| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yuaR [C]
Identifier: 41408066
GI number: 41408066
Start: 2174492
End: 2176054
Strand: Reverse
Name: yuaR [C]
Synonym: MAP1968c
Alternate gene names: 41408066
Gene position: 2176054-2174492 (Counterclockwise)
Preceding gene: 41408067
Following gene: 41408065
Centisome position: 45.05
GC content: 68.84
Gene sequence:
>1563_bases GTGGGCATGGGCCTGTCTCGTCGCGGTAAGAGCGCGCGCACGCTGCTGATCTGGATGTCGATCGCCGCGGTCGCGTTGCT GTTGGCGGGCTGCGTCCGGGTGGTGGTGGGACGCGCCGTCATGTCCGGGCCCAAGCTGGGCCAGGCCGTGGAGTGGACGC CGTGCCGGGCCGCCAACCCGAAGGTCAAACTGCCCGCCGGCGCGCTGTGCGGCAAGCTGGCCGTCCCGGTCGACTACGAC CACCTCGACGGCGACGTGGCGACGCTGGCGATGATCCGTTTCCCTGCCACCGGGGACAAGATCGGTTCGCTGGTGATCAA CCCCGGCGGGCCGGGGGAGTCGGGCATCGAGGCGGCGCTGGGCGTCGTGCAGTCGTTGCCCAAGCGGGTCCGCGAACGCT TCGACCTGGTCGGTTTCGACCCGCGCGGGGTGGGCGCGTCGCGCCCGGCGGTCTGGTGCAACTCCGACGCTGACAACGAC CGGCTGCGCACCGAGCCCAACGTCGACTACAGCCCGGCCGGGGTGGCCCACATCGAGGACGAAACCAAACAGTTCGTCGG CCGGTGCGTCGACAAGATGGGCAAGAAGTTTCTGGCCAACGTCGGGACCGTCAACGTCGCCCGCGACCTCGACGCGATCC GCGCGGCGCTGGGCGATGACAAGCTGACCTACCTCGGCTACTCCTACGGCACCCGGATCGGCTCGGCCTACGCCGAGGCC TACCCGCACAACGTGCGGGCGATGATCCTCGACGGCGCCGTCGACCCCAACGCCGACCAGATCGAAGCCGATCTGCGGCA GGCCAAGGGATTCCAGGACGCGTTCAACAACTTCGCCGCCGAATGCGCCAAGCAACCGAACTGCCCGCTGGGCACCGACC CGGCCAAAGCCGTCGACGTCTACCACAGCCTGGTGGACCCGATGGTCGATCCCGACAACCCGATGGTCGGCCGGCCCATC CCGACGAATGACCCACGCGGACTGAGCTATAGCGATGCCATCGTCGGCACCATCATGGCGTTGTACTCACCCAACCTGTG GCACCACCTGACCGACGGGCTGTCCGAACTCGTCGACCACCACGGCGACACCCTGCTCGCCCTGGCCGACATGTACATGC GCCGCGACGCGCACGGCCACTACACCAACGCCACCGACGCGCGGGTGGCGATCAACTGCGTGGACCAGCCGCCGATCACC GACCGCGCCAAGGTGATCGACGAAGACCGCCGCTCCCGGGAGATCGCGCCGTTCATGAGCTACGGGCAGTTCACCGGCAA CGCGCCGCTGGGTACCTGCGCGTTCTGGCCGGTGCCGCCGACCAGCAAGCCGCACACCATCTCCGCGCCCGGGCTGGCGC CCACCGTGGTGGTGTCGACGACGCACGATCCGGCGACGCCGTACAAGGCCGGGGTGGATCTGGCCAACGAGTTGCGCAGC TCGCTGCTGACCTACGACGGAACGCAGCACACCGTGGTGTTCCAGGGTGACGGCTGCATCGACAACTACGTGACGGCCTA TCTGGTCGGCGGCACCATCCCGCCCAGCGGCGCCAAGTGCTGA
Upstream 100 bases:
>100_bases CGACGAGTTCGCGGTGGCGATGGAGGAGCTGCGAGCGGCGGCGCGGTAGCCGGGCCGCGGTGCCGCTGATCAGGATCCCA AGTTTCCTCTGGCAGCATAT
Downstream 100 bases:
>100_bases CGCCCCAGGTTTCGCCGAACGTGCACTGGCGGCGAGCTTCTCGCGGATTTTTCGCGCTGAGTGCACGTTCGGCGGCGGCC GGCTCGGCGGCCCGGCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MGMGLSRRGKSARTLLIWMSIAAVALLLAGCVRVVVGRAVMSGPKLGQAVEWTPCRAANPKVKLPAGALCGKLAVPVDYD HLDGDVATLAMIRFPATGDKIGSLVINPGGPGESGIEAALGVVQSLPKRVRERFDLVGFDPRGVGASRPAVWCNSDADND RLRTEPNVDYSPAGVAHIEDETKQFVGRCVDKMGKKFLANVGTVNVARDLDAIRAALGDDKLTYLGYSYGTRIGSAYAEA YPHNVRAMILDGAVDPNADQIEADLRQAKGFQDAFNNFAAECAKQPNCPLGTDPAKAVDVYHSLVDPMVDPDNPMVGRPI PTNDPRGLSYSDAIVGTIMALYSPNLWHHLTDGLSELVDHHGDTLLALADMYMRRDAHGHYTNATDARVAINCVDQPPIT DRAKVIDEDRRSREIAPFMSYGQFTGNAPLGTCAFWPVPPTSKPHTISAPGLAPTVVVSTTHDPATPYKAGVDLANELRS SLLTYDGTQHTVVFQGDGCIDNYVTAYLVGGTIPPSGAKC
Sequences:
>Translated_520_residues MGMGLSRRGKSARTLLIWMSIAAVALLLAGCVRVVVGRAVMSGPKLGQAVEWTPCRAANPKVKLPAGALCGKLAVPVDYD HLDGDVATLAMIRFPATGDKIGSLVINPGGPGESGIEAALGVVQSLPKRVRERFDLVGFDPRGVGASRPAVWCNSDADND RLRTEPNVDYSPAGVAHIEDETKQFVGRCVDKMGKKFLANVGTVNVARDLDAIRAALGDDKLTYLGYSYGTRIGSAYAEA YPHNVRAMILDGAVDPNADQIEADLRQAKGFQDAFNNFAAECAKQPNCPLGTDPAKAVDVYHSLVDPMVDPDNPMVGRPI PTNDPRGLSYSDAIVGTIMALYSPNLWHHLTDGLSELVDHHGDTLLALADMYMRRDAHGHYTNATDARVAINCVDQPPIT DRAKVIDEDRRSREIAPFMSYGQFTGNAPLGTCAFWPVPPTSKPHTISAPGLAPTVVVSTTHDPATPYKAGVDLANELRS SLLTYDGTQHTVVFQGDGCIDNYVTAYLVGGTIPPSGAKC >Mature_519_residues GMGLSRRGKSARTLLIWMSIAAVALLLAGCVRVVVGRAVMSGPKLGQAVEWTPCRAANPKVKLPAGALCGKLAVPVDYDH LDGDVATLAMIRFPATGDKIGSLVINPGGPGESGIEAALGVVQSLPKRVRERFDLVGFDPRGVGASRPAVWCNSDADNDR LRTEPNVDYSPAGVAHIEDETKQFVGRCVDKMGKKFLANVGTVNVARDLDAIRAALGDDKLTYLGYSYGTRIGSAYAEAY PHNVRAMILDGAVDPNADQIEADLRQAKGFQDAFNNFAAECAKQPNCPLGTDPAKAVDVYHSLVDPMVDPDNPMVGRPIP TNDPRGLSYSDAIVGTIMALYSPNLWHHLTDGLSELVDHHGDTLLALADMYMRRDAHGHYTNATDARVAINCVDQPPITD RAKVIDEDRRSREIAPFMSYGQFTGNAPLGTCAFWPVPPTSKPHTISAPGLAPTVVVSTTHDPATPYKAGVDLANELRSS LLTYDGTQHTVVFQGDGCIDNYVTAYLVGGTIPPSGAKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 55487; Mature: 55355
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMGLSRRGKSARTLLIWMSIAAVALLLAGCVRVVVGRAVMSGPKLGQAVEWTPCRAANP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC KVKLPAGALCGKLAVPVDYDHLDGDVATLAMIRFPATGDKIGSLVINPGGPGESGIEAAL CEECCHHHHHCCEECCCCCCCCCCCHHEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHH GVVQSLPKRVRERFDLVGFDPRGVGASRPAVWCNSDADNDRLRTEPNVDYSPAGVAHIED HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEECHH ETKQFVGRCVDKMGKKFLANVGTVNVARDLDAIRAALGDDKLTYLGYSYGTRIGSAYAEA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH YPHNVRAMILDGAVDPNADQIEADLRQAKGFQDAFNNFAAECAKQPNCPLGTDPAKAVDV CCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH YHSLVDPMVDPDNPMVGRPIPTNDPRGLSYSDAIVGTIMALYSPNLWHHLTDGLSELVDH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HGDTLLALADMYMRRDAHGHYTNATDARVAINCVDQPPITDRAKVIDEDRRSREIAPFMS CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHH YGQFTGNAPLGTCAFWPVPPTSKPHTISAPGLAPTVVVSTTHDPATPYKAGVDLANELRS HCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH SLLTYDGTQHTVVFQGDGCIDNYVTAYLVGGTIPPSGAKC HHHCCCCCCEEEEEECCCCHHHHHHHHEECCCCCCCCCCC >Mature Secondary Structure GMGLSRRGKSARTLLIWMSIAAVALLLAGCVRVVVGRAVMSGPKLGQAVEWTPCRAANP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC KVKLPAGALCGKLAVPVDYDHLDGDVATLAMIRFPATGDKIGSLVINPGGPGESGIEAAL CEECCHHHHHCCEECCCCCCCCCCCHHEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHH GVVQSLPKRVRERFDLVGFDPRGVGASRPAVWCNSDADNDRLRTEPNVDYSPAGVAHIED HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEECHH ETKQFVGRCVDKMGKKFLANVGTVNVARDLDAIRAALGDDKLTYLGYSYGTRIGSAYAEA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH YPHNVRAMILDGAVDPNADQIEADLRQAKGFQDAFNNFAAECAKQPNCPLGTDPAKAVDV CCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH YHSLVDPMVDPDNPMVGRPIPTNDPRGLSYSDAIVGTIMALYSPNLWHHLTDGLSELVDH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HGDTLLALADMYMRRDAHGHYTNATDARVAINCVDQPPITDRAKVIDEDRRSREIAPFMS CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHH YGQFTGNAPLGTCAFWPVPPTSKPHTISAPGLAPTVVVSTTHDPATPYKAGVDLANELRS HCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH SLLTYDGTQHTVVFQGDGCIDNYVTAYLVGGTIPPSGAKC HHHCCCCCCEEEEEECCCCHHHHHHHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]