| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is cbhK
Identifier: 41408040
GI number: 41408040
Start: 2144102
End: 2145076
Strand: Reverse
Name: cbhK
Synonym: MAP1942c
Alternate gene names: 41408040
Gene position: 2145076-2144102 (Counterclockwise)
Preceding gene: 41408042
Following gene: 41408038
Centisome position: 44.41
GC content: 69.95
Gene sequence:
>975_bases GTGACGATCGCGGTGACAGGGTCGATTGCAACCGACAATCTGATGCGCTTCCCCGGCCGGTTTTCCGAACACCTGCTGGC CGAGCACCTGCAGAAGGTGTCCCTCAGCTTCTTGGTCGACGACCTGGTGATTCACCGCGGCGGCGTGGCCGGCAACATCG CCTTCGCCATCGGGGTGCTGGGCGGCGACGTCGCGCTGGTCGGCGCGGCCGGCGACGACTTCGGCGAGTACCGCGACTGG CTGCAGCGCCACGGCGTCAACTGCGACCACGTGCTGATCTCGCAGACCGCGCACACCGCCCGGTTCGTGTGCACCACCGA CCAGGACATGGCCCAGATCGCCTCCTTCTATCCGGGCGCCATGTCGGAGGCCCGCAACATCAAGCTCGCCGACCTGGTGT CGTCGCTGGGCAAGCCGGAGCTGGTGATCATCGGCGCCAACGACCCGGAGGCGATGGTGGTGCACACCGAGGAGTGCCGC AAGCTGGGCCTGCCGTTCGCCGCCGACCCGTCCCAGCAGCTGCCCCGGCTGTCCGGCGAAGAGATCGACAAGCTGGTCGA CGGCGCCGCCTACCTGTTCACCAACGACTACGAGTGGGAGCTGCTGCTGTCCAAGACCGGCTGGTCGGAGGCGGACGTGC AGCAGAAGGTCGGGCTGCGGGTGACCACGCTGGGCGCCAAGGGCGTCGACATCGTCGAGCGCGACGGCACCACCACCCAC GTCGGCGTGGTGCCCGAGACCAGCCAAACCGACCCCACCGGCGTGGGCGACGCGTTCCGGGCCGGGTTCCTGACCGGGCG CAGCGCCGGGCTGAACCTGGAACGCTCCGCGCAGCTGGGCTCGCTGGTCGCCGTGCTGGTGCTGGAGTCCACCGGAACCC AGGAGTGGTCCTGGGACCACGAGGTCGCCAAGAGCCGGCTGGCCGGCGCGTACGGCGAGGACGCGGCCGCCGAGATCGCC GCGCTGCTGGCCTAG
Upstream 100 bases:
>100_bases TAAGGGAGGCTAGCGCAGACCCTGCACCGACCGTGCACGCAGCGACGGTCGAAACACCTGAGTAAGCTAGATAACCTTAC TAACGAAGGATGGAGATTTC
Downstream 100 bases:
>100_bases CTGTACTGACCAGCCCGCTCAGAGCTGCACCGGGTACACCGGCTCGCTGATCTGCGGCACCACGCTGTGCTCGACGAAGA TGGCGTGCCACAGCATGAAG
Product: CbhK
Products: NA
Alternate protein names: AK [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTIAVTGSIATDNLMRFPGRFSEHLLAEHLQKVSLSFLVDDLVIHRGGVAGNIAFAIGVLGGDVALVGAAGDDFGEYRDW LQRHGVNCDHVLISQTAHTARFVCTTDQDMAQIASFYPGAMSEARNIKLADLVSSLGKPELVIIGANDPEAMVVHTEECR KLGLPFAADPSQQLPRLSGEEIDKLVDGAAYLFTNDYEWELLLSKTGWSEADVQQKVGLRVTTLGAKGVDIVERDGTTTH VGVVPETSQTDPTGVGDAFRAGFLTGRSAGLNLERSAQLGSLVAVLVLESTGTQEWSWDHEVAKSRLAGAYGEDAAAEIA ALLA
Sequences:
>Translated_324_residues MTIAVTGSIATDNLMRFPGRFSEHLLAEHLQKVSLSFLVDDLVIHRGGVAGNIAFAIGVLGGDVALVGAAGDDFGEYRDW LQRHGVNCDHVLISQTAHTARFVCTTDQDMAQIASFYPGAMSEARNIKLADLVSSLGKPELVIIGANDPEAMVVHTEECR KLGLPFAADPSQQLPRLSGEEIDKLVDGAAYLFTNDYEWELLLSKTGWSEADVQQKVGLRVTTLGAKGVDIVERDGTTTH VGVVPETSQTDPTGVGDAFRAGFLTGRSAGLNLERSAQLGSLVAVLVLESTGTQEWSWDHEVAKSRLAGAYGEDAAAEIA ALLA >Mature_323_residues TIAVTGSIATDNLMRFPGRFSEHLLAEHLQKVSLSFLVDDLVIHRGGVAGNIAFAIGVLGGDVALVGAAGDDFGEYRDWL QRHGVNCDHVLISQTAHTARFVCTTDQDMAQIASFYPGAMSEARNIKLADLVSSLGKPELVIIGANDPEAMVVHTEECRK LGLPFAADPSQQLPRLSGEEIDKLVDGAAYLFTNDYEWELLLSKTGWSEADVQQKVGLRVTTLGAKGVDIVERDGTTTHV GVVPETSQTDPTGVGDAFRAGFLTGRSAGLNLERSAQLGSLVAVLVLESTGTQEWSWDHEVAKSRLAGAYGEDAAAEIAA LLA
Specific function: ATP dependent phosphorylation of adenosine to monophosphate derivatives [H]
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.20 [H]
Molecular weight: Translated: 34517; Mature: 34386
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAVTGSIATDNLMRFPGRFSEHLLAEHLQKVSLSFLVDDLVIHRGGVAGNIAFAIGVL CEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE GGDVALVGAAGDDFGEYRDWLQRHGVNCDHVLISQTAHTARFVCTTDQDMAQIASFYPGA CCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHCCCC MSEARNIKLADLVSSLGKPELVIIGANDPEAMVVHTEECRKLGLPFAADPSQQLPRLSGE HHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHCCCCCCCCCHHHCCCCCHH EIDKLVDGAAYLFTNDYEWELLLSKTGWSEADVQQKVGLRVTTLGAKGVDIVERDGTTTH HHHHHHCCEEEEEECCCEEEEEEECCCCCHHHHHHHCCEEEEEECCCCCEEEECCCCEEE VGVVPETSQTDPTGVGDAFRAGFLTGRSAGLNLERSAQLGSLVAVLVLESTGTQEWSWDH EEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCHH EVAKSRLAGAYGEDAAAEIAALLA HHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure TIAVTGSIATDNLMRFPGRFSEHLLAEHLQKVSLSFLVDDLVIHRGGVAGNIAFAIGVL EEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE GGDVALVGAAGDDFGEYRDWLQRHGVNCDHVLISQTAHTARFVCTTDQDMAQIASFYPGA CCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHCCCC MSEARNIKLADLVSSLGKPELVIIGANDPEAMVVHTEECRKLGLPFAADPSQQLPRLSGE HHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHCCCCCCCCCHHHCCCCCHH EIDKLVDGAAYLFTNDYEWELLLSKTGWSEADVQQKVGLRVTTLGAKGVDIVERDGTTTH HHHHHHCCEEEEEECCCEEEEEEECCCCCHHHHHHHCCEEEEEECCCCCEEEECCCCEEE VGVVPETSQTDPTGVGDAFRAGFLTGRSAGLNLERSAQLGSLVAVLVLESTGTQEWSWDH EEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCHH EVAKSRLAGAYGEDAAAEIAALLA HHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]