| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408010
Identifier: 41408010
GI number: 41408010
Start: 2112317
End: 2113834
Strand: Direct
Name: 41408010
Synonym: MAP1912
Alternate gene names: NA
Gene position: 2112317-2113834 (Clockwise)
Preceding gene: 41408009
Following gene: 41408012
Centisome position: 43.74
GC content: 68.64
Gene sequence:
>1518_bases ATGGCCACCGGAACCGACACCCCGGCCGCCGACCCACCGGCGGCCAAACCCTCTCGCGGACAATGGTTTTCGCGGCTGAA GGCGTTCGCCGGTAGCGCCGACTCCGGCCCCGCGAAGCTGGGGATGTTGGGATCGGTGCTGATCACCCTGGGCGGGCTGG GAGCGGGCAGCACCCGTCAGCACGACCCGCTGCTCGAGTCGATTCACATGTCCTGGCTGCGTTTCGGCCACGGCCTGGTG CTGTCGTCGATCGTGCTGTGGACCGGCGTCGGCCTGATGCTGATCGCCTGGCTGAGCCTGGGCCGTCGCGTGTTGGCCGG CGAGGCAACCGAGTTCGTCATGAAGGCCACCACCGGCTTCTGGCTGGCGCCGCTGCTGGTGTCGGTGCCCGTGTTCAGCC GGGACACCTACTCGTACCTGGCGCAGGGCGCGCTGCTGCGCGACGGCCTGGATCCCTACGCGGTCGGTCCGGTCGCGAAC CCGAACAGCTTGCTGGACAACGTCAGTCCGATCTGGTCGATCACCACCGCACCCTATGGTCCGGTGTTCATCCTGGTGGC CAAGATCATCACCATCCTGGTCGGCAACAACGTGGTGGCGGGCACCGCGCTGCTGCGGCTGTGCATGCTGCCCGGCCTGG TGCTACTGATCTGGGCGACCCCCCGCCTGGCGCGCCACCTGGGCGCCGACGAGCCGACGGCGCTGTGGATTTGCGTGCTC AACCCGTTGGTGCTCATCCATCTGATGGGCGGGGTGCACAACGAGATGCTGATGGTCGGGTTGATGGCCGCCGGCATCGC GCTGACGTTCGGCGGCCGCCCCGTCGCCGGCGTCACGCTGATCACCGTCGCCATCGCGGTCAAGGCCACCGCCGGCATCG CACTGCCCTTCCTGGTGTGGGTGTGGGCGCGCCAACTGCGCGATCGGCGCGGATATCGGCCGGTGCCAGCATTTTTCGCG GCCACCGCGGCCTCGCTGCTGATCTTCGCGGTGGTGTTCGCCGCCCTGTCCGCGGTGGCCGGGGTGGGGCTGGGCTGGCT GACCGCGCTGGCCGGATCGGTGAAGATCATCAACTGGCTGACCGTGCCGACCGCGGCCGCCAACCTGATCCACGCGATCG GCAGCGGGTTCTTTCCGGTGAGTTTCTACCCGATATTGCGGGTCACCCGGCTGGTCGGCATCGCGATCATCGCGATCTCG CTGCCGCTGCTGTGGTGGCGGTTCCGCCGCGACGACCGCGACGCGCTCACCGGCATCGCGATCTCGATGCTGATCGTGGT GCTGTTCGTGCCCGCCGCGTTGCCGTGGTACTACTCGTGGCCGCTGGCGGTGCTGGCCCCGCTGGCGCAGTCCCGCCGCG CGGTGGCGATCATCGGCGGCCTGTCGACCTGGGTGATGGTGATCTTCAAACCCGATGGCTCCCACGGCATGTACTCGTGG CTGCACTTTTCGCTGGCCACCGCCGTCGCGCTGGTCGCCTGGTACAGCCTGTACCGGGTTCCGCAGCCGGCTCAGTAA
Upstream 100 bases:
>100_bases CGGGCCCTGGCCACCCTGGCGGCCGCACCCATCAACACCGCCGCCAAGGCGGGGTTGTCCGAATTGGCCAAGCTGGCCAC CAACCGGTCGGCCTGAACCG
Downstream 100 bases:
>100_bases GCCATCGCCTGGGCCCGGCGCACGACTTCGCGGGCCTGGTGCGCGTGCAGCGCATCGACGGGGCGGGCGTTGCTGATGGC GTCGCGGCTGCCGTCCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha(1-_6) Mannopyranosyltransferase; Mannosyltransferase MptA; Mannopyranosyltransferase; Alpha Mannopyranosyltransferase; Mannosyltransferase MptB; Carotene Biosynthesis Associated Membrane Protein; Abc Transporter Integral Membrane Protein; Integral-Membrane Protein; Transmembrane Protein; Acyltransferase
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MATGTDTPAADPPAAKPSRGQWFSRLKAFAGSADSGPAKLGMLGSVLITLGGLGAGSTRQHDPLLESIHMSWLRFGHGLV LSSIVLWTGVGLMLIAWLSLGRRVLAGEATEFVMKATTGFWLAPLLVSVPVFSRDTYSYLAQGALLRDGLDPYAVGPVAN PNSLLDNVSPIWSITTAPYGPVFILVAKIITILVGNNVVAGTALLRLCMLPGLVLLIWATPRLARHLGADEPTALWICVL NPLVLIHLMGGVHNEMLMVGLMAAGIALTFGGRPVAGVTLITVAIAVKATAGIALPFLVWVWARQLRDRRGYRPVPAFFA ATAASLLIFAVVFAALSAVAGVGLGWLTALAGSVKIINWLTVPTAAANLIHAIGSGFFPVSFYPILRVTRLVGIAIIAIS LPLLWWRFRRDDRDALTGIAISMLIVVLFVPAALPWYYSWPLAVLAPLAQSRRAVAIIGGLSTWVMVIFKPDGSHGMYSW LHFSLATAVALVAWYSLYRVPQPAQ
Sequences:
>Translated_505_residues MATGTDTPAADPPAAKPSRGQWFSRLKAFAGSADSGPAKLGMLGSVLITLGGLGAGSTRQHDPLLESIHMSWLRFGHGLV LSSIVLWTGVGLMLIAWLSLGRRVLAGEATEFVMKATTGFWLAPLLVSVPVFSRDTYSYLAQGALLRDGLDPYAVGPVAN PNSLLDNVSPIWSITTAPYGPVFILVAKIITILVGNNVVAGTALLRLCMLPGLVLLIWATPRLARHLGADEPTALWICVL NPLVLIHLMGGVHNEMLMVGLMAAGIALTFGGRPVAGVTLITVAIAVKATAGIALPFLVWVWARQLRDRRGYRPVPAFFA ATAASLLIFAVVFAALSAVAGVGLGWLTALAGSVKIINWLTVPTAAANLIHAIGSGFFPVSFYPILRVTRLVGIAIIAIS LPLLWWRFRRDDRDALTGIAISMLIVVLFVPAALPWYYSWPLAVLAPLAQSRRAVAIIGGLSTWVMVIFKPDGSHGMYSW LHFSLATAVALVAWYSLYRVPQPAQ >Mature_504_residues ATGTDTPAADPPAAKPSRGQWFSRLKAFAGSADSGPAKLGMLGSVLITLGGLGAGSTRQHDPLLESIHMSWLRFGHGLVL SSIVLWTGVGLMLIAWLSLGRRVLAGEATEFVMKATTGFWLAPLLVSVPVFSRDTYSYLAQGALLRDGLDPYAVGPVANP NSLLDNVSPIWSITTAPYGPVFILVAKIITILVGNNVVAGTALLRLCMLPGLVLLIWATPRLARHLGADEPTALWICVLN PLVLIHLMGGVHNEMLMVGLMAAGIALTFGGRPVAGVTLITVAIAVKATAGIALPFLVWVWARQLRDRRGYRPVPAFFAA TAASLLIFAVVFAALSAVAGVGLGWLTALAGSVKIINWLTVPTAAANLIHAIGSGFFPVSFYPILRVTRLVGIAIIAISL PLLWWRFRRDDRDALTGIAISMLIVVLFVPAALPWYYSWPLAVLAPLAQSRRAVAIIGGLSTWVMVIFKPDGSHGMYSWL HFSLATAVALVAWYSLYRVPQPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53839; Mature: 53707
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGTDTPAADPPAAKPSRGQWFSRLKAFAGSADSGPAKLGMLGSVLITLGGLGAGSTRQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC HDPLLESIHMSWLRFGHGLVLSSIVLWTGVGLMLIAWLSLGRRVLAGEATEFVMKATTGF CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHCHH WLAPLLVSVPVFSRDTYSYLAQGALLRDGLDPYAVGPVANPNSLLDNVSPIWSITTAPYG HHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCC PVFILVAKIITILVGNNVVAGTALLRLCMLPGLVLLIWATPRLARHLGADEPTALWICVL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEHHHHH NPLVLIHLMGGVHNEMLMVGLMAAGIALTFGGRPVAGVTLITVAIAVKATAGIALPFLVW HHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VWARQLRDRRGYRPVPAFFAATAASLLIFAVVFAALSAVAGVGLGWLTALAGSVKIINWL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TVPTAAANLIHAIGSGFFPVSFYPILRVTRLVGIAIIAISLPLLWWRFRRDDRDALTGIA ECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ISMLIVVLFVPAALPWYYSWPLAVLAPLAQSRRAVAIIGGLSTWVMVIFKPDGSHGMYSW HHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCHHHH LHFSLATAVALVAWYSLYRVPQPAQ HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ATGTDTPAADPPAAKPSRGQWFSRLKAFAGSADSGPAKLGMLGSVLITLGGLGAGSTRQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC HDPLLESIHMSWLRFGHGLVLSSIVLWTGVGLMLIAWLSLGRRVLAGEATEFVMKATTGF CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHCHH WLAPLLVSVPVFSRDTYSYLAQGALLRDGLDPYAVGPVANPNSLLDNVSPIWSITTAPYG HHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCC PVFILVAKIITILVGNNVVAGTALLRLCMLPGLVLLIWATPRLARHLGADEPTALWICVL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEHHHHH NPLVLIHLMGGVHNEMLMVGLMAAGIALTFGGRPVAGVTLITVAIAVKATAGIALPFLVW HHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VWARQLRDRRGYRPVPAFFAATAASLLIFAVVFAALSAVAGVGLGWLTALAGSVKIINWL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TVPTAAANLIHAIGSGFFPVSFYPILRVTRLVGIAIIAISLPLLWWRFRRDDRDALTGIA ECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ISMLIVVLFVPAALPWYYSWPLAVLAPLAQSRRAVAIIGGLSTWVMVIFKPDGSHGMYSW HHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCHHHH LHFSLATAVALVAWYSLYRVPQPAQ HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA