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The map label for this gene is ctaC

Identifier: 41408038

GI number: 41408038

Start: 2140948

End: 2142030

Strand: Reverse

Name: ctaC

Synonym: MAP1940c

Alternate gene names: 41408038

Gene position: 2142030-2140948 (Counterclockwise)

Preceding gene: 41408040

Following gene: 41408037

Centisome position: 44.35

GC content: 65.65

Gene sequence:

>1083_bases
GTGACCCCTCGCGAGCAGGACCGTTCGCAACCTTTGTCGCAGGGTAGGTTTCCGGGCCGCGTCGGGCGCAGGGTGCTGCG
GCCGTTGGCGCTGGCCGTGACGCTGGGTGTGCTGGCGATCGTGCTGAGCGGATGCAGCAGCTGGGCCGACGCGCTGGCGC
TGGGCTGGCCGAAGGGCATCACCCCGCAGGCCCACCTCAACCGGGAGCTGTGGATCGGCGCCGTGATCGCCTCGCTGGTG
GTCGGGGCCATCGTGTACGGGCTGATCTTCTGGGCGTCGGCGTTCCACCGCAAGAAGGCGACCGACACCGAGCTGCCCCG
CCAGTTCGGCTACAACATGCCGTTGGAGCTGGTGCTGACGGTGACGCCGTTCCTCATCATCTCGGTGCTGTTCTACTTCA
CCGTGGTGGTGCAGGAGAAGATGCTGCACATCGCCAAGGACCCCGAGGTGGTGGTCGACGTCACGGCCTTCCAGTGGAAC
TGGAAGTTCGGGTATCAGAAGGTCAACTTCAAAGACGGCACGCTGACCTACGACGGCGCCGACCCGGAGCGCAAGAAGGC
GATGGTGTCCAAGCCGGAAGGCAAGGACGCGCACGGCGAGGAGCGGGTCGGGGCCGTCCGCGGGCTGAACACCTCGGACC
GCACCTATCTGAACTTCGACAAGGTCGAGACGCTGGGCTCCAGCGACGAAATCCCGGTGCTGGTGCTGCCCACCGGCAAG
CGCATCGAATTCGACCTGGCGTCCGCGGACGTGGTGCACACCTTCTGGGTGCCCGAGTTCCTGTTCAAGCGCGACGTCAT
CCCCAACGCCGAGGCGAACAACTCGATCCACGTGTTCCAGGTCGAGGAGATCAACTCGCCCGGGGCGTTCGTGGGCCACT
GCGCCGAGTTCTGCGGCACCTATCACTCGATGATGAACTTCGAGGTCCGTGTGGTGTCGCCCAACGACTTCAAGGCCTAC
CTGCAGCAGCGGATGGACGGCAAGAGCAACGCCGAGGCGCTGCAGGCGATTGGTCAGTCCCCGGTGGCGGTGACCACGCA
CCCGTTCGACTCCAAGCGCGGTCAGTTGGCCGGAAGCCAGTAG

Upstream 100 bases:

>100_bases
TCCAACGCCGGGACCGACTGGCGGGCCGGGGTTTCGTCGCCCGGCTCAGACGCGTGGTCTACGCTGCGTAGTATTCGATA
TCCGAGCAGGAGGCGCCGAC

Downstream 100 bases:

>100_bases
GTTAGGACACCACATGCATATCGAAGCCAGGCTGTTCGAGTTCATCGCCGGGTTCTTCTTTCTGACCGCACTGCTCTACG
GCGTGCTGACCGCGCTGTTC

Product: CtaC

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MTPREQDRSQPLSQGRFPGRVGRRVLRPLALAVTLGVLAIVLSGCSSWADALALGWPKGITPQAHLNRELWIGAVIASLV
VGAIVYGLIFWASAFHRKKATDTELPRQFGYNMPLELVLTVTPFLIISVLFYFTVVVQEKMLHIAKDPEVVVDVTAFQWN
WKFGYQKVNFKDGTLTYDGADPERKKAMVSKPEGKDAHGEERVGAVRGLNTSDRTYLNFDKVETLGSSDEIPVLVLPTGK
RIEFDLASADVVHTFWVPEFLFKRDVIPNAEANNSIHVFQVEEINSPGAFVGHCAEFCGTYHSMMNFEVRVVSPNDFKAY
LQQRMDGKSNAEALQAIGQSPVAVTTHPFDSKRGQLAGSQ

Sequences:

>Translated_360_residues
MTPREQDRSQPLSQGRFPGRVGRRVLRPLALAVTLGVLAIVLSGCSSWADALALGWPKGITPQAHLNRELWIGAVIASLV
VGAIVYGLIFWASAFHRKKATDTELPRQFGYNMPLELVLTVTPFLIISVLFYFTVVVQEKMLHIAKDPEVVVDVTAFQWN
WKFGYQKVNFKDGTLTYDGADPERKKAMVSKPEGKDAHGEERVGAVRGLNTSDRTYLNFDKVETLGSSDEIPVLVLPTGK
RIEFDLASADVVHTFWVPEFLFKRDVIPNAEANNSIHVFQVEEINSPGAFVGHCAEFCGTYHSMMNFEVRVVSPNDFKAY
LQQRMDGKSNAEALQAIGQSPVAVTTHPFDSKRGQLAGSQ
>Mature_359_residues
TPREQDRSQPLSQGRFPGRVGRRVLRPLALAVTLGVLAIVLSGCSSWADALALGWPKGITPQAHLNRELWIGAVIASLVV
GAIVYGLIFWASAFHRKKATDTELPRQFGYNMPLELVLTVTPFLIISVLFYFTVVVQEKMLHIAKDPEVVVDVTAFQWNW
KFGYQKVNFKDGTLTYDGADPERKKAMVSKPEGKDAHGEERVGAVRGLNTSDRTYLNFDKVETLGSSDEIPVLVLPTGKR
IEFDLASADVVHTFWVPEFLFKRDVIPNAEANNSIHVFQVEEINSPGAFVGHCAEFCGTYHSMMNFEVRVVSPNDFKAYL
QQRMDGKSNAEALQAIGQSPVAVTTHPFDSKRGQLAGSQ

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COX2_MYCPA (Q73YL5)

Other databases:

- EMBL:   AE016958
- RefSeq:   NP_960874.1
- ProteinModelPortal:   Q73YL5
- EnsemblBacteria:   EBMYCT00000039076
- GeneID:   2720228
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP1940c
- NMPDR:   fig|262316.1.peg.1940
- GeneTree:   EBGT00050000016956
- HOGENOM:   HBG428789
- OMA:   YQWNWKF
- ProtClustDB:   CLSK791696
- BRENDA:   1.9.3.1
- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- Gene3D:   G3DSA:1.10.287.90
- Gene3D:   G3DSA:2.60.40.420
- PANTHER:   PTHR22888

Pfam domain/function: PF00116 COX2; SSF49503 Cupredoxin; SSF81464 Cyt_c_oxidase_II-like_TM

EC number: =1.9.3.1

Molecular weight: Translated: 39922; Mature: 39791

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS00078 COX2; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf503944)-; HASH(0xecd1d08)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPREQDRSQPLSQGRFPGRVGRRVLRPLALAVTLGVLAIVLSGCSSWADALALGWPKGI
CCCCCCHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPQAHLNRELWIGAVIASLVVGAIVYGLIFWASAFHRKKATDTELPRQFGYNMPLELVLT
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHH
VTPFLIISVLFYFTVVVQEKMLHIAKDPEVVVDVTAFQWNWKFGYQKVNFKDGTLTYDGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCEEEECCCCEEEECCC
DPERKKAMVSKPEGKDAHGEERVGAVRGLNTSDRTYLNFDKVETLGSSDEIPVLVLPTGK
CHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHCCCCCCCCEEEECCCC
RIEFDLASADVVHTFWVPEFLFKRDVIPNAEANNSIHVFQVEEINSPGAFVGHCAEFCGT
EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
YHSMMNFEVRVVSPNDFKAYLQQRMDGKSNAEALQAIGQSPVAVTTHPFDSKRGQLAGSQ
HHHHHCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCH
>Mature Secondary Structure 
TPREQDRSQPLSQGRFPGRVGRRVLRPLALAVTLGVLAIVLSGCSSWADALALGWPKGI
CCCCCHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPQAHLNRELWIGAVIASLVVGAIVYGLIFWASAFHRKKATDTELPRQFGYNMPLELVLT
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHH
VTPFLIISVLFYFTVVVQEKMLHIAKDPEVVVDVTAFQWNWKFGYQKVNFKDGTLTYDGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCEEEECCCCEEEECCC
DPERKKAMVSKPEGKDAHGEERVGAVRGLNTSDRTYLNFDKVETLGSSDEIPVLVLPTGK
CHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHCCCCCCCCEEEECCCC
RIEFDLASADVVHTFWVPEFLFKRDVIPNAEANNSIHVFQVEEINSPGAFVGHCAEFCGT
EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
YHSMMNFEVRVVSPNDFKAYLQQRMDGKSNAEALQAIGQSPVAVTTHPFDSKRGQLAGSQ
HHHHHCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA