Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407955

Identifier: 41407955

GI number: 41407955

Start: 2036277

End: 2036960

Strand: Direct

Name: 41407955

Synonym: MAP1857

Alternate gene names: NA

Gene position: 2036277-2036960 (Clockwise)

Preceding gene: 41407954

Following gene: 41407956

Centisome position: 42.16

GC content: 65.35

Gene sequence:

>684_bases
ATGATCGTGATCGTGACCACCGAGAAGAACCCGAAGCCCGACACGGCCGCCGAGACCGAGCCGGCCGATGACGCGGGCGA
CGACGTCGAGAACGCGATCGCCGAGCAGGCCGGCGAGCAAACCGACGAGGCCGAAACCGACGAAGCCGAAGACGGGGGCG
AACTGCTCACCGGCAAGCGTCGCGGTCGCGAGCGCCGCAAGCGGCCCTGGCGGCGCTACCTGCGTCGCAGCGTGCTGCCG
TTGTTACTCGCTGCCTCCCTTGCCGTTTCGGGCTTCCTGGGCTGGCGGCAATGGCAGGAGCATCAGGTGAAGGCGGCCGG
TGAACAGGCCCAGCAGGCCGCCATCGCCTACGCGCAGGTGCTCACCAGCATCGATTCCAACAAGGTCGACGAGAACTTCA
AGCAGGTGCTCGACGGTGCGACCGGGGAGTTCAAGGACATGTACACCCAGTCCAGTGTCAAGCTCCGGCAATTGCTGATC
GACAACAAGGCCACCGCCCATGGCGTGGTGGTGGATTCGGCCATTCAGTCCGCCTCCACCGGCAAGGTCGTGGTGCTGCT
GTTCATCGACCAGACCGTCACCAACACCGCCGCGCCCGACCCGCGCATCGACCGCAGCCGGATCAAGATGACCATGGAAA
AGGTCGACGGTCGTTGGCGCGCAAGCAAAGTGCAGCTGCTGTGA

Upstream 100 bases:

>100_bases
CCCCGGGGCCGCTACACCATCCCCACCCCTTACGGCGGCCCGCAGCTGCCGATCGAACCGCCGCACTGAGCCGGAAACCA
GCCGAGCCGATCCCTAGGAG

Downstream 100 bases:

>100_bases
TCCCCCGGATCCTTGCGGCGCTGGTATTGCTCACGGCCGCAACCATTCCCGGCACCGGCAAGGCCCACGCGTCAGCACCG
TCGTTCTGCGGCGAGCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIVIVTTEKNPKPDTAAETEPADDAGDDVENAIAEQAGEQTDEAETDEAEDGGELLTGKRRGRERRKRPWRRYLRRSVLP
LLLAASLAVSGFLGWRQWQEHQVKAAGEQAQQAAIAYAQVLTSIDSNKVDENFKQVLDGATGEFKDMYTQSSVKLRQLLI
DNKATAHGVVVDSAIQSASTGKVVVLLFIDQTVTNTAAPDPRIDRSRIKMTMEKVDGRWRASKVQLL

Sequences:

>Translated_227_residues
MIVIVTTEKNPKPDTAAETEPADDAGDDVENAIAEQAGEQTDEAETDEAEDGGELLTGKRRGRERRKRPWRRYLRRSVLP
LLLAASLAVSGFLGWRQWQEHQVKAAGEQAQQAAIAYAQVLTSIDSNKVDENFKQVLDGATGEFKDMYTQSSVKLRQLLI
DNKATAHGVVVDSAIQSASTGKVVVLLFIDQTVTNTAAPDPRIDRSRIKMTMEKVDGRWRASKVQLL
>Mature_227_residues
MIVIVTTEKNPKPDTAAETEPADDAGDDVENAIAEQAGEQTDEAETDEAEDGGELLTGKRRGRERRKRPWRRYLRRSVLP
LLLAASLAVSGFLGWRQWQEHQVKAAGEQAQQAAIAYAQVLTSIDSNKVDENFKQVLDGATGEFKDMYTQSSVKLRQLLI
DNKATAHGVVVDSAIQSASTGKVVVLLFIDQTVTNTAAPDPRIDRSRIKMTMEKVDGRWRASKVQLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1362c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25075; Mature: 25075

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVIVTTEKNPKPDTAAETEPADDAGDDVENAIAEQAGEQTDEAETDEAEDGGELLTGKR
CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCHH
RGRERRKRPWRRYLRRSVLPLLLAASLAVSGFLGWRQWQEHQVKAAGEQAQQAAIAYAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTSIDSNKVDENFKQVLDGATGEFKDMYTQSSVKLRQLLIDNKATAHGVVVDSAIQSAST
HHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
GKVVVLLFIDQTVTNTAAPDPRIDRSRIKMTMEKVDGRWRASKVQLL
CCEEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIVIVTTEKNPKPDTAAETEPADDAGDDVENAIAEQAGEQTDEAETDEAEDGGELLTGKR
CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCHH
RGRERRKRPWRRYLRRSVLPLLLAASLAVSGFLGWRQWQEHQVKAAGEQAQQAAIAYAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTSIDSNKVDENFKQVLDGATGEFKDMYTQSSVKLRQLLIDNKATAHGVVVDSAIQSAST
HHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
GKVVVLLFIDQTVTNTAAPDPRIDRSRIKMTMEKVDGRWRASKVQLL
CCEEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]