| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408067
Identifier: 41408067
GI number: 41408067
Start: 2176106
End: 2177497
Strand: Reverse
Name: 41408067
Synonym: MAP1969c
Alternate gene names: NA
Gene position: 2177497-2176106 (Counterclockwise)
Preceding gene: 41408070
Following gene: 41408066
Centisome position: 45.08
GC content: 68.68
Gene sequence:
>1392_bases ATGCAGCGGCTGAGTGGACTCGACGCCAGCTTCCTGTACCTGGAGACCTCGTCGCAGCCCATGCATGTGTGTTCGATCAT CGAGCTGGACACCTCGACGGTGCCGGGCGGCTACACCTTCGAGCGGCTGCGTGACGCCCTGGTGCGCCGCATCCGGGCGA TTCCGCCGTTTCGGGAAAAACTCGCCGACAGCCCGCTGAATCTGGACCATCCGGTCTGGGTGGACGACGAGGACTTCGAC ATCGACCGTCATCTGCACCGCATCGCCGTGCCGGCGCCGGGCGGGCGTGCCGAGCTGTCGCAGATCTGCGGCCACATCGC CCAGACGCCGCTGGACCGCCGCCGGCCGCTATGGGAGATGTGGGTGATCGAGGGCGTGGCCGGCACCGACTGCCACCGGG ACGGGCGGCTGGCGGTGATGACCAAGGTGCACCACGCCGGCGTCGACGGGGTGACCGGCGCCAACCTGATGTCGCAGCTG TGCGCGACCGAGCCCGACGCCGCGGCGCCGGAACCGGCCGCGGGCGTCGGCGGCGGCGCCGGGTGGCGGATCGCCGCCGG CGGCCTGGTCAGCTTCGCGGCCCGGCCGCTGCGGCTGGCCAACGTGGTGCCCGACACCGTGTCGTCGGTGCTGGCCACGG TGCGACGGGCGCTCGACGGCGCGGCGATGGCCCGCCCGTTCGCGGCGCCGGCGACCGTGTTCAACGCCCGGATCAGCAAC CGGCGCTGCATCGCATATGCCGAATTGAATCTCGACGACGTCAAAGCGGTGAAGAACCATTTCGGTGTCAAAGTCAACGA CGTGGTGATGGCCCTGGTTTCCGGCGTGCTGCGCCAATATCTGGCGGAGCGAAACGCATTGCCGAATTCGTCGCTGGTGG CCTCGGTCCCGATTTCCGTGCACGGCAAATCCGGCCGGCCCGGCCGAAATCAGGTGTCGGCCATGTTCGCGTCCCTGCAC ACCGAAATCGCCGACCCGGTGCAGCGGCTGAAAGCGATCGCGCACGCGAATTCGGTTGCCAAAGAACACAGTTCGGCGAT CGGGGCGTCATTGCTGCAGGATTGGACGCAATTCGCGGCGCCGGCGGTGTTCGGCATCGCGATGCGGCTCTACGCGCGGA CCCGGTTCACCGACAGCATGCCGGTGCACAACTTGGTGGTCTCCAACGTGCCCGGGCCGCAGGTTCCGCTGTACCTGCTG GGCTGCGAGGTCAAGGCGATGTATCCGCTGGGGCCGATCTTTCACGGCTCCGGGCTCAACATCACCGCCATGTCGTTGCG GGGCAAGCTGGACGTCGGGCTGATCGGCTGCCCGGACCTGGTGCCGGACCTGTGGGAGCTGGCCGACGAGTTCGCGGTGG CGATGGAGGAGCTGCGAGCGGCGGCGCGGTAG
Upstream 100 bases:
>100_bases GATCCTGAGCGGGTCCCCGGGTTCGTCTGACGGGTGTCATTCTGCCATTTCTTTTGCGCAGTCGCACCGCTGCGGCGGTG TGAGACATACCATGCTGCGC
Downstream 100 bases:
>100_bases CCGGGCCGCGGTGCCGCTGATCAGGATCCCAAGTTTCCTCTGGCAGCATATGTGGGCATGGGCCTGTCTCGTCGCGGTAA GAGCGCGCGCACGCTGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Putative triacylglycerol synthase Rv1760/MT1809 [H]
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MQRLSGLDASFLYLETSSQPMHVCSIIELDTSTVPGGYTFERLRDALVRRIRAIPPFREKLADSPLNLDHPVWVDDEDFD IDRHLHRIAVPAPGGRAELSQICGHIAQTPLDRRRPLWEMWVIEGVAGTDCHRDGRLAVMTKVHHAGVDGVTGANLMSQL CATEPDAAAPEPAAGVGGGAGWRIAAGGLVSFAARPLRLANVVPDTVSSVLATVRRALDGAAMARPFAAPATVFNARISN RRCIAYAELNLDDVKAVKNHFGVKVNDVVMALVSGVLRQYLAERNALPNSSLVASVPISVHGKSGRPGRNQVSAMFASLH TEIADPVQRLKAIAHANSVAKEHSSAIGASLLQDWTQFAAPAVFGIAMRLYARTRFTDSMPVHNLVVSNVPGPQVPLYLL GCEVKAMYPLGPIFHGSGLNITAMSLRGKLDVGLIGCPDLVPDLWELADEFAVAMEELRAAAR
Sequences:
>Translated_463_residues MQRLSGLDASFLYLETSSQPMHVCSIIELDTSTVPGGYTFERLRDALVRRIRAIPPFREKLADSPLNLDHPVWVDDEDFD IDRHLHRIAVPAPGGRAELSQICGHIAQTPLDRRRPLWEMWVIEGVAGTDCHRDGRLAVMTKVHHAGVDGVTGANLMSQL CATEPDAAAPEPAAGVGGGAGWRIAAGGLVSFAARPLRLANVVPDTVSSVLATVRRALDGAAMARPFAAPATVFNARISN RRCIAYAELNLDDVKAVKNHFGVKVNDVVMALVSGVLRQYLAERNALPNSSLVASVPISVHGKSGRPGRNQVSAMFASLH TEIADPVQRLKAIAHANSVAKEHSSAIGASLLQDWTQFAAPAVFGIAMRLYARTRFTDSMPVHNLVVSNVPGPQVPLYLL GCEVKAMYPLGPIFHGSGLNITAMSLRGKLDVGLIGCPDLVPDLWELADEFAVAMEELRAAAR >Mature_463_residues MQRLSGLDASFLYLETSSQPMHVCSIIELDTSTVPGGYTFERLRDALVRRIRAIPPFREKLADSPLNLDHPVWVDDEDFD IDRHLHRIAVPAPGGRAELSQICGHIAQTPLDRRRPLWEMWVIEGVAGTDCHRDGRLAVMTKVHHAGVDGVTGANLMSQL CATEPDAAAPEPAAGVGGGAGWRIAAGGLVSFAARPLRLANVVPDTVSSVLATVRRALDGAAMARPFAAPATVFNARISN RRCIAYAELNLDDVKAVKNHFGVKVNDVVMALVSGVLRQYLAERNALPNSSLVASVPISVHGKSGRPGRNQVSAMFASLH TEIADPVQRLKAIAHANSVAKEHSSAIGASLLQDWTQFAAPAVFGIAMRLYARTRFTDSMPVHNLVVSNVPGPQVPLYLL GCEVKAMYPLGPIFHGSGLNITAMSLRGKLDVGLIGCPDLVPDLWELADEFAVAMEELRAAAR
Specific function: Upon expression in E.coli functions weakly as a triacylglycerol synthase, making triacylglycerol (TG) from diolein and long-chain fatty acyl-CoA. Has very weak wax synthase activity, incorporating palmityl alcohol into wax esters in the presence of palmit
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the long-chain O-acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014292 - InterPro: IPR004255 [H]
Pfam domain/function: PF03007 UPF0089 [H]
EC number: =2.3.1.20 [H]
Molecular weight: Translated: 49758; Mature: 49758
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLSGLDASFLYLETSSQPMHVCSIIELDTSTVPGGYTFERLRDALVRRIRAIPPFREK CCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH LADSPLNLDHPVWVDDEDFDIDRHLHRIAVPAPGGRAELSQICGHIAQTPLDRRRPLWEM HCCCCCCCCCCEECCCCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHCCHHHCCCHHHH WVIEGVAGTDCHRDGRLAVMTKVHHAGVDGVTGANLMSQLCATEPDAAAPEPAAGVGGGA HHCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC GWRIAAGGLVSFAARPLRLANVVPDTVSSVLATVRRALDGAAMARPFAAPATVFNARISN CCEEECCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC RRCIAYAELNLDDVKAVKNHFGVKVNDVVMALVSGVLRQYLAERNALPNSSLVASVPISV CEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEE HGKSGRPGRNQVSAMFASLHTEIADPVQRLKAIAHANSVAKEHSSAIGASLLQDWTQFAA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAVFGIAMRLYARTRFTDSMPVHNLVVSNVPGPQVPLYLLGCEVKAMYPLGPIFHGSGLN HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEECCEEEECCCCCEEECCCCC ITAMSLRGKLDVGLIGCPDLVPDLWELADEFAVAMEELRAAAR EEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQRLSGLDASFLYLETSSQPMHVCSIIELDTSTVPGGYTFERLRDALVRRIRAIPPFREK CCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH LADSPLNLDHPVWVDDEDFDIDRHLHRIAVPAPGGRAELSQICGHIAQTPLDRRRPLWEM HCCCCCCCCCCEECCCCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHCCHHHCCCHHHH WVIEGVAGTDCHRDGRLAVMTKVHHAGVDGVTGANLMSQLCATEPDAAAPEPAAGVGGGA HHCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC GWRIAAGGLVSFAARPLRLANVVPDTVSSVLATVRRALDGAAMARPFAAPATVFNARISN CCEEECCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC RRCIAYAELNLDDVKAVKNHFGVKVNDVVMALVSGVLRQYLAERNALPNSSLVASVPISV CEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEE HGKSGRPGRNQVSAMFASLHTEIADPVQRLKAIAHANSVAKEHSSAIGASLLQDWTQFAA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAVFGIAMRLYARTRFTDSMPVHNLVVSNVPGPQVPLYLLGCEVKAMYPLGPIFHGSGLN HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEECCEEEECCCCCEEECCCCC ITAMSLRGKLDVGLIGCPDLVPDLWELADEFAVAMEELRAAAR EEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]