Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408079

Identifier: 41408079

GI number: 41408079

Start: 2187546

End: 2188283

Strand: Reverse

Name: 41408079

Synonym: MAP1981c

Alternate gene names: NA

Gene position: 2188283-2187546 (Counterclockwise)

Preceding gene: 41408080

Following gene: 41408078

Centisome position: 45.31

GC content: 70.46

Gene sequence:

>738_bases
ATGAAAGCCGATGTAGCACAGCAGCGTTCACTACTCGAATTGGCGAACGTGGATGCCGAGCTGTCCCGGCTCGCGCACCG
GGCCGAGCATCTGCCCGAGCAGCAGGCCTGCGAGCGGATGCAGCAGGAATACGACGCCGCCGGTGACCGGCTGGGCGCGG
TGCGAATCGCCCTGGAAGACATCGATGCTCACGTGCTGCGGCTGGAAGCCGAAGTCGACGCGGTGCGCCAGCGCGAAGAC
CGCGACCGCTCGCTGCTGCAGTCCGGAGCGATCGACGCCAAGCAGCTGGCCGACCTTCAGCACGAGCTCGAGACACTGCA
GCGTCGCCAGACCAGCCTGGAGGATTCGCTGCTGGAGGTGATGGAGCGCCGCGAGGAGCTGCAGGCCCAGCTGGACGGGG
AGCAGCAGGCGCTCAAGGAGCTGGAAGCCGAGATGGCCACCGCGCGGCGCGATCTGGACGCCGCGCGCGGCGAGATCAGC
GAGTCCCGTGCGCTGCATTCGTCGCGGCGCGACGCGCTGAGCGCCGAACTGGACCCCGAGCTGTTCGCCCTCTACGAACG
GCAACGCGCCCGGGGAGGGCCGGGCGCCGGGCAGCTGCTGGGGCGGCGGTGCGGGGCCTGCCGGCTGGAAATCGACCGCG
GGGAGCTGTCCCGGATCTCGGCGGCCGCCGAGGACGACGTGGTGCGGTGCCCGGAATGCGGGGCGATTCTGCTGCGGGTC
AAGGGGTCCGGTCAGTGA

Upstream 100 bases:

>100_bases
CCGACCTGCTGCGGTCCCGGTTCGGTGAACGGCTCGACGTGCGGGTGAGCGCGATTCGCACCGACCCGTGGAATGTCGGG
CACGACGGGGGTGAGGGATG

Downstream 100 bases:

>100_bases
AGGTCGTCATCGAAGCCGACGGGGGATCGCGCGGCAACCCCGGCCCGGCCGGGTACGGCGCCGTGGTGTGGACACCGGAC
CGCGGCACCGTGCTGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKADVAQQRSLLELANVDAELSRLAHRAEHLPEQQACERMQQEYDAAGDRLGAVRIALEDIDAHVLRLEAEVDAVRQRED
RDRSLLQSGAIDAKQLADLQHELETLQRRQTSLEDSLLEVMERREELQAQLDGEQQALKELEAEMATARRDLDAARGEIS
ESRALHSSRRDALSAELDPELFALYERQRARGGPGAGQLLGRRCGACRLEIDRGELSRISAAAEDDVVRCPECGAILLRV
KGSGQ

Sequences:

>Translated_245_residues
MKADVAQQRSLLELANVDAELSRLAHRAEHLPEQQACERMQQEYDAAGDRLGAVRIALEDIDAHVLRLEAEVDAVRQRED
RDRSLLQSGAIDAKQLADLQHELETLQRRQTSLEDSLLEVMERREELQAQLDGEQQALKELEAEMATARRDLDAARGEIS
ESRALHSSRRDALSAELDPELFALYERQRARGGPGAGQLLGRRCGACRLEIDRGELSRISAAAEDDVVRCPECGAILLRV
KGSGQ
>Mature_245_residues
MKADVAQQRSLLELANVDAELSRLAHRAEHLPEQQACERMQQEYDAAGDRLGAVRIALEDIDAHVLRLEAEVDAVRQRED
RDRSLLQSGAIDAKQLADLQHELETLQRRQTSLEDSLLEVMERREELQAQLDGEQQALKELEAEMATARRDLDAARGEIS
ESRALHSSRRDALSAELDPELFALYERQRARGGPGAGQLLGRRCGACRLEIDRGELSRISAAAEDDVVRCPECGAILLRV
KGSGQ

Specific function: Unknown

COG id: COG1579

COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003743 [H]

Pfam domain/function: PF02591 DUF164 [H]

EC number: NA

Molecular weight: Translated: 27295; Mature: 27295

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKADVAQQRSLLELANVDAELSRLAHRAEHLPEQQACERMQQEYDAAGDRLGAVRIALED
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IDAHVLRLEAEVDAVRQREDRDRSLLQSGAIDAKQLADLQHELETLQRRQTSLEDSLLEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERREELQAQLDGEQQALKELEAEMATARRDLDAARGEISESRALHSSRRDALSAELDPE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LFALYERQRARGGPGAGQLLGRRCGACRLEIDRGELSRISAAAEDDVVRCPECGAILLRV
HHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEEE
KGSGQ
CCCCC
>Mature Secondary Structure
MKADVAQQRSLLELANVDAELSRLAHRAEHLPEQQACERMQQEYDAAGDRLGAVRIALED
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IDAHVLRLEAEVDAVRQREDRDRSLLQSGAIDAKQLADLQHELETLQRRQTSLEDSLLEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERREELQAQLDGEQQALKELEAEMATARRDLDAARGEISESRALHSSRRDALSAELDPE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LFALYERQRARGGPGAGQLLGRRCGACRLEIDRGELSRISAAAEDDVVRCPECGAILLRV
HHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEEE
KGSGQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]