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The map label for this gene is qcrB

Identifier: 41408033

GI number: 41408033

Start: 2136532

End: 2138232

Strand: Direct

Name: qcrB

Synonym: MAP1935

Alternate gene names: 41408033

Gene position: 2136532-2138232 (Clockwise)

Preceding gene: 41408032

Following gene: 41408039

Centisome position: 44.24

GC content: 66.02

Gene sequence:

>1701_bases
ATGAGTCCGAAATTGAGTCCCCCGAAGATCGGCGACGTCCTGGCCCGTCAAGGCGAGGACATCGACACGCGCTACCACCC
GTCGGCGGCCGTCCGCAGACAGCTCAACAAGGTCTTCCCCACCCACTGGTCGTTCCTGCTGGGCGAGATCGCGATGTACA
GCTTCATCGTGCTGCTGCTCACCGGGGTGTACCTGACGTTGTTCTTCGACCCGTCCATGGCCGAGGTCACCTACAACGGC
GTCTACCAACCGTTGCGCGGCGTGGAGATGTCGAAGGCCTTCGCGTCGGCCCTGGACATCTCCTTCGAGGTGCGCGGCGG
CCTGTTCGTGCGTCAGGTCCACCACTGGGCCGCGCTGATCTTCTCCGCCGCGATCATGGTGCACCTGGCCCGCATCTTCT
TCACCGGCGCCTTCCGGCGGCCGCGCGAGGCCAACTGGGTGATCGGCTCACTGTTGTTGATCCTGGCCATGTTCGAGGGT
TACTTCGGCTATTCGCTGCCCGACGACCTGTTGTCGGGCATCGGGTTGCGCGCCGCCCTGTCCTCGATCACGTTGGGTAT
GCCGGTGATCGGGACCTGGTTGCACTGGGCCCTGTTCGGAGGTGACTTCCCCTGCGGCGGTGTCGGAAGCGAGTGCGCCG
CAGCGGGTTACATCATCCCGCGGATGTACGCCCTGCACATCCTGCTGCTGCCCGGCATCATCCTGGCCCTGATCGGGCTG
CACCTGGCCATGGTGTGGTTCCAGAAGCACACCCAGTTCCCCGGCCCGGGTCGCACCGAGCACAACGTGGTCGGGGTGCG
GGTGATGCCGGTGTTCGCGGTCAAGTCCGGCGCGTTCTTCGCCGCCATCGTCGGCGTGCTGGGCCTGATGGGTGGTCTGC
TGCAGATCAACCCGATCTGGAACCTGGGCCCCTACAAGCCATCTCACGTCTCGGCCGGCTCGCAGCCGGACTTCTACATG
ATGTGGACCGAGGGCCTGGCGCGTATCTGGCCGCCGTGGGAGTTCTACTTCTGGCACCACACCATTCCGGCGGTGGTGTG
GGTGGCGCTGATCATGGGCGCGGTGTTCGTGCTGCTGATCATCTACCCGTTCCTGGAGAAGCGGTTCAGCGGTGACTACG
CGCACCACAACCTGCTGCAGCGGCCGCGCGACGTGCCGGTGCGCACGTCGATCGGCGCCATGGCGATCGCCTTCTACATG
GTGCTCACGCTGAGCGCGATGAACGACATCATCGCGCTGAAGTTCGACATCTCGCTGAACGCGACGACGTGGATCGGCCG
CATCGGCATGGTGATCGTTCCGCCGATCGTGTACTTCGTCACCTACCGGTGGTGCATCGGGCTGCAGCGCAGCGACCGCG
CGGTGCTCGAGCACGGCATCGAGACCGGCATCATCAAACGGTTGCCGCACGGCGCCTACATCGAGCTGCACCAGCCGCTG
GGCCCGGTCGACGAGCACGGTCACCCGCTGCCGCTGGAGTACCAGGGCGCACCGCTGCCCAAGAAGATGAACAAGCTGGG
CTCGGCCGGGTCGCCCGGCATCGGCAGCTTCCTGTACGCCGATCCGCCGTCCGAGGATGCGGCCCTGCGGGAGGCCGCGC
ACGCCTCCGAGCAGCGTGCCCTGACCGCCCTGCGCGAACATCAGGACAGCATCGTGGGCTCCACCAACGGCTCCACCAAC
GGCGAGGACGGCCAGCACTAG

Upstream 100 bases:

>100_bases
TGGCGCAACTGCCGATCACCATCGACACCAACGGGTATCTGGTCGCCAACGGTGACTTCGTCGAACCCGTCGGACCGGCA
TTCTGGGAGAGGACGACAAC

Downstream 100 bases:

>100_bases
CGACGCGGCAGCGCGCCCTGAGGCCCGGTGAGCCTCAGGGCGCGCTGTCGACGCGTTGTTGCTCGGCGGCCCGCAGGATC
GAGCCGGCCGTCAGGAACGC

Product: QcrB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MSPKLSPPKIGDVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLLTGVYLTLFFDPSMAEVTYNG
VYQPLRGVEMSKAFASALDISFEVRGGLFVRQVHHWAALIFSAAIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEG
YFGYSLPDDLLSGIGLRAALSSITLGMPVIGTWLHWALFGGDFPCGGVGSECAAAGYIIPRMYALHILLLPGIILALIGL
HLAMVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSHVSAGSQPDFYM
MWTEGLARIWPPWEFYFWHHTIPAVVWVALIMGAVFVLLIIYPFLEKRFSGDYAHHNLLQRPRDVPVRTSIGAMAIAFYM
VLTLSAMNDIIALKFDISLNATTWIGRIGMVIVPPIVYFVTYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPL
GPVDEHGHPLPLEYQGAPLPKKMNKLGSAGSPGIGSFLYADPPSEDAALREAAHASEQRALTALREHQDSIVGSTNGSTN
GEDGQH

Sequences:

>Translated_566_residues
MSPKLSPPKIGDVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLLTGVYLTLFFDPSMAEVTYNG
VYQPLRGVEMSKAFASALDISFEVRGGLFVRQVHHWAALIFSAAIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEG
YFGYSLPDDLLSGIGLRAALSSITLGMPVIGTWLHWALFGGDFPCGGVGSECAAAGYIIPRMYALHILLLPGIILALIGL
HLAMVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSHVSAGSQPDFYM
MWTEGLARIWPPWEFYFWHHTIPAVVWVALIMGAVFVLLIIYPFLEKRFSGDYAHHNLLQRPRDVPVRTSIGAMAIAFYM
VLTLSAMNDIIALKFDISLNATTWIGRIGMVIVPPIVYFVTYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPL
GPVDEHGHPLPLEYQGAPLPKKMNKLGSAGSPGIGSFLYADPPSEDAALREAAHASEQRALTALREHQDSIVGSTNGSTN
GEDGQH
>Mature_565_residues
SPKLSPPKIGDVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLLTGVYLTLFFDPSMAEVTYNGV
YQPLRGVEMSKAFASALDISFEVRGGLFVRQVHHWAALIFSAAIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGY
FGYSLPDDLLSGIGLRAALSSITLGMPVIGTWLHWALFGGDFPCGGVGSECAAAGYIIPRMYALHILLLPGIILALIGLH
LAMVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAIVGVLGLMGGLLQINPIWNLGPYKPSHVSAGSQPDFYMM
WTEGLARIWPPWEFYFWHHTIPAVVWVALIMGAVFVLLIIYPFLEKRFSGDYAHHNLLQRPRDVPVRTSIGAMAIAFYMV
LTLSAMNDIIALKFDISLNATTWIGRIGMVIVPPIVYFVTYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPLG
PVDEHGHPLPLEYQGAPLPKKMNKLGSAGSPGIGSFLYADPPSEDAALREAAHASEQRALTALREHQDSIVGSTNGSTNG
EDGQH

Specific function: Unknown

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62432; Mature: 62301

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKLSPPKIGDVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLL
CCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TGVYLTLFFDPSMAEVTYNGVYQPLRGVEMSKAFASALDISFEVRGGLFVRQVHHWAALI
HHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHH
FSAAIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGYFGYSLPDDLLSGIGLRAAL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHH
SSITLGMPVIGTWLHWALFGGDFPCGGVGSECAAAGYIIPRMYALHILLLPGIILALIGL
HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLAMVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAIVGVLGLMGGLLQINPIW
HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEECCCC
NLGPYKPSHVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAVVWVALIMGAVFVLLI
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
IYPFLEKRFSGDYAHHNLLQRPRDVPVRTSIGAMAIAFYMVLTLSAMNDIIALKFDISLN
HHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEC
ATTWIGRIGMVIVPPIVYFVTYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPL
CHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCEEEECCCC
GPVDEHGHPLPLEYQGAPLPKKMNKLGSAGSPGIGSFLYADPPSEDAALREAAHASEQRA
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH
LTALREHQDSIVGSTNGSTNGEDGQH
HHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPKLSPPKIGDVLARQGEDIDTRYHPSAAVRRQLNKVFPTHWSFLLGEIAMYSFIVLLL
CCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TGVYLTLFFDPSMAEVTYNGVYQPLRGVEMSKAFASALDISFEVRGGLFVRQVHHWAALI
HHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHH
FSAAIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGYFGYSLPDDLLSGIGLRAAL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHH
SSITLGMPVIGTWLHWALFGGDFPCGGVGSECAAAGYIIPRMYALHILLLPGIILALIGL
HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLAMVWFQKHTQFPGPGRTEHNVVGVRVMPVFAVKSGAFFAAIVGVLGLMGGLLQINPIW
HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEECCCC
NLGPYKPSHVSAGSQPDFYMMWTEGLARIWPPWEFYFWHHTIPAVVWVALIMGAVFVLLI
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
IYPFLEKRFSGDYAHHNLLQRPRDVPVRTSIGAMAIAFYMVLTLSAMNDIIALKFDISLN
HHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEC
ATTWIGRIGMVIVPPIVYFVTYRWCIGLQRSDRAVLEHGIETGIIKRLPHGAYIELHQPL
CHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCEEEECCCC
GPVDEHGHPLPLEYQGAPLPKKMNKLGSAGSPGIGSFLYADPPSEDAALREAAHASEQRA
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH
LTALREHQDSIVGSTNGSTNGEDGQH
HHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002; 2181404 [H]