| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408108
Identifier: 41408108
GI number: 41408108
Start: 2218819
End: 2219886
Strand: Direct
Name: 41408108
Synonym: MAP2010
Alternate gene names: NA
Gene position: 2218819-2219886 (Clockwise)
Preceding gene: 41408107
Following gene: 41408109
Centisome position: 45.94
GC content: 71.35
Gene sequence:
>1068_bases GTGGTCCGGCCGGAACCCACCTACACCGAGGCCTCGCGGCTGCGCGCCGCCGGTTTGACGAAGGCGATCGCGCAGTTCGA GCGGGCCGCCGAGCAGGTGGCGCTGCCCAAGGCCCCGCAGCCGATCGTCGTCGCCGACTACGGCGCCGCCAACGGCCACA ATTCGCTCAAGCCGTTGTCGGCGGCCGTTTCGGTGCTGCGCCGGCGCACCCGCCCCGATCACGCAATCCTGGTGGCGCAC ACCGATTTACCGGGCAATGACTTCTCGGCGCTGTTCGACACTGTCGCCGACGACCCGGAGAGCTACCTGCACGCGGATGC GGCGACGTTCACCTCGGCGATCGGCCGGTCGTTCTACAACCAGATCGTGCCGTCGCGGACGGTCAACCTGGGCTGGACAT CGTGGGCGACGCGGTGGCTCAGCCGCACCCCGGGTGCGGTGCCCGATCATGTGCACGTGTCGTGCAGCAGGGACGACGCG GTGCTGGCGGCCTACGCCGACCAGGCCGCGCTGGACTGGCACAACTTCGTCGCCTTCCGGGGCCGCGAGCTGGCCCCCGA GGGCCGGCTGGTGGCGTTGACCCTGGCCGCCGACGAGGAGGACGGGCGCTGCTCGGCGGGTTTCGCCGCGCTGCTCGACG CCATCGTCGAGGCGCTCGAGGATCAGCGGCGCGACGGCCTGCTGCGCCCGGATGAGTTGCAGCGCATGACGATTCCCACC TTCGCCCGCAGCGAGAAGGATTTTCGCGCACCGTTCGCGCCGAAGGGTCGGTTCGAGGGGTTGATGGTCGAGCAGCTGGA GATCTTCAACGCCGAGGACCGGTTCTGGGCTCGCTTCCAGGCCGACCACGACGCCGAGGCGTTCGGCGCGCAGTGGGCGG CCTTCGCGCGGTCCGCGCTGTTCCCCGCGCTGGTGGCCGGACTCGACGACGGGATCCGCGACCCGCGGGCCCCGCGGTTC GTCGAGCAGCTGCAGAGCGCGATCGCCCAGCGCCTGTCAAGCGCGCCCGAGCCGATGCGGATCCCGCAGGCGCTGGTGGT GCTGGTCAAGCGCGAGGCGGCGCAGTGA
Upstream 100 bases:
>100_bases GCCACTGATCCCGGCAAGCCGAACTGACCGGCAACTCAACCACTATCGTTGATCCATGCCTGAACCTGGGACGCCCGAAT CGGGCCTCCAATCAAGCATC
Downstream 100 bases:
>100_bases TGAGAGTTTCGGCACAACAGCGCAGCGGGTAACCCCACGGAATCGTCGAATCTGCGACTGCGAGGGGGTAGATGCATGAG CGCGCGAGACGATCAAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MVRPEPTYTEASRLRAAGLTKAIAQFERAAEQVALPKAPQPIVVADYGAANGHNSLKPLSAAVSVLRRRTRPDHAILVAH TDLPGNDFSALFDTVADDPESYLHADAATFTSAIGRSFYNQIVPSRTVNLGWTSWATRWLSRTPGAVPDHVHVSCSRDDA VLAAYADQAALDWHNFVAFRGRELAPEGRLVALTLAADEEDGRCSAGFAALLDAIVEALEDQRRDGLLRPDELQRMTIPT FARSEKDFRAPFAPKGRFEGLMVEQLEIFNAEDRFWARFQADHDAEAFGAQWAAFARSALFPALVAGLDDGIRDPRAPRF VEQLQSAIAQRLSSAPEPMRIPQALVVLVKREAAQ
Sequences:
>Translated_355_residues MVRPEPTYTEASRLRAAGLTKAIAQFERAAEQVALPKAPQPIVVADYGAANGHNSLKPLSAAVSVLRRRTRPDHAILVAH TDLPGNDFSALFDTVADDPESYLHADAATFTSAIGRSFYNQIVPSRTVNLGWTSWATRWLSRTPGAVPDHVHVSCSRDDA VLAAYADQAALDWHNFVAFRGRELAPEGRLVALTLAADEEDGRCSAGFAALLDAIVEALEDQRRDGLLRPDELQRMTIPT FARSEKDFRAPFAPKGRFEGLMVEQLEIFNAEDRFWARFQADHDAEAFGAQWAAFARSALFPALVAGLDDGIRDPRAPRF VEQLQSAIAQRLSSAPEPMRIPQALVVLVKREAAQ >Mature_355_residues MVRPEPTYTEASRLRAAGLTKAIAQFERAAEQVALPKAPQPIVVADYGAANGHNSLKPLSAAVSVLRRRTRPDHAILVAH TDLPGNDFSALFDTVADDPESYLHADAATFTSAIGRSFYNQIVPSRTVNLGWTSWATRWLSRTPGAVPDHVHVSCSRDDA VLAAYADQAALDWHNFVAFRGRELAPEGRLVALTLAADEEDGRCSAGFAALLDAIVEALEDQRRDGLLRPDELQRMTIPT FARSEKDFRAPFAPKGRFEGLMVEQLEIFNAEDRFWARFQADHDAEAFGAQWAAFARSALFPALVAGLDDGIRDPRAPRF VEQLQSAIAQRLSSAPEPMRIPQALVVLVKREAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38964; Mature: 38964
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPEPTYTEASRLRAAGLTKAIAQFERAAEQVALPKAPQPIVVADYGAANGHNSLKPLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHH AAVSVLRRRTRPDHAILVAHTDLPGNDFSALFDTVADDPESYLHADAATFTSAIGRSFYN HHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH QIVPSRTVNLGWTSWATRWLSRTPGAVPDHVHVSCSRDDAVLAAYADQAALDWHNFVAFR HHCCCCEEECCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHC GRELAPEGRLVALTLAADEEDGRCSAGFAALLDAIVEALEDQRRDGLLRPDELQRMTIPT CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCH FARSEKDFRAPFAPKGRFEGLMVEQLEIFNAEDRFWARFQADHDAEAFGAQWAAFARSAL HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH FPALVAGLDDGIRDPRAPRFVEQLQSAIAQRLSSAPEPMRIPQALVVLVKREAAQ HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MVRPEPTYTEASRLRAAGLTKAIAQFERAAEQVALPKAPQPIVVADYGAANGHNSLKPLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHH AAVSVLRRRTRPDHAILVAHTDLPGNDFSALFDTVADDPESYLHADAATFTSAIGRSFYN HHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH QIVPSRTVNLGWTSWATRWLSRTPGAVPDHVHVSCSRDDAVLAAYADQAALDWHNFVAFR HHCCCCEEECCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHC GRELAPEGRLVALTLAADEEDGRCSAGFAALLDAIVEALEDQRRDGLLRPDELQRMTIPT CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCH FARSEKDFRAPFAPKGRFEGLMVEQLEIFNAEDRFWARFQADHDAEAFGAQWAAFARSAL HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH FPALVAGLDDGIRDPRAPRFVEQLQSAIAQRLSSAPEPMRIPQALVVLVKREAAQ HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA