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The map label for this gene is 41408086

Identifier: 41408086

GI number: 41408086

Start: 2193490

End: 2194305

Strand: Direct

Name: 41408086

Synonym: MAP1988

Alternate gene names: NA

Gene position: 2193490-2194305 (Clockwise)

Preceding gene: 41408084

Following gene: 41408088

Centisome position: 45.42

GC content: 69.61

Gene sequence:

>816_bases
ATGAAGCGGCCCGCGAAGCGGGTCGCCGACCTGCTGAATCCGGCGGCGACGTTGCTGCCCGCCGCCAACGTCATCATGCA
GCTGTCCCTGCCCGGCGTCGGCTACGGCGTGCTGGAAAGCCCGGTGGACAGCGGCAACGTCTACAAGCATCCGTTCAAGC
GGGCCCGCACCACCGGCACCTATCTGGCCGCCGCGACCATCGGCACCGACTACGACCGGGCGTTGATCTGCGCGGCGGTG
GACGTCGCCCACCGGCAGGTGCGGTCCAGGCCGTCAAGCCCGGTGTCCTACAACGCTTTTGACCCCAAGCTGCAGCTGTG
GGTGGCGGCGTGCCTGTACCGCTACTTCGTCGACCAGCACGAGTTCCTGCACGGCCCGCTGGATGAGGCCTCGGCCGACG
CGGTCTATCGCGACGCCGCGCGGCTGGGCACCACGCTGCAGGTGCCCGAACGGATGTGGCCGCCGGCCCGGGCCGCCTTC
GACGAGTACTGGAAACGCTCGCTCGACGAGCTGCGCATCGACCCGCCGGTGCGCGAGCACCTGCACGGGGTGGCGTCGCT
GGCCTTCCTGCCCTGGCCGCTGCGGGTGCTGGCCGGGCCGTTCAACCTGTTTGCGACGACGGGGTTCTTGGCCCCCGAGT
TCCGCGAGATGATGCAGCTGGATTGGACGCCGGCCCAGCAGCGCCGGTTCGGCTGGCTGCTGTTCTCGTTGCGGCTGGCC
GACCGGTTGATCCCGCACTGGGTGTGGATCCTCGGCTATCGAATTTACTTGTGGGACATGCGATCCCGGGCGCGCCAGGG
CCGCCGGGTGGTCTAG

Upstream 100 bases:

>100_bases
GTCGGCCAGGTAACCGATCAGCACGCCGAGGGGGTGCGTCGCCAACACCTGCGCAGCGTCTCATACTGGGGTTCATGGAA
TCGACGAGGCGGGGCCCGCA

Downstream 100 bases:

>100_bases
CTAGCCCGCCCTCAGCGCACCGTCGCGAAGAACACGCGCAGATCCTCGACGAACAGCTCCGGCTGCTCGAACGCGGCGAA
ATGCCCGCCGCGCGGCATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKRPAKRVADLLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGTDYDRALICAAV
DVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDEASADAVYRDAARLGTTLQVPERMWPPARAAF
DEYWKRSLDELRIDPPVREHLHGVASLAFLPWPLRVLAGPFNLFATTGFLAPEFREMMQLDWTPAQQRRFGWLLFSLRLA
DRLIPHWVWILGYRIYLWDMRSRARQGRRVV

Sequences:

>Translated_271_residues
MKRPAKRVADLLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGTDYDRALICAAV
DVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDEASADAVYRDAARLGTTLQVPERMWPPARAAF
DEYWKRSLDELRIDPPVREHLHGVASLAFLPWPLRVLAGPFNLFATTGFLAPEFREMMQLDWTPAQQRRFGWLLFSLRLA
DRLIPHWVWILGYRIYLWDMRSRARQGRRVV
>Mature_271_residues
MKRPAKRVADLLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGTDYDRALICAAV
DVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDEASADAVYRDAARLGTTLQVPERMWPPARAAF
DEYWKRSLDELRIDPPVREHLHGVASLAFLPWPLRVLAGPFNLFATTGFLAPEFREMMQLDWTPAQQRRFGWLLFSLRLA
DRLIPHWVWILGYRIYLWDMRSRARQGRRVV

Specific function: Unknown

COG id: COG3662

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018713 [H]

Pfam domain/function: PF09995 DUF2236 [H]

EC number: NA

Molecular weight: Translated: 30928; Mature: 30928

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPAKRVADLLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGT
CCCHHHHHHHHHCHHHHHHHHHHHHEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCC
YLAAATIGTDYDRALICAAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQH
EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
EFLHGPLDEASADAVYRDAARLGTTLQVPERMWPPARAAFDEYWKRSLDELRIDPPVREH
HHHCCCCCHHHHHHHHHHHHHHCCEEECCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHH
LHGVASLAFLPWPLRVLAGPFNLFATTGFLAPEFREMMQLDWTPAQQRRFGWLLFSLRLA
HHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DRLIPHWVWILGYRIYLWDMRSRARQGRRVV
HHHHHHHHHHHHHHHHEEHHHHHHHCCCCCC
>Mature Secondary Structure
MKRPAKRVADLLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGT
CCCHHHHHHHHHCHHHHHHHHHHHHEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCC
YLAAATIGTDYDRALICAAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQH
EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
EFLHGPLDEASADAVYRDAARLGTTLQVPERMWPPARAAFDEYWKRSLDELRIDPPVREH
HHHCCCCCHHHHHHHHHHHHHHCCEEECCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHH
LHGVASLAFLPWPLRVLAGPFNLFATTGFLAPEFREMMQLDWTPAQQRRFGWLLFSLRLA
HHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DRLIPHWVWILGYRIYLWDMRSRARQGRRVV
HHHHHHHHHHHHHHHHEEHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]