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The map label for this gene is 41408084

Identifier: 41408084

GI number: 41408084

Start: 2191684

End: 2192511

Strand: Direct

Name: 41408084

Synonym: MAP1986

Alternate gene names: NA

Gene position: 2191684-2192511 (Clockwise)

Preceding gene: 41408083

Following gene: 41408086

Centisome position: 45.38

GC content: 70.77

Gene sequence:

>828_bases
ATGCCCCGGTGGCTGCGCGGCTTGTCGTTTCTGCTGCGGCCGGGCTGGGTCGTGCTGGCACTGGTGGTGGTCGCGTTCGC
GTACCTGTGCTTCACCGTGCTCGCGCCCTGGCAGCTGGGCAAGCACAGCAGGACCTCGCAGCAGAACCACCAGATCGAAC
ACTCCCTGACCACCCCGCCCGTCCCGCTGAAAACCCTGCTGCCGCAACAAAACTCGGCCGCCCCGGCCGAGCAGTGGCGG
CAGGTGAGCGCCACCGGCCACTATCTGGCCGACGTGCAGGTGCTGGCCCGGCTGCGGGTGATCGACTCCAAACCGGCGTT
CGAGGTGCTGGCGCCCTTCGTGGTCGACGGCGGGCCCACCGTCTTGGTCGACCGCGGATACGTGCGGCCGTTGGAGGGGT
CGCGGGTCCCGCCGATCCCCCGCCCGCCCGCCGACACGGTGACCATCACCGCCCGGCTGCGCAACTCCGAGCCCGCCGCC
GGCAAGGACCCGTTCGTGGGAGACGGTGTGCGGCAGGTGTATTCGATCGACACCGAGCAGATCGCGGTGCTCACCAAGGT
GCCGCTCGCCGGGTCCTATCTGCAGTTGGTCGACGGTCAGCCCGGCGGGCTGGGGGTGGTCGGCGTGCCGCAACTGGACG
CCGGCCCGTTCCTGTCCTACGGCATCCAGTGGATCGCGTTCGGCATCCTGGCCCCGATCGGGGTGGGTTATTTCGCCTAC
TCCGAGCTGCGGGCCCGCCGCGCGGAAAGGCAACCGGCCGCACCCGCACCCGAAGCGCCGCAGTCGGTGCAGGACAAGCT
CGCCGACCGCTACGGACGCCGCCGGTAG

Upstream 100 bases:

>100_bases
ACAGCAAAGACTTCGAACGCGTCTACACCGTCATCGAGGCCGCGCTGCCCGGCCTGCACGACTGGGTCGACGAACGGCTG
GCGCAGAACGGATCGTCGTG

Downstream 100 bases:

>100_bases
GCGGCCAGCAGCCCGGCCGCCAGGGCCACGGCGGCGGCCTGCACCGCCGCCGACAGCCGCACCGCCCGGCGCAGGTCGGT
CACCGTGGGCTCGCGACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MPRWLRGLSFLLRPGWVVLALVVVAFAYLCFTVLAPWQLGKHSRTSQQNHQIEHSLTTPPVPLKTLLPQQNSAAPAEQWR
QVSATGHYLADVQVLARLRVIDSKPAFEVLAPFVVDGGPTVLVDRGYVRPLEGSRVPPIPRPPADTVTITARLRNSEPAA
GKDPFVGDGVRQVYSIDTEQIAVLTKVPLAGSYLQLVDGQPGGLGVVGVPQLDAGPFLSYGIQWIAFGILAPIGVGYFAY
SELRARRAERQPAAPAPEAPQSVQDKLADRYGRRR

Sequences:

>Translated_275_residues
MPRWLRGLSFLLRPGWVVLALVVVAFAYLCFTVLAPWQLGKHSRTSQQNHQIEHSLTTPPVPLKTLLPQQNSAAPAEQWR
QVSATGHYLADVQVLARLRVIDSKPAFEVLAPFVVDGGPTVLVDRGYVRPLEGSRVPPIPRPPADTVTITARLRNSEPAA
GKDPFVGDGVRQVYSIDTEQIAVLTKVPLAGSYLQLVDGQPGGLGVVGVPQLDAGPFLSYGIQWIAFGILAPIGVGYFAY
SELRARRAERQPAAPAPEAPQSVQDKLADRYGRRR
>Mature_274_residues
PRWLRGLSFLLRPGWVVLALVVVAFAYLCFTVLAPWQLGKHSRTSQQNHQIEHSLTTPPVPLKTLLPQQNSAAPAEQWRQ
VSATGHYLADVQVLARLRVIDSKPAFEVLAPFVVDGGPTVLVDRGYVRPLEGSRVPPIPRPPADTVTITARLRNSEPAAG
KDPFVGDGVRQVYSIDTEQIAVLTKVPLAGSYLQLVDGQPGGLGVVGVPQLDAGPFLSYGIQWIAFGILAPIGVGYFAYS
ELRARRAERQPAAPAPEAPQSVQDKLADRYGRRR

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 29948; Mature: 29817

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRWLRGLSFLLRPGWVVLALVVVAFAYLCFTVLAPWQLGKHSRTSQQNHQIEHSLTTPP
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHCCCCCC
VPLKTLLPQQNSAAPAEQWRQVSATGHYLADVQVLARLRVIDSKPAFEVLAPFVVDGGPT
CCHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCE
VLVDRGYVRPLEGSRVPPIPRPPADTVTITARLRNSEPAAGKDPFVGDGVRQVYSIDTEQ
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHH
IAVLTKVPLAGSYLQLVDGQPGGLGVVGVPQLDAGPFLSYGIQWIAFGILAPIGVGYFAY
EEEEEECCCCCCHHEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SELRARRAERQPAAPAPEAPQSVQDKLADRYGRRR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRWLRGLSFLLRPGWVVLALVVVAFAYLCFTVLAPWQLGKHSRTSQQNHQIEHSLTTPP
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHCCCCCC
VPLKTLLPQQNSAAPAEQWRQVSATGHYLADVQVLARLRVIDSKPAFEVLAPFVVDGGPT
CCHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCE
VLVDRGYVRPLEGSRVPPIPRPPADTVTITARLRNSEPAAGKDPFVGDGVRQVYSIDTEQ
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHH
IAVLTKVPLAGSYLQLVDGQPGGLGVVGVPQLDAGPFLSYGIQWIAFGILAPIGVGYFAY
EEEEEECCCCCCHHEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SELRARRAERQPAAPAPEAPQSVQDKLADRYGRRR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]