| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41407740
Identifier: 41407740
GI number: 41407740
Start: 1794852
End: 1795565
Strand: Direct
Name: 41407740
Synonym: MAP1642
Alternate gene names: NA
Gene position: 1794852-1795565 (Clockwise)
Preceding gene: 41407732
Following gene: 41407741
Centisome position: 37.16
GC content: 72.13
Gene sequence:
>714_bases GTGCATTTCGCGTGGGAGCGGCTGACCGGCAGTGTGCATCGCTGCCGGCTGCCGTTCTGCGACGTCACCGTCGGGCTGAT CTGCGGCCGCAGCGGAACCCTCCTCGTCGACACCGGAACCACGCTGACCGAAGCGGCCGCGATCGACGCCGACGTCCACC GGCTCGCCCGACGGCCGGTGAGCCATATTGCCTTGACGCACAAGCACTTCGACCACGTGCTGGGTTCGTCGTTGTTCACC GGCGCCGAGGTCTACTGCGCGCCGGAGGTGGTCGAGTATCTCGGGGCGGCGACGGATCAAATCCGCGACGACGCGCTGCG CCATGGCGCCGACGCCGCCGAGGTGGATGCCGCCATCGCGGCCCTGCGGCCCGTGCAGCACGGGATCCGCGACGCCCGGA TCGACCTGGGGGACCGCACGGTGACGATCACCCACCTGGGTGCCGGCCATACCGCGTCGGACCTGGTGGTGGTCGTGCCC GCGGCGCGCGACGGCGAACCCACGGTGGTGTTCACCGGTGATCTGGTCGAGGAATCCGCCGACCCCGCGATCGACGCCGA CTCAGATGTGACGGCCTGGCCGGCCACCCTGGACCGGCTGCTGGCGCTCGGCGGGCCCGGGGCCCGTTACGTGCCCGGGC ACGGCAGGGTCGTCGACGCCGCGTTCGTCCGTCGTCAGCGCGAGTGGTTGCGCGCCCGCGCGGCCACCCGGTGA
Upstream 100 bases:
>100_bases CATTTCCGACATGTCAACTTTTTCCGACACATCGCAGGGCGCATCGGCGGGCGGGGTGCGGACCCGGCGCGGGCGGCCCT GCTGCGGCTACCTTGCTGGT
Downstream 100 bases:
>100_bases ACGGCGCCCGCGTTCAATGCCGAAAGGCGTGGCGAAAAGTGTTGTGTCCCAAGGGTTGACGCCAACGACCGACCCGCCGC CGAACCCGACCGCGCCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Domain Protein; Beta-Lactamase; Beta-Lactamase-Like; Beta-Lactamase Class B; Zn-Dependent Hydrolase Including Glyoxylase
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MHFAWERLTGSVHRCRLPFCDVTVGLICGRSGTLLVDTGTTLTEAAAIDADVHRLARRPVSHIALTHKHFDHVLGSSLFT GAEVYCAPEVVEYLGAATDQIRDDALRHGADAAEVDAAIAALRPVQHGIRDARIDLGDRTVTITHLGAGHTASDLVVVVP AARDGEPTVVFTGDLVEESADPAIDADSDVTAWPATLDRLLALGGPGARYVPGHGRVVDAAFVRRQREWLRARAATR
Sequences:
>Translated_237_residues MHFAWERLTGSVHRCRLPFCDVTVGLICGRSGTLLVDTGTTLTEAAAIDADVHRLARRPVSHIALTHKHFDHVLGSSLFT GAEVYCAPEVVEYLGAATDQIRDDALRHGADAAEVDAAIAALRPVQHGIRDARIDLGDRTVTITHLGAGHTASDLVVVVP AARDGEPTVVFTGDLVEESADPAIDADSDVTAWPATLDRLLALGGPGARYVPGHGRVVDAAFVRRQREWLRARAATR >Mature_237_residues MHFAWERLTGSVHRCRLPFCDVTVGLICGRSGTLLVDTGTTLTEAAAIDADVHRLARRPVSHIALTHKHFDHVLGSSLFT GAEVYCAPEVVEYLGAATDQIRDDALRHGADAAEVDAAIAALRPVQHGIRDARIDLGDRTVTITHLGAGHTASDLVVVVP AARDGEPTVVFTGDLVEESADPAIDADSDVTAWPATLDRLLALGGPGARYVPGHGRVVDAAFVRRQREWLRARAATR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25342; Mature: 25342
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFAWERLTGSVHRCRLPFCDVTVGLICGRSGTLLVDTGTTLTEAAAIDADVHRLARRPV CCCCHHHHCCCHHHCCCCHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCH SHIALTHKHFDHVLGSSLFTGAEVYCAPEVVEYLGAATDQIRDDALRHGADAAEVDAAIA HHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH ALRPVQHGIRDARIDLGDRTVTITHLGAGHTASDLVVVVPAARDGEPTVVFTGDLVEESA HHHHHHHCHHHCEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECHHHHCCC DPAIDADSDVTAWPATLDRLLALGGPGARYVPGHGRVVDAAFVRRQREWLRARAATR CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHFAWERLTGSVHRCRLPFCDVTVGLICGRSGTLLVDTGTTLTEAAAIDADVHRLARRPV CCCCHHHHCCCHHHCCCCHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCH SHIALTHKHFDHVLGSSLFTGAEVYCAPEVVEYLGAATDQIRDDALRHGADAAEVDAAIA HHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH ALRPVQHGIRDARIDLGDRTVTITHLGAGHTASDLVVVVPAARDGEPTVVFTGDLVEESA HHHHHHHCHHHCEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECHHHHCCC DPAIDADSDVTAWPATLDRLLALGGPGARYVPGHGRVVDAAFVRRQREWLRARAATR CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA