGTCGCCCAACCACTCTTCGATCGCGTCCACCGAGCTCTCGGCACCGAGGCCACCGTGGAGGCACTGATGGTGA
TCAACCGCTACGCGGGACTGGCGTTGATGCTCAACGCGCTCGAGGTGGACCTCGACGAGACCGCCCGGCTGCCGATACCG
CCGACGAGCTGA

Upstream 100 bases:

>100_bases
TGGCATTAGTCCTTAATGCAACGGACCTCGACATCGACGCACCGACATGACCCGAATCCCGTACCGCCGGCCCGAAGAGA
TGCCCGCCAGAGCCCGCGAA

Downstream 100 bases:

>100_bases
GCCCAACACGGCGGCACCGAGATCGCCAATCTCCTCAGGGGAGAGGACGCCTCCCGTAATCTGCATGATGTGGCACCCAA
GCCCAAGTCAACCCGTCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MTARRGNLNVYRTLANAEKVFTSWMVAGDAALSSPVLPRRLRELIVLRTASAMDCAYELGQHRDVARTVGIDPDTIDAVI
SETGWQAGDLTPTELAVLHLTTELVTTRRVAQPLFDRVHRALGTEATVEALMVINRYAGLALMLNALEVDLDETARLPIP
PTS

Sequences:

>Translated_163_residues
MTARRGNLNVYRTLANAEKVFTSWMVAGDAALSSPVLPRRLRELIVLRTASAMDCAYELGQHRDVARTVGIDPDTIDAVI
SETGWQAGDLTPTELAVLHLTTELVTTRRVAQPLFDRVHRALGTEATVEALMVINRYAGLALMLNALEVDLDETARLPIP
PTS
>Mature_162_residues
TARRGNLNVYRTLANAEKVFTSWMVAGDAALSSPVLPRRLRELIVLRTASAMDCAYELGQHRDVARTVGIDPDTIDAVIS
ETGWQAGDLTPTELAVLHLTTELVTTRRVAQPLFDRVHRALGTEATVEALMVINRYAGLALMLNALEVDLDETARLPIPP
TS

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17836; Mature: 17705

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARRGNLNVYRTLANAEKVFTSWMVAGDAALSSPVLPRRLRELIVLRTASAMDCAYELG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
QHRDVARTVGIDPDTIDAVISETGWQAGDLTPTELAVLHLTTELVTTRRVAQPLFDRVHR
CCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGTEATVEALMVINRYAGLALMLNALEVDLDETARLPIPPTS
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TARRGNLNVYRTLANAEKVFTSWMVAGDAALSSPVLPRRLRELIVLRTASAMDCAYELG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
QHRDVARTVGIDPDTIDAVISETGWQAGDLTPTELAVLHLTTELVTTRRVAQPLFDRVHR
CCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGTEATVEALMVINRYAGLALMLNALEVDLDETARLPIPPTS
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA