Click here to switch to the map view.

The map label for this gene is 41408080

Identifier: 41408080

GI number: 41408080

Start: 2188283

End: 2189416

Strand: Reverse

Name: 41408080

Synonym: MAP1982c

Alternate gene names: NA

Gene position: 2189416-2188283 (Counterclockwise)

Preceding gene: 41408081

Following gene: 41408079

Centisome position: 45.33

GC content: 75.04

Gene sequence:

>1134_bases
GTGAGCGTGAAACTCGCCGACGTCATCGCGGTGCTCGACCAGGCCTACCCGCCGTGGCTGGCCGAGCCCTGGGATTCGGT
GGGGCTGGTCTGCGGTGACCCCGACGAACCGGTGGAGTCGGTGACCGTGGCGGTGGACGCGACACCCGCGGTGGTCGACG
AGGTTCCGGCCGGCGGGCTGCTGCTGGCCCACCACCCGCTGCTGCTGCGCGGGGTGGACACGGTCGCGGCCAGCACGCCC
AAGGGTGCGCTGGTGCACCGGCTGATCCGCAGCGGGCGGTCGCTGTTCACCGCGCACACCAACGCCGACTCGGCGTCGCC
CGGCGTCTCCGACGCGCTGGCCGAGGCGCTGGGCCTGACCGTCGAGGCCGTGCTGGAGCCGGCCCGGCCCGCCTCCGATC
TGGACAAGTGGGTCATCTACGTGCCCGGCGAAAACGCGGACGCGGTGCGGGAAGCCGTCTTCGCCGCCGGCGCGGGCCAT
ATCGGCGACTACTCGCATTGCAGCTGGAGTGTCACCGGCATCGGGCAGTTCCTGCCCCACGAGGGCGCCTCGCCCGCGCT
GGGCAGCGTCGGCCAGGTGGAACGGGTGGCCGAGGAACGGGTCGAGGTGGTGGCCCCCGCGCGGGCCCGGGCCGCGGTGC
TGACCGCCATGCGCGCCGCCCACCCCTACGAGGAGCCCGCGTTCGACATCTTCGCGTTGCTGCCCCCGCCCGGCGACGCC
GGGCTGGGCCGCATCGGGCGGCTTCCGCAGCCGGAGCCGTTGCGGCGCTTCGTGTCCCGCGTCGACGCGGCGCTGCCGGC
GACGTCCTGGGGAGTGCGGGCGGCGGGCGACCCGGAACTGGCGGTGTCGCGGGTCGCGGTGTGCGGCGGGGCCGGCGATT
CGCTGCTGGCCGCCGCGGCCGGCGCCGGCGTGCAGGCCTACCTCACCGCCGACCTGCGCCACCACCCGGCCGACGAGCAT
CGCCGGGCCTCCGAGGTGGCCCTGATCGACGTGGCGCACTGGGCCAGCGAATTCCCCTGGTGCGCCCAGGCCGCCGACCT
GCTGCGGTCCCGGTTCGGTGAACGGCTCGACGTGCGGGTGAGCGCGATTCGCACCGACCCGTGGAATGTCGGGCACGACG
GGGGTGAGGGATGA

Upstream 100 bases:

>100_bases
GTCGCGGTGACACGTTCGTCGGCCTGGACGAGCGGTACCTGCGCGCCGCGGTGCGCCCGGAGTGGCCGCTGCTGGTGCAG
GCGATCGCGGAGGTGCAGCG

Downstream 100 bases:

>100_bases
TGAAAGCCGATGTAGCACAGCAGCGTTCACTACTCGAATTGGCGAACGTGGATGCCGAGCTGTCCCGGCTCGCGCACCGG
GCCGAGCATCTGCCCGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSVKLADVIAVLDQAYPPWLAEPWDSVGLVCGDPDEPVESVTVAVDATPAVVDEVPAGGLLLAHHPLLLRGVDTVAASTP
KGALVHRLIRSGRSLFTAHTNADSASPGVSDALAEALGLTVEAVLEPARPASDLDKWVIYVPGENADAVREAVFAAGAGH
IGDYSHCSWSVTGIGQFLPHEGASPALGSVGQVERVAEERVEVVAPARARAAVLTAMRAAHPYEEPAFDIFALLPPPGDA
GLGRIGRLPQPEPLRRFVSRVDAALPATSWGVRAAGDPELAVSRVAVCGGAGDSLLAAAAGAGVQAYLTADLRHHPADEH
RRASEVALIDVAHWASEFPWCAQAADLLRSRFGERLDVRVSAIRTDPWNVGHDGGEG

Sequences:

>Translated_377_residues
MSVKLADVIAVLDQAYPPWLAEPWDSVGLVCGDPDEPVESVTVAVDATPAVVDEVPAGGLLLAHHPLLLRGVDTVAASTP
KGALVHRLIRSGRSLFTAHTNADSASPGVSDALAEALGLTVEAVLEPARPASDLDKWVIYVPGENADAVREAVFAAGAGH
IGDYSHCSWSVTGIGQFLPHEGASPALGSVGQVERVAEERVEVVAPARARAAVLTAMRAAHPYEEPAFDIFALLPPPGDA
GLGRIGRLPQPEPLRRFVSRVDAALPATSWGVRAAGDPELAVSRVAVCGGAGDSLLAAAAGAGVQAYLTADLRHHPADEH
RRASEVALIDVAHWASEFPWCAQAADLLRSRFGERLDVRVSAIRTDPWNVGHDGGEG
>Mature_376_residues
SVKLADVIAVLDQAYPPWLAEPWDSVGLVCGDPDEPVESVTVAVDATPAVVDEVPAGGLLLAHHPLLLRGVDTVAASTPK
GALVHRLIRSGRSLFTAHTNADSASPGVSDALAEALGLTVEAVLEPARPASDLDKWVIYVPGENADAVREAVFAAGAGHI
GDYSHCSWSVTGIGQFLPHEGASPALGSVGQVERVAEERVEVVAPARARAAVLTAMRAAHPYEEPAFDIFALLPPPGDAG
LGRIGRLPQPEPLRRFVSRVDAALPATSWGVRAAGDPELAVSRVAVCGGAGDSLLAAAAGAGVQAYLTADLRHHPADEHR
RASEVALIDVAHWASEFPWCAQAADLLRSRFGERLDVRVSAIRTDPWNVGHDGGEG

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 39326; Mature: 39194

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKLADVIAVLDQAYPPWLAEPWDSVGLVCGDPDEPVESVTVAVDATPAVVDEVPAGGL
CCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCHHHHHCCCCCCE
LLAHHPLLLRGVDTVAASTPKGALVHRLIRSGRSLFTAHTNADSASPGVSDALAEALGLT
EEECCCHHHHCHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCH
VEAVLEPARPASDLDKWVIYVPGENADAVREAVFAAGAGHIGDYSHCSWSVTGIGQFLPH
HHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHCCC
EGASPALGSVGQVERVAEERVEVVAPARARAAVLTAMRAAHPYEEPAFDIFALLPPPGDA
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
GLGRIGRLPQPEPLRRFVSRVDAALPATSWGVRAAGDPELAVSRVAVCGGAGDSLLAAAA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
GAGVQAYLTADLRHHPADEHRRASEVALIDVAHWASEFPWCAQAADLLRSRFGERLDVRV
CCCEEEEEEECHHCCCCHHHHHHHHEEEEEHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
SAIRTDPWNVGHDGGEG
EEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SVKLADVIAVLDQAYPPWLAEPWDSVGLVCGDPDEPVESVTVAVDATPAVVDEVPAGGL
CCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCHHHHHCCCCCCE
LLAHHPLLLRGVDTVAASTPKGALVHRLIRSGRSLFTAHTNADSASPGVSDALAEALGLT
EEECCCHHHHCHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCH
VEAVLEPARPASDLDKWVIYVPGENADAVREAVFAAGAGHIGDYSHCSWSVTGIGQFLPH
HHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHCCC
EGASPALGSVGQVERVAEERVEVVAPARARAAVLTAMRAAHPYEEPAFDIFALLPPPGDA
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
GLGRIGRLPQPEPLRRFVSRVDAALPATSWGVRAAGDPELAVSRVAVCGGAGDSLLAAAA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
GAGVQAYLTADLRHHPADEHRRASEVALIDVAHWASEFPWCAQAADLLRSRFGERLDVRV
CCCEEEEEEECHHCCCCHHHHHHHHEEEEEHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
SAIRTDPWNVGHDGGEG
EEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]