Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407956

Identifier: 41407956

GI number: 41407956

Start: 2036957

End: 2037724

Strand: Direct

Name: 41407956

Synonym: MAP1858

Alternate gene names: NA

Gene position: 2036957-2037724 (Clockwise)

Preceding gene: 41407955

Following gene: 41407958

Centisome position: 42.17

GC content: 65.89

Gene sequence:

>768_bases
GTGATCCCCCGGATCCTTGCGGCGCTGGTATTGCTCACGGCCGCAACCATTCCCGGCACCGGCAAGGCCCACGCGTCAGC
ACCGTCGTTCTGCGGCGAGCTGGGCGGCGACTGGGACGGCCAGTACTGCCACACCTCGGTCACGTCGGAACGCAACGCCG
TCCGCGACATCAAGGTCGCCGTGCCCGACGACCTGGTCGACAACCCGACCACCGGACCGGTGATCCGCGACTACCTGCGC
ACGCTGGTCAACAACTGGCGAAATGCCAACTCCAGCATGGCCGCCGACAGTTACGGCGAGGAGAACTTCGAGGTGTTCCG
GCATGCCAGCCTGCTCAGCGCGGTGTTCCACGAGGCCTATCACGCCGACGGGCCCAAGCCCAACAACGCCTACCGGACCT
TCACCTTCGACATGGCAAGCGGCCGAAGGGTACAACTCGCGGACCTGACGACGTCAAACCCGCTGACCGCCATTCCCCCA
CTGGCGCAACCGTTTATCGAGACGGCACTCAACCAGGCACCGCCGCCGCACGACCCGGGCACCTACCCGTTCGTCGTCGA
CCGGTGGACGCCGGACAAGGTCTACTCCGGGGCGTACAAGGCCTGGGCTATCACCCCCGACGAGTTGATCCTGTACATGC
CGGACTATCCCGTCGGCCACGACGAACCGATCAACTTCGCCACCGGTCTGCCGCAGTGGTTCATGGACGGCGGCACCGTG
CAGGCGCATATCCCGTTGTCCGCCTTGGGTTCCGTGCTGCGCGTCTAG

Upstream 100 bases:

>100_bases
CCAACACCGCCGCGCCCGACCCGCGCATCGACCGCAGCCGGATCAAGATGACCATGGAAAAGGTCGACGGTCGTTGGCGC
GCAAGCAAAGTGCAGCTGCT

Downstream 100 bases:

>100_bases
CCGGCGGCGTACCGCTCAGTCCTCGGGGTTGTAGCCGAGGTTGGGGGCCAGCCAGCGCTCGGCCTCGGCCAGCGTCCAGC
CCTTGCGCTTCGCGTAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIPRILAALVLLTAATIPGTGKAHASAPSFCGELGGDWDGQYCHTSVTSERNAVRDIKVAVPDDLVDNPTTGPVIRDYLR
TLVNNWRNANSSMAADSYGEENFEVFRHASLLSAVFHEAYHADGPKPNNAYRTFTFDMASGRRVQLADLTTSNPLTAIPP
LAQPFIETALNQAPPPHDPGTYPFVVDRWTPDKVYSGAYKAWAITPDELILYMPDYPVGHDEPINFATGLPQWFMDGGTV
QAHIPLSALGSVLRV

Sequences:

>Translated_255_residues
MIPRILAALVLLTAATIPGTGKAHASAPSFCGELGGDWDGQYCHTSVTSERNAVRDIKVAVPDDLVDNPTTGPVIRDYLR
TLVNNWRNANSSMAADSYGEENFEVFRHASLLSAVFHEAYHADGPKPNNAYRTFTFDMASGRRVQLADLTTSNPLTAIPP
LAQPFIETALNQAPPPHDPGTYPFVVDRWTPDKVYSGAYKAWAITPDELILYMPDYPVGHDEPINFATGLPQWFMDGGTV
QAHIPLSALGSVLRV
>Mature_255_residues
MIPRILAALVLLTAATIPGTGKAHASAPSFCGELGGDWDGQYCHTSVTSERNAVRDIKVAVPDDLVDNPTTGPVIRDYLR
TLVNNWRNANSSMAADSYGEENFEVFRHASLLSAVFHEAYHADGPKPNNAYRTFTFDMASGRRVQLADLTTSNPLTAIPP
LAQPFIETALNQAPPPHDPGTYPFVVDRWTPDKVYSGAYKAWAITPDELILYMPDYPVGHDEPINFATGLPQWFMDGGTV
QAHIPLSALGSVLRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27806; Mature: 27806

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPRILAALVLLTAATIPGTGKAHASAPSFCGELGGDWDGQYCHTSVTSERNAVRDIKVA
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCHHCCHHHHHEEEEE
VPDDLVDNPTTGPVIRDYLRTLVNNWRNANSSMAADSYGEENFEVFRHASLLSAVFHEAY
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HADGPKPNNAYRTFTFDMASGRRVQLADLTTSNPLTAIPPLAQPFIETALNQAPPPHDPG
HCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
TYPFVVDRWTPDKVYSGAYKAWAITPDELILYMPDYPVGHDEPINFATGLPQWFMDGGTV
CCCEEEECCCCHHHHCCCCEEEEECHHHEEEECCCCCCCCCCCCCHHHCCHHHHHCCCEE
QAHIPLSALGSVLRV
EEECCHHHHHHHHCC
>Mature Secondary Structure
MIPRILAALVLLTAATIPGTGKAHASAPSFCGELGGDWDGQYCHTSVTSERNAVRDIKVA
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCHHCCHHHHHEEEEE
VPDDLVDNPTTGPVIRDYLRTLVNNWRNANSSMAADSYGEENFEVFRHASLLSAVFHEAY
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HADGPKPNNAYRTFTFDMASGRRVQLADLTTSNPLTAIPPLAQPFIETALNQAPPPHDPG
HCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
TYPFVVDRWTPDKVYSGAYKAWAITPDELILYMPDYPVGHDEPINFATGLPQWFMDGGTV
CCCEEEECCCCHHHHCCCCEEEEECHHHEEEECCCCCCCCCCCCCHHHCCHHHHHCCCEE
QAHIPLSALGSVLRV
EEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA