| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407757
Identifier: 41407757
GI number: 41407757
Start: 1812369
End: 1813148
Strand: Direct
Name: 41407757
Synonym: MAP1659
Alternate gene names: NA
Gene position: 1812369-1813148 (Clockwise)
Preceding gene: 41407756
Following gene: 41407758
Centisome position: 37.52
GC content: 74.23
Gene sequence:
>780_bases GTGGCGCCGTCGTTGCGCCCAGTACAAGCCCGGCCGGCGGCTACCGATCCCAACCACGTCCGGCACGCACTACCCTGCAC GGCAGGGGGCTGTCGAAAGGGTTCGCCGGTGAACGTGTCGCGAGTTGCCCTGGTCCCCATCGCCGTCCTGGCCTGGGCGC TGTTCCTGCCGGCGGGATCCGCGGCGGCCGATCCGCCACCCACCCAGGTGATCACCGTCGTGGCGGTCGGGCCGGACGGC CAAGCCATCAACGGCTATCGGGTGGCGGCCGGGCCCGACAGCGTCGGGCACGCATCCGAGTGTTCGCAACCGTCACCGTC GGCGGTCGACGACAACGTCTACTACTGTTCGCCGAGCGCCGCCGGCGCCGGCACCTGCTGGCCGTCCACGTCGGGATCCC TTCTGTGCGTGGACAATCCGTGGGACAGGCAGATGCACCGGGTGACGTTCGACGGGCAGCTGGCACCCGTGCGCGCGCCC GCCGACCCGGACCCGTTCGCGCTGACCCTCGACGACGGCACCCGCTGCCTGCTGCGCAACGGCGGCGCGTGGGGCGGGCG GGCCGACGGGTACGTCGGCGTCTACGGATGCGGCGGCGCCGGTTCGGATCTGGCCGTGCTGTGGCAGCCCAGCCAGGGCC GCGGCTCCTGCATCGACCGCTCGGCACCGGCGTGGACCGTCAAGGTCGGCCGGCTCGGGGCGCCGGACGCCGTGCTGCCG CCGCCGGCGACCCGCACGGTGACCGCCGCCTGGCTGGCCGGCGGCAGGGCCGGTCAGTAG
Upstream 100 bases:
>100_bases ATGTAGAGGCTGCGCTGCCGATCCACGCGGTTGATCTGTTCTTCGATGCTGGCGGGCACGATCTTCATTGCTGGCTTCCT TTCGGTGGGGCGGCGCCGGA
Downstream 100 bases:
>100_bases CGCCGCCGCCGTACTGCTATAACGCACGTATGTCAGGCCCAGGGCACACCATCACCCATGTTTCCGACACGGCGCGCTGG ACAGCATTGCACCGGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MAPSLRPVQARPAATDPNHVRHALPCTAGGCRKGSPVNVSRVALVPIAVLAWALFLPAGSAAADPPPTQVITVVAVGPDG QAINGYRVAAGPDSVGHASECSQPSPSAVDDNVYYCSPSAAGAGTCWPSTSGSLLCVDNPWDRQMHRVTFDGQLAPVRAP ADPDPFALTLDDGTRCLLRNGGAWGGRADGYVGVYGCGGAGSDLAVLWQPSQGRGSCIDRSAPAWTVKVGRLGAPDAVLP PPATRTVTAAWLAGGRAGQ
Sequences:
>Translated_259_residues MAPSLRPVQARPAATDPNHVRHALPCTAGGCRKGSPVNVSRVALVPIAVLAWALFLPAGSAAADPPPTQVITVVAVGPDG QAINGYRVAAGPDSVGHASECSQPSPSAVDDNVYYCSPSAAGAGTCWPSTSGSLLCVDNPWDRQMHRVTFDGQLAPVRAP ADPDPFALTLDDGTRCLLRNGGAWGGRADGYVGVYGCGGAGSDLAVLWQPSQGRGSCIDRSAPAWTVKVGRLGAPDAVLP PPATRTVTAAWLAGGRAGQ >Mature_258_residues APSLRPVQARPAATDPNHVRHALPCTAGGCRKGSPVNVSRVALVPIAVLAWALFLPAGSAAADPPPTQVITVVAVGPDGQ AINGYRVAAGPDSVGHASECSQPSPSAVDDNVYYCSPSAAGAGTCWPSTSGSLLCVDNPWDRQMHRVTFDGQLAPVRAPA DPDPFALTLDDGTRCLLRNGGAWGGRADGYVGVYGCGGAGSDLAVLWQPSQGRGSCIDRSAPAWTVKVGRLGAPDAVLPP PATRTVTAAWLAGGRAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26334; Mature: 26203
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSLRPVQARPAATDPNHVRHALPCTAGGCRKGSPVNVSRVALVPIAVLAWALFLPAGS CCCCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC AAADPPPTQVITVVAVGPDGQAINGYRVAAGPDSVGHASECSQPSPSAVDDNVYYCSPSA CCCCCCCCEEEEEEEECCCCCEECCEEEECCCCCCCCHHHCCCCCCCCCCCCEEEECCCC AGAGTCWPSTSGSLLCVDNPWDRQMHRVTFDGQLAPVRAPADPDPFALTLDDGTRCLLRN CCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCCCCEEEEECCCCEEEEEC GGAWGGRADGYVGVYGCGGAGSDLAVLWQPSQGRGSCIDRSAPAWTVKVGRLGAPDAVLP CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC PPATRTVTAAWLAGGRAGQ CCCCCEEEEEECCCCCCCC >Mature Secondary Structure APSLRPVQARPAATDPNHVRHALPCTAGGCRKGSPVNVSRVALVPIAVLAWALFLPAGS CCCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC AAADPPPTQVITVVAVGPDGQAINGYRVAAGPDSVGHASECSQPSPSAVDDNVYYCSPSA CCCCCCCCEEEEEEEECCCCCEECCEEEECCCCCCCCHHHCCCCCCCCCCCCEEEECCCC AGAGTCWPSTSGSLLCVDNPWDRQMHRVTFDGQLAPVRAPADPDPFALTLDDGTRCLLRN CCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCCCCEEEEECCCCEEEEEC GGAWGGRADGYVGVYGCGGAGSDLAVLWQPSQGRGSCIDRSAPAWTVKVGRLGAPDAVLP CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC PPATRTVTAAWLAGGRAGQ CCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA