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The map label for this gene is yfcH [C]

Identifier: 41408055

GI number: 41408055

Start: 2161124

End: 2162047

Strand: Direct

Name: yfcH [C]

Synonym: MAP1957

Alternate gene names: 41408055

Gene position: 2161124-2162047 (Clockwise)

Preceding gene: 41408054

Following gene: 41408056

Centisome position: 44.75

GC content: 72.94

Gene sequence:

>924_bases
TTGGCTCGCGCTGGGCAAAAGGCCGTCATCGCCATTGCGGGTTCGTCCGGCCTGATCGGCTCGGCGCTGGCGGCGGCCCT
GCGCGCCGACGACCATCGGGTGCTGCGCATCGTGCGCCGGGCGCCGGCGAACGGCGACGAGCTGTCCTGGAATCCCGAGA
GCGGCGATCTGGATCCCGACGCGCTGCGCGGCGTCGACGCCGTCGTCAACCTGTGCGGGGTGAACATCGGCAAGCGGCGA
TGGTCGGGGGCCTTCAAGCAGAGCCTGCGCGACAGCCGCATCACCCCCACCGAGGTCCTCGCGCACGCCGTCGCCGACGC
CGGGGTGGCGACCCTGGTCAACGCCAGCGCGGTGGGCTTCTACGGCAACACCAAGGACCGCGTGGTCGACGAAAACGACC
GCGCCGGAACCGGTTTCCTGGCCCAGCTGTGCCAGGACTGGGAGGCGGCCACGCTGCCGGCGCAGTACGGCGGCGCCCGG
GTGGTGCTGGCCCGCACCGGGCTGGTGTTCTCCCCCGCCGGCGGCGCGCTGGGCCGGTTGCGGCCCCTGTTCCGGACCGG
CCTGGGCACCCGGCTGGGCAGTGGGCGGCAGTACATGTCGTGGATCACGCTGGAAGACGAGGTGCGGGCCCTGCTGTTCG
CGATCTTCGAGCCCGCGCTGTCCGGCCCGGTGAACATGACCGGGCCGGCCCCGGTCACCAACGCCGAATTCACCACCGCG
TTCGGGCGGGCGGTCAACCGCCCGACCCCGTTGATGCTGCCCGGTTTCGCCGTCCGCGCCGCGCTCGGGGAGTTCGCCGA
CGAGGGCCTGCTGACCGGGCAGCGCGCCATCCCCGCCGCGCTGGAGCGCACCGGATTCGTGTTCCACCACAACACCATTG
GCGAGGCGCTGGGCTATGCCACCGCCCGGCCCGCCCACGACTGA

Upstream 100 bases:

>100_bases
GACGGCGCCGACGCCGGCCGCTTCCTGACCACCATCAAGCACCGGCTCGAAGAGGGAGCATTCGAGGCCGACCTCGGGCT
GTGAGAAGGGCGGTCGAACG

Downstream 100 bases:

>100_bases
CCCCGCCCGGATTGGGCCCGACCGGGCCGGGCCGAGTACCGTCGCGAACGTGATCGATTCCATCCGGTCCAGCCGCGCCC
TGATCGATGTCCGCCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MARAGQKAVIAIAGSSGLIGSALAAALRADDHRVLRIVRRAPANGDELSWNPESGDLDPDALRGVDAVVNLCGVNIGKRR
WSGAFKQSLRDSRITPTEVLAHAVADAGVATLVNASAVGFYGNTKDRVVDENDRAGTGFLAQLCQDWEAATLPAQYGGAR
VVLARTGLVFSPAGGALGRLRPLFRTGLGTRLGSGRQYMSWITLEDEVRALLFAIFEPALSGPVNMTGPAPVTNAEFTTA
FGRAVNRPTPLMLPGFAVRAALGEFADEGLLTGQRAIPAALERTGFVFHHNTIGEALGYATARPAHD

Sequences:

>Translated_307_residues
MARAGQKAVIAIAGSSGLIGSALAAALRADDHRVLRIVRRAPANGDELSWNPESGDLDPDALRGVDAVVNLCGVNIGKRR
WSGAFKQSLRDSRITPTEVLAHAVADAGVATLVNASAVGFYGNTKDRVVDENDRAGTGFLAQLCQDWEAATLPAQYGGAR
VVLARTGLVFSPAGGALGRLRPLFRTGLGTRLGSGRQYMSWITLEDEVRALLFAIFEPALSGPVNMTGPAPVTNAEFTTA
FGRAVNRPTPLMLPGFAVRAALGEFADEGLLTGQRAIPAALERTGFVFHHNTIGEALGYATARPAHD
>Mature_306_residues
ARAGQKAVIAIAGSSGLIGSALAAALRADDHRVLRIVRRAPANGDELSWNPESGDLDPDALRGVDAVVNLCGVNIGKRRW
SGAFKQSLRDSRITPTEVLAHAVADAGVATLVNASAVGFYGNTKDRVVDENDRAGTGFLAQLCQDWEAATLPAQYGGARV
VLARTGLVFSPAGGALGRLRPLFRTGLGTRLGSGRQYMSWITLEDEVRALLFAIFEPALSGPVNMTGPAPVTNAEFTTAF
GRAVNRPTPLMLPGFAVRAALGEFADEGLLTGQRAIPAALERTGFVFHHNTIGEALGYATARPAHD

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=294, Percent_Identity=34.0136054421769, Blast_Score=132, Evalue=3e-31,
Organism=Escherichia coli, GI1788642, Length=296, Percent_Identity=38.8513513513513, Blast_Score=189, Evalue=3e-49,
Organism=Drosophila melanogaster, GI28573846, Length=297, Percent_Identity=31.3131313131313, Blast_Score=141, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32267; Mature: 32136

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAGQKAVIAIAGSSGLIGSALAAALRADDHRVLRIVRRAPANGDELSWNPESGDLDPD
CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
ALRGVDAVVNLCGVNIGKRRWSGAFKQSLRDSRITPTEVLAHAVADAGVATLVNASAVGF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCHHEEE
YGNTKDRVVDENDRAGTGFLAQLCQDWEAATLPAQYGGARVVLARTGLVFSPAGGALGRL
CCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCCHHHCCCEEEEEECCEEECCCCCHHHHH
RPLFRTGLGTRLGSGRQYMSWITLEDEVRALLFAIFEPALSGPVNMTGPAPVTNAEFTTA
HHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
FGRAVNRPTPLMLPGFAVRAALGEFADEGLLTGQRAIPAALERTGFVFHHNTIGEALGYA
HHHHHCCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCHHHHHHCCC
TARPAHD
CCCCCCC
>Mature Secondary Structure 
ARAGQKAVIAIAGSSGLIGSALAAALRADDHRVLRIVRRAPANGDELSWNPESGDLDPD
CCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
ALRGVDAVVNLCGVNIGKRRWSGAFKQSLRDSRITPTEVLAHAVADAGVATLVNASAVGF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCHHEEE
YGNTKDRVVDENDRAGTGFLAQLCQDWEAATLPAQYGGARVVLARTGLVFSPAGGALGRL
CCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCCHHHCCCEEEEEECCEEECCCCCHHHHH
RPLFRTGLGTRLGSGRQYMSWITLEDEVRALLFAIFEPALSGPVNMTGPAPVTNAEFTTA
HHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
FGRAVNRPTPLMLPGFAVRAALGEFADEGLLTGQRAIPAALERTGFVFHHNTIGEALGYA
HHHHHCCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCHHHHHHCCC
TARPAHD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]