| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407758
Identifier: 41407758
GI number: 41407758
Start: 1813178
End: 1814023
Strand: Direct
Name: 41407758
Synonym: MAP1660
Alternate gene names: NA
Gene position: 1813178-1814023 (Clockwise)
Preceding gene: 41407757
Following gene: 41407761
Centisome position: 37.54
GC content: 70.57
Gene sequence:
>846_bases ATGTCAGGCCCAGGGCACACCATCACCCATGTTTCCGACACGGCGCGCTGGACAGCATTGCACCGGGCCACCGAATCGGC GCGGCCCGACGCGGTTTTCCGTGACCCGCTGGCCGAACGTCTCGCCGGTGACCACGGCCGCGCGATCGTCGACCACGTGC CGCGCACGACGCGCAACGGGTGGTGGCTTGTCGCGCGGACCAAGATCATCGACGACGCCATCGCCGAGGCCATCGCCCAG GGCTGCGACCGGGTGCTGAACCTGGCCGCCGGGCTGGACACCCGGCCGTATCGGTTGAACCTGCCGCCCGACCTCGCCTG GGTGGAGGCGGACCTGCCGGCGTTGCTCGCCGAGAAGACGCAGGTCCTCGCCGACGAGGTGCCGCGCTGCCGGTTGACCC GAACCGCCGTTGACCTGGCCGACGCGGCGGCCCGGGACGCGTTTTTGAACGAGGCGCTGGACGGTGCGACCAAGGCGCTG GTGCTCACCGAGGGCCTGTTGATGTATCTGGACGACAGCGACGTGTCCGCGCTGTCGGCGGCGCTGCAGCGGCCCGAGGT CCGCTGGTGGATGCTCGACTTCGCCGGACCCGGCCTGAAGAAGATGATGAACAAGAAGATGGCGGGCATGCTGGCCAACG CGCCGTTCAAGTTCGCCCCGGACAACGGGTTGGCCTATTTCGAACGCCTGGGTTGGCGAACGGTCCAGGTGGAGGCGCTG TATTCGGCGGCCCGCCGGCTGCGGCGCTTGCCGCTGGTGATGCGCCCGCTCGGCTGGCTGCCGCAGCCGGATCCGCGCCG TCCGGGTCGCCGGGCGTGGAGCGCGGCCGCGCTGCTGACGCACTGA
Upstream 100 bases:
>100_bases CCGTGCTGCCGCCGCCGGCGACCCGCACGGTGACCGCCGCCTGGCTGGCCGGCGGCAGGGCCGGTCAGTAGCGCCGCCGC CGTACTGCTATAACGCACGT
Downstream 100 bases:
>100_bases CGGCGCCGGCGGGCGTTGCTACCAGACGCGGATCCAGTCGATGAGCATGTCCGCGGGATAGCTGCCCGGGCCGGGGTCGC CGCCGCCGGACCCGGCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSGPGHTITHVSDTARWTALHRATESARPDAVFRDPLAERLAGDHGRAIVDHVPRTTRNGWWLVARTKIIDDAIAEAIAQ GCDRVLNLAAGLDTRPYRLNLPPDLAWVEADLPALLAEKTQVLADEVPRCRLTRTAVDLADAAARDAFLNEALDGATKAL VLTEGLLMYLDDSDVSALSAALQRPEVRWWMLDFAGPGLKKMMNKKMAGMLANAPFKFAPDNGLAYFERLGWRTVQVEAL YSAARRLRRLPLVMRPLGWLPQPDPRRPGRRAWSAAALLTH
Sequences:
>Translated_281_residues MSGPGHTITHVSDTARWTALHRATESARPDAVFRDPLAERLAGDHGRAIVDHVPRTTRNGWWLVARTKIIDDAIAEAIAQ GCDRVLNLAAGLDTRPYRLNLPPDLAWVEADLPALLAEKTQVLADEVPRCRLTRTAVDLADAAARDAFLNEALDGATKAL VLTEGLLMYLDDSDVSALSAALQRPEVRWWMLDFAGPGLKKMMNKKMAGMLANAPFKFAPDNGLAYFERLGWRTVQVEAL YSAARRLRRLPLVMRPLGWLPQPDPRRPGRRAWSAAALLTH >Mature_280_residues SGPGHTITHVSDTARWTALHRATESARPDAVFRDPLAERLAGDHGRAIVDHVPRTTRNGWWLVARTKIIDDAIAEAIAQG CDRVLNLAAGLDTRPYRLNLPPDLAWVEADLPALLAEKTQVLADEVPRCRLTRTAVDLADAAARDAFLNEALDGATKALV LTEGLLMYLDDSDVSALSAALQRPEVRWWMLDFAGPGLKKMMNKKMAGMLANAPFKFAPDNGLAYFERLGWRTVQVEALY SAARRLRRLPLVMRPLGWLPQPDPRRPGRRAWSAAALLTH
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity [H]
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011610 - InterPro: IPR007213 [H]
Pfam domain/function: PF04072 LCM [H]
EC number: NA
Molecular weight: Translated: 31091; Mature: 30960
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPGHTITHVSDTARWTALHRATESARPDAVFRDPLAERLAGDHGRAIVDHVPRTTRNG CCCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCC WWLVARTKIIDDAIAEAIAQGCDRVLNLAAGLDTRPYRLNLPPDLAWVEADLPALLAEKT EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCHHHHHHHHH QVLADEVPRCRLTRTAVDLADAAARDAFLNEALDGATKALVLTEGLLMYLDDSDVSALSA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH ALQRPEVRWWMLDFAGPGLKKMMNKKMAGMLANAPFKFAPDNGLAYFERLGWRTVQVEAL HHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCEEEHHHHH YSAARRLRRLPLVMRPLGWLPQPDPRRPGRRAWSAAALLTH HHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SGPGHTITHVSDTARWTALHRATESARPDAVFRDPLAERLAGDHGRAIVDHVPRTTRNG CCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCC WWLVARTKIIDDAIAEAIAQGCDRVLNLAAGLDTRPYRLNLPPDLAWVEADLPALLAEKT EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCHHHHHHHHH QVLADEVPRCRLTRTAVDLADAAARDAFLNEALDGATKALVLTEGLLMYLDDSDVSALSA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH ALQRPEVRWWMLDFAGPGLKKMMNKKMAGMLANAPFKFAPDNGLAYFERLGWRTVQVEAL HHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCEEEHHHHH YSAARRLRRLPLVMRPLGWLPQPDPRRPGRRAWSAAALLTH HHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA