| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408109
Identifier: 41408109
GI number: 41408109
Start: 2219962
End: 2220309
Strand: Direct
Name: 41408109
Synonym: MAP2011
Alternate gene names: NA
Gene position: 2219962-2220309 (Clockwise)
Preceding gene: 41408108
Following gene: 41408112
Centisome position: 45.96
GC content: 65.8
Gene sequence:
>348_bases ATGAGCGCGCGAGACGATCAAGCCTCTGGCCGAGACGATGATCAGCGGTTGACCGAGAAGCCCGAACCCGACGAGGACGA CAAGAAGAAGGCCGCCGAGATGATGGAGGCCTACGAGGACAAGGCCACCATCGTGCTGCCCGGCACCGGCGGCAGCGTGT CCGGGACGGCGGTCAACGAGTGGCTGGACGAGGACGGCAATCCCAAGCATGAAGTCGCCGAGGGCACCGATCACGCCGAC GAGGGCCGCGACGAGCAGGCCTTGCGGGATCAGATCGAGAAGGACAAGGCCCTCAACGAGGTGCTCCGGGAAGCCGCCGC CGCCCCGAATAAGGGCGAAAAGGGCTGA
Upstream 100 bases:
>100_bases GGTCAAGCGCGAGGCGGCGCAGTGATGAGAGTTTCGGCACAACAGCGCAGCGGGTAACCCCACGGAATCGTCGAATCTGC GACTGCGAGGGGGTAGATGC
Downstream 100 bases:
>100_bases GCCGTAAGGGAATTACCCGACGCCCAGGTTGCCTTCGATTTCCTGAATGATCTGGTTGACCCGGTCCAGCCCGGGGATGG GTTCGTTGAGCCCGGGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSARDDQASGRDDDQRLTEKPEPDEDDKKKAAEMMEAYEDKATIVLPGTGGSVSGTAVNEWLDEDGNPKHEVAEGTDHAD EGRDEQALRDQIEKDKALNEVLREAAAAPNKGEKG
Sequences:
>Translated_115_residues MSARDDQASGRDDDQRLTEKPEPDEDDKKKAAEMMEAYEDKATIVLPGTGGSVSGTAVNEWLDEDGNPKHEVAEGTDHAD EGRDEQALRDQIEKDKALNEVLREAAAAPNKGEKG >Mature_114_residues SARDDQASGRDDDQRLTEKPEPDEDDKKKAAEMMEAYEDKATIVLPGTGGSVSGTAVNEWLDEDGNPKHEVAEGTDHADE GRDEQALRDQIEKDKALNEVLREAAAAPNKGEKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12507; Mature: 12376
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARDDQASGRDDDQRLTEKPEPDEDDKKKAAEMMEAYEDKATIVLPGTGGSVSGTAVNE CCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHH WLDEDGNPKHEVAEGTDHADEGRDEQALRDQIEKDKALNEVLREAAAAPNKGEKG HHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SARDDQASGRDDDQRLTEKPEPDEDDKKKAAEMMEAYEDKATIVLPGTGGSVSGTAVNE CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHH WLDEDGNPKHEVAEGTDHADEGRDEQALRDQIEKDKALNEVLREAAAAPNKGEKG HHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA