| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yuaR [C]
Identifier: 41408065
GI number: 41408065
Start: 2172773
End: 2174341
Strand: Reverse
Name: yuaR [C]
Synonym: MAP1967c
Alternate gene names: 41408065
Gene position: 2174341-2172773 (Counterclockwise)
Preceding gene: 41408066
Following gene: 41408064
Centisome position: 45.02
GC content: 71.7
Gene sequence:
>1569_bases ATGACAGCCATGTCGCGCCTGAGATCGTTGAGCTCGGCGCTGCTCTCATTCGGCCTCGTCCTCGGTGGAACGTCGGGCGT CGGGTTGCCGGTGGCCGGCGCCACCCCGGAGCCCGGCGCCGGCCAGACCCCGGCGCCGAATCCGCCGGCGGCCGCGGCGC CGCAGGGCTGGGGGAGCTGCAGCCAATTCGTTACGGACACAAGCGATATCCCGACCGCGCAGTGCACCACGGTGTCGGTC CCGATCGACTACAACAACCCCGGCGCCGGGCAGGCCAAGCTCGCCGTGATCCGGGTACCGGCGACCGGTCAGCGGCTGGG CTCGCTGCTGGTCAACCCCGGCGGCCCGGGCGGCTCGGCCGTCGACATGGTGGCCGCGATGGCCTCCGACATGGACAACT CGGCCATCCGGCGCAGCTTCGACCTGGTCGGCTTCGACCCGCGCGGGGTGGGCCACTCGACACCGCCGCTGCGGTGTCGC ACCGACGCCGAGTTCGACGCCTACCGGCGCGAACCCATGGTCGACTACAGCCCGGCCGGGGTGGCCCACATCGAGCAGCT CTACCGGCAGCTGGCCCAGCAGTGCGTCAACCGGATGGGCACCGCGTTCCTGGCCAACGCTGGCACCGCCTCGGTCGCCC GCGACATGGACGCGGTGCGCCAGGCGCTCGGCGACGAGCAGATCAACTACCTGGGCTACAGCTACGGCACCGAGCTGGGC ACCGCGTACCTGGAGAAGTTCAGCAACCACGTGCGGGCGATGGTGCTCGACGGCGCCATCGACCCGACCGTCGGGCCGGT CGACGAGAACATCAACCAAATGGCCGGATTCCAAACGGCTTTCAACGACTACGCCACCGACTGCGCCCGCTCGCCGGGCT GCCCGCTGGGCACCGACCCGGCGCAGTTCGTCAACCGCTACCACGCCCTGGTCGACCCGCTGGTCACCCGGCCGGGCCGC ACCGCCGACCCGCGAGGGCTGAGCTACGCCGACGCCACCACCGGCACCATCAACGCCCTCTACACGCCGGCGCACTGGAA GTACCTGACCAGCGGTCTGCTCGGGCTGGCGCGCGGCACCGACGCCGGCGATCTGCTGGCGCTCGCCGACGACTATCAGG GCCGCGACCGCAACGGCCACTACTCCAACGACCAGGACGCGTTCAACGCGGTCCGCTGCGTCGACGCCCCGAACCCGACC GACCAGGCCAGCTGGGTGAGCGCCGACCAGAAGATCCGCCAGGCCGCGCCGTTTTTGAGCTACGGGCCGTTCACCGGCAA CGCGCCCCGCGACCTGTGCGCGCTGTGGCCGGTGCCGGCGACGTCGGCGCCGCACGCCGCCCCGCCGATGCCCGCGGGCA AGGTCGTCGTCGTCTCCACCACGCACGACCCGGCCACGCCGTATCAGGCCGGGGTGAATCTGGCCCGCCAGCTCGGCGGC CCGCTGATCACCTACGACGGGACGCAGCACACCGCGGTGTTCAACGGCGACCAGTGCGTGGACAACGCCGTGGTGCGCTA TTTCGTCGCCGGCACGCCGCCGCCGGCGTCGTATCGCTGCCAGTCCTGA
Upstream 100 bases:
>100_bases TTCGCGCTGAGTGCACGTTCGGCGGCGGCCGGCTCGGCGGCCCGGCCCGAGACCAAGGCGTAACCGTTTCGCGCTGCCAC GGGTATCCGGGGCTGCAACG
Downstream 100 bases:
>100_bases CCAGCGCCGCACGCCCCACCGCAACGGTTCTGAGCGGGCATCGGTAACACAGAATTAACAGCGGTTGCCTACTGTTCGAG ATATGGATCGACAGAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MTAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSCSQFVTDTSDIPTAQCTTVSV PIDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSAVDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCR TDAEFDAYRREPMVDYSPAGVAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELG TAYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDPAQFVNRYHALVDPLVTRPGR TADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGTDAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPT DQASWVSADQKIRQAAPFLSYGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGG PLITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS
Sequences:
>Translated_522_residues MTAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSCSQFVTDTSDIPTAQCTTVSV PIDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSAVDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCR TDAEFDAYRREPMVDYSPAGVAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELG TAYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDPAQFVNRYHALVDPLVTRPGR TADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGTDAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPT DQASWVSADQKIRQAAPFLSYGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGG PLITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS >Mature_521_residues TAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSCSQFVTDTSDIPTAQCTTVSVP IDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSAVDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCRT DAEFDAYRREPMVDYSPAGVAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELGT AYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDPAQFVNRYHALVDPLVTRPGRT ADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGTDAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPTD QASWVSADQKIRQAAPFLSYGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGGP LITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR013595 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF08386 Abhydrolase_4 [H]
EC number: NA
Molecular weight: Translated: 54782; Mature: 54650
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSC CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SQFVTDTSDIPTAQCTTVSVPIDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSA HHHHCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHEEECCCCCCCHH VDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCRTDAEFDAYRREPMVDYSPAG HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCCC VAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELG HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHH TAYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDP HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH AQFVNRYHALVDPLVTRPGRTADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCC DAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPTDQASWVSADQKIRQAAPFLS CCCCEEEEECCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCE YGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGG ECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC PLITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS CEEEECCCCCEEEECCCHHHHHHHHHHEECCCCCCCCCCCCC >Mature Secondary Structure TAMSRLRSLSSALLSFGLVLGGTSGVGLPVAGATPEPGAGQTPAPNPPAAAAPQGWGSC CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SQFVTDTSDIPTAQCTTVSVPIDYNNPGAGQAKLAVIRVPATGQRLGSLLVNPGGPGGSA HHHHCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHEEECCCCCCCHH VDMVAAMASDMDNSAIRRSFDLVGFDPRGVGHSTPPLRCRTDAEFDAYRREPMVDYSPAG HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCCC VAHIEQLYRQLAQQCVNRMGTAFLANAGTASVARDMDAVRQALGDEQINYLGYSYGTELG HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHH TAYLEKFSNHVRAMVLDGAIDPTVGPVDENINQMAGFQTAFNDYATDCARSPGCPLGTDP HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH AQFVNRYHALVDPLVTRPGRTADPRGLSYADATTGTINALYTPAHWKYLTSGLLGLARGT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCC DAGDLLALADDYQGRDRNGHYSNDQDAFNAVRCVDAPNPTDQASWVSADQKIRQAAPFLS CCCCEEEEECCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCE YGPFTGNAPRDLCALWPVPATSAPHAAPPMPAGKVVVVSTTHDPATPYQAGVNLARQLGG ECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC PLITYDGTQHTAVFNGDQCVDNAVVRYFVAGTPPPASYRCQS CEEEECCCCCEEEECCCHHHHHHHHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]