Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is yuaR [C]

Identifier: 41408065

GI number: 41408065

Start: 2172773

End: 2174341

Strand: Reverse

Name: yuaR [C]

Synonym: MAP1967c

Alternate gene names: 41408065

Gene position: 2174341-2172773 (Counterclockwise)

Preceding gene: 41408066

Following gene: 41408064

Centisome position: 45.02

GC content: 71.7

Gene sequence:

>1569_bases
ATGACAGCCATGTCGCGCCTGAGATCGTTGAGCTCGGCGCTGCTCTCATTCGGCCTCGTCCTCGGTGGAACGTCGGGCGT
CGGGTTGCCGGTGGCCGGCGCCACCCCGGAGCCCGGCGCCGGCCAGACCCCGGCGCCGAATCCGCCGGCGGCCGCGGCGC
CGCAGGGCTGGGGGAGCTGCAGCCAATTCGTTACGGACACAAGCGATATCCCGACCGCGCAGTGCACCACGGTGTCGGTC
CCGATCGACTACAACAACCCCGGCGCCGGGCAGGCCAAGCTCGCCGTGATCCGGGTACCGGCGACCGGTCAGCGGCTGGG
CTCGCTGCTGGTCAACCCCGGCGGCCCGGGCGGCTCGGCCGTCGACATGGTGGCCGCGATGGCCTCCGACATGGACAACT
CGGCCATCCGGCGCAGCTTCGACCTGGTCGGCTTCGACCCGCGCGGGGTGGGCCACTCGACACCGCCGCTGCGGTGTCGC
ACCGACGCCGAGTTCGACGCCTACCGGCGCGAACCCATGGTCGACTACAGCCCGGCCGGGGTGGCCCACATCGAGCAGCT
CTACCGGCAGCTGGCCCAGCAGTGCGTCAACCGGATGGGCACCGCGTTCCTGGCCAACGCTGGCACCGCCTCGGTCGCCC
GCGACATGGACGCGGTGCGCCAGGCGCTCGGCGACGAGCAGATCAACTACCTGGGCTACAGCTACGGCACCGAGCTGGGC
ACCGCGTACCTGGAGAAGTTCAGCAACCACGTGCGGGCGATGGTGCTCGACGGCGCCATCGACCCGACCGTCGGGCCGGT
CGACGAGAACATCAACCAAATGGCCGGATTCCAAACGGCTTTCAACGACTACGCCACCGACTGCGCCCGCTCGCCGGGCT
GCCCGCTGGGCACCGACCCGGCGCAGTTCGTCAACCGCTACCACGCCCTGGTCGACCCGCTGGTCACCCGGCCGGGCCGC
ACCGCCGACCCGCGAGGGCTGAGCTACGCCGACGCCACCACCGGCACCATCAACGCCCTCTACACGCCGGCGCACTGGAA
GTACCTGACCAGCGGTCTGCTCGGGCTGGCGCGCGGCACCGACGCCGGCGATCTGCTGGCGCTCGCCGACGACTATCAGG
GCCGCGACCGCAACGGCCACTACTCCAACGACCAGGACGCGTTCAACGCGGTCCGCTGCGTCGACGCCCCGAACCCGACC
GACCAGGCCAGCTGGGTGAGCGCCGACCAGAAGATCCGCCAGGCCGCGCCGTTTTTGAGCTACGGGCCGTTCACCGGCAA
CGCGCCCCGCGACCTGTGCGCGCTGTGGCCGGTGCCGGCGACGTCGGCGCCGCACGCCGCCCCGCCGATGCCCGCGGGCA
AGGTCGTCGTCGTCTCCACCACGCACGACCCGGCCACGCCGTATCAGGCCGGGGTGAATCTGGCCCGCCAGCTCGGCGGC
CCGCTGATCACCTACGACGGGACGCAGCACACCGCGGTGTTCAACGGCGACCAGTGCGTGGACAACGCCGTGGTGCGCTA
TTTCGTCGCCGGCACGCCGCCGCCGGCGTCGTATCGCTGCCAGTCCTGA

Upstream 100 bases:

>100_bases
TTCGCGCTGAGTGCACGTTCGGCGGCGGCCGGCTCGGCGGCCCGGCCCGAGACCAAGGCGTAACCGTTTCGCGCTGCCAC
GGGTATCCGGGGCTGCAACG

Downstream 100 bases:

>100_bases
CCAGCGCCGCACGCCCCACCGCAACGGTTCTGAGCGGGCATCGGTAACACAGAATTAACAGCGGTTGCCTACTGTTCGAG
ATATGGATCGACAGAAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MTAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSCSQFVTDTSDIPTAQCTTVSV
PIDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSAVDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCR
TDAEFDAYRREPMVDYSPAGVAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELG
TAYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDPAQFVNRYHALVDPLVTRPGR
TADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGTDAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPT
DQASWVSADQKIRQAAPFLSYGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGG
PLITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS

Sequences:

>Translated_522_residues
MTAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSCSQFVTDTSDIPTAQCTTVSV
PIDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSAVDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCR
TDAEFDAYRREPMVDYSPAGVAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELG
TAYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDPAQFVNRYHALVDPLVTRPGR
TADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGTDAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPT
DQASWVSADQKIRQAAPFLSYGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGG
PLITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS
>Mature_521_residues
TAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSCSQFVTDTSDIPTAQCTTVSVP
IDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSAVDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCRT
DAEFDAYRREPMVDYSPAGVAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELGT
AYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDPAQFVNRYHALVDPLVTRPGRT
ADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGTDAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPTD
QASWVSADQKIRQAAPFLSYGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGGP
LITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR013595 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF08386 Abhydrolase_4 [H]

EC number: NA

Molecular weight: Translated: 54782; Mature: 54650

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSC
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
SQFVTDTSDIPTAQCTTVSVPIDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSA
HHHHCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHEEECCCCCCCHH
VDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCRTDAEFDAYRREPMVDYSPAG
HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCCC
VAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELG
HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHH
TAYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDP
HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
AQFVNRYHALVDPLVTRPGRTADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGT
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCC
DAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPTDQASWVSADQKIRQAAPFLS
CCCCEEEEECCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCE
YGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGG
ECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
PLITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS
CEEEECCCCCEEEECCCHHHHHHHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure 
TAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSC
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
SQFVTDTSDIPTAQCTTVSVPIDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSA
HHHHCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHEEECCCCCCCHH
VDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCRTDAEFDAYRREPMVDYSPAG
HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCCC
VAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELG
HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHH
TAYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDP
HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
AQFVNRYHALVDPLVTRPGRTADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGT
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCC
DAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPTDQASWVSADQKIRQAAPFLS
CCCCEEEEECCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCE
YGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGG
ECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
PLITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS
CEEEECCCCCEEEECCCHHHHHHHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]