Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407699

Identifier: 41407699

GI number: 41407699

Start: 1758347

End: 1759627

Strand: Direct

Name: 41407699

Synonym: MAP1601

Alternate gene names: NA

Gene position: 1758347-1759627 (Clockwise)

Preceding gene: 41407698

Following gene: 41407708

Centisome position: 36.41

GC content: 64.48

Gene sequence:

>1281_bases
ATGTTGGCGACCATACAAACGGCAGCGACCACGCAACCGGCGGCGGCCACGCAATCGGCTTTCGACGACCGCATCGAAGG
GCGCCTGGAAACCCTGCGCAAGGTGCTGACGAAGGATTCGGTCAAGAAGCTTCGGCTCGCGCCGATCAAATTCCTGTCCG
CGCTGGTTTCCGACGGGGACCTGCGTAACCTCAAGTTCGACCGGAACACCGACCCGACGGCCTCCGGCCCGCGCGAGCAG
TCGATGGAAATCGACACGTCGCTGCGGCAGCCGGTGTATCGCATCAGCCGGCGGACCCGGGAAGCCATGGCCCGGGTGCA
ATCGAATCTGGGGCTCGACAACCAGGACACCGATTGGATGATCGACAATTACTTCATCCACGAGCTGCTGCACAACTCCC
AGGGGATGTCCGGCGGCAACCACTCCGAGCTCAGCCGCCATGCCCCGCGGGTGCTGCTGGACGTGGACTACCAGGCCGAT
GCCCTGGCCGCGGTCACCGCGACCGCGCTCGCCTGGCTGGTGCCGCGCGAGTTCGGATTCCGGGCGAATCGGTGCGCCAA
CGAGAATCACTGGACGCTGTACGAGCGTGCGCTGAAAGCGATCCTGAGTCAGATGGAGATCTTCACGCTGCTCGGTTACT
GGAACACACCGCGAGCCCAGATCTCGCTGGTGGCCACCGGCCTGGAGCGGATTCTGCGAATTGCCACCTGGCACTACCAA
TTTCATCGGCTGAGGTCGCCGTTCAGGCCGAAGCGCCCGCTGGCCGACTTCCAAATCCTCGCCCAGCCGGTGCTGGACTT
CCGGAACCTGGCGTGGGCGGCGATTTTCGAACCCAGCACGCTGTGTAAGGATTGGCCGTCGAACGAACGCGCCAACGTGG
CGAAGTGGCTGAAACGAAAGCCGTTGCGGGGCCGCCTGTTTCCGTTGCACGGTCGCCCGCAGCTGGTCGTCACGGCCGCG
ACACCGCTGGGGACGACGCGGTTCATCCGGCACAACTCGACCGAAACCCATTACGAGGACGCCTTCGCGGGCTTCTTCGA
CAACGAACCCAGGCGCAGCAAGGAGTTCTTCACCACGTTGTTCATGCAACAGCAGTGGCTGCGGGGCGGGGCCGAAGCCG
GCGCATTCAACTACGCCTGGTTGAACCTGCGCAAGGACCGCCAGGTCGACCTGCTCAAGGTGACCCAGGGGCTGGCGCCC
GACCTCAAACCCGAGCAGCGGGGCCAGGTGCTCGACCAGCTGATGACGCCGTCGAGATCGCAGATCCTTTCGGCGCTCTG
A

Upstream 100 bases:

>100_bases
GCACACTCGTAATCGCTCAAAACCGGTCGCCGCTGGCCGCGCGCGCGTAACGTTCTACCGCACGGACGGCCCGTCCCACG
CCCGAGCTGGGGGTCAGACC

Downstream 100 bases:

>100_bases
CGCCGCGGTCAGACCAATGCTGAAGCGTCAAAGACCCAGCTAGTGTCCCCATTTGCCAAGCCCTCGAAGTGGTTCGGGGG
AGCGAAGGCCACCAGGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGDLRNLKFDRNTDPTASGPREQ
SMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWMIDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQAD
ALAAVTATALAWLVPREFGFRANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ
FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRKPLRGRLFPLHGRPQLVVTAA
TPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTLFMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAP
DLKPEQRGQVLDQLMTPSRSQILSAL

Sequences:

>Translated_426_residues
MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGDLRNLKFDRNTDPTASGPREQ
SMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWMIDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQAD
ALAAVTATALAWLVPREFGFRANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ
FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRKPLRGRLFPLHGRPQLVVTAA
TPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTLFMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAP
DLKPEQRGQVLDQLMTPSRSQILSAL
>Mature_426_residues
MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGDLRNLKFDRNTDPTASGPREQ
SMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWMIDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQAD
ALAAVTATALAWLVPREFGFRANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ
FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRKPLRGRLFPLHGRPQLVVTAA
TPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTLFMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAP
DLKPEQRGQVLDQLMTPSRSQILSAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48709; Mature: 48709

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGD
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LRNLKFDRNTDPTASGPREQSMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWM
CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
IDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQADALAAVTATALAWLVPREFGF
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
RANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRK
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCCCCHHHHHHHHHCC
PLRGRLFPLHGRPQLVVTAATPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTL
CCCCCEEEECCCCCEEEEECCCCCCHHHEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
FMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAPDLKPEQRGQVLDQLMTPSRS
HHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHH
QILSAL
HHHHCC
>Mature Secondary Structure
MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGD
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LRNLKFDRNTDPTASGPREQSMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWM
CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
IDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQADALAAVTATALAWLVPREFGF
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
RANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRK
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCCCCHHHHHHHHHCC
PLRGRLFPLHGRPQLVVTAATPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTL
CCCCCEEEECCCCCEEEEECCCCCCHHHEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
FMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAPDLKPEQRGQVLDQLMTPSRS
HHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHH
QILSAL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA