| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407699
Identifier: 41407699
GI number: 41407699
Start: 1758347
End: 1759627
Strand: Direct
Name: 41407699
Synonym: MAP1601
Alternate gene names: NA
Gene position: 1758347-1759627 (Clockwise)
Preceding gene: 41407698
Following gene: 41407708
Centisome position: 36.41
GC content: 64.48
Gene sequence:
>1281_bases ATGTTGGCGACCATACAAACGGCAGCGACCACGCAACCGGCGGCGGCCACGCAATCGGCTTTCGACGACCGCATCGAAGG GCGCCTGGAAACCCTGCGCAAGGTGCTGACGAAGGATTCGGTCAAGAAGCTTCGGCTCGCGCCGATCAAATTCCTGTCCG CGCTGGTTTCCGACGGGGACCTGCGTAACCTCAAGTTCGACCGGAACACCGACCCGACGGCCTCCGGCCCGCGCGAGCAG TCGATGGAAATCGACACGTCGCTGCGGCAGCCGGTGTATCGCATCAGCCGGCGGACCCGGGAAGCCATGGCCCGGGTGCA ATCGAATCTGGGGCTCGACAACCAGGACACCGATTGGATGATCGACAATTACTTCATCCACGAGCTGCTGCACAACTCCC AGGGGATGTCCGGCGGCAACCACTCCGAGCTCAGCCGCCATGCCCCGCGGGTGCTGCTGGACGTGGACTACCAGGCCGAT GCCCTGGCCGCGGTCACCGCGACCGCGCTCGCCTGGCTGGTGCCGCGCGAGTTCGGATTCCGGGCGAATCGGTGCGCCAA CGAGAATCACTGGACGCTGTACGAGCGTGCGCTGAAAGCGATCCTGAGTCAGATGGAGATCTTCACGCTGCTCGGTTACT GGAACACACCGCGAGCCCAGATCTCGCTGGTGGCCACCGGCCTGGAGCGGATTCTGCGAATTGCCACCTGGCACTACCAA TTTCATCGGCTGAGGTCGCCGTTCAGGCCGAAGCGCCCGCTGGCCGACTTCCAAATCCTCGCCCAGCCGGTGCTGGACTT CCGGAACCTGGCGTGGGCGGCGATTTTCGAACCCAGCACGCTGTGTAAGGATTGGCCGTCGAACGAACGCGCCAACGTGG CGAAGTGGCTGAAACGAAAGCCGTTGCGGGGCCGCCTGTTTCCGTTGCACGGTCGCCCGCAGCTGGTCGTCACGGCCGCG ACACCGCTGGGGACGACGCGGTTCATCCGGCACAACTCGACCGAAACCCATTACGAGGACGCCTTCGCGGGCTTCTTCGA CAACGAACCCAGGCGCAGCAAGGAGTTCTTCACCACGTTGTTCATGCAACAGCAGTGGCTGCGGGGCGGGGCCGAAGCCG GCGCATTCAACTACGCCTGGTTGAACCTGCGCAAGGACCGCCAGGTCGACCTGCTCAAGGTGACCCAGGGGCTGGCGCCC GACCTCAAACCCGAGCAGCGGGGCCAGGTGCTCGACCAGCTGATGACGCCGTCGAGATCGCAGATCCTTTCGGCGCTCTG A
Upstream 100 bases:
>100_bases GCACACTCGTAATCGCTCAAAACCGGTCGCCGCTGGCCGCGCGCGCGTAACGTTCTACCGCACGGACGGCCCGTCCCACG CCCGAGCTGGGGGTCAGACC
Downstream 100 bases:
>100_bases CGCCGCGGTCAGACCAATGCTGAAGCGTCAAAGACCCAGCTAGTGTCCCCATTTGCCAAGCCCTCGAAGTGGTTCGGGGG AGCGAAGGCCACCAGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGDLRNLKFDRNTDPTASGPREQ SMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWMIDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQAD ALAAVTATALAWLVPREFGFRANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRKPLRGRLFPLHGRPQLVVTAA TPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTLFMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAP DLKPEQRGQVLDQLMTPSRSQILSAL
Sequences:
>Translated_426_residues MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGDLRNLKFDRNTDPTASGPREQ SMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWMIDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQAD ALAAVTATALAWLVPREFGFRANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRKPLRGRLFPLHGRPQLVVTAA TPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTLFMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAP DLKPEQRGQVLDQLMTPSRSQILSAL >Mature_426_residues MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGDLRNLKFDRNTDPTASGPREQ SMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWMIDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQAD ALAAVTATALAWLVPREFGFRANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRKPLRGRLFPLHGRPQLVVTAA TPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTLFMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAP DLKPEQRGQVLDQLMTPSRSQILSAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48709; Mature: 48709
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGD CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LRNLKFDRNTDPTASGPREQSMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWM CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH IDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQADALAAVTATALAWLVPREFGF HHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC RANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCCCCHHHHHHHHHCC PLRGRLFPLHGRPQLVVTAATPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTL CCCCCEEEECCCCCEEEEECCCCCCHHHEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH FMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAPDLKPEQRGQVLDQLMTPSRS HHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHH QILSAL HHHHCC >Mature Secondary Structure MLATIQTAATTQPAAATQSAFDDRIEGRLETLRKVLTKDSVKKLRLAPIKFLSALVSDGD CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LRNLKFDRNTDPTASGPREQSMEIDTSLRQPVYRISRRTREAMARVQSNLGLDNQDTDWM CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH IDNYFIHELLHNSQGMSGGNHSELSRHAPRVLLDVDYQADALAAVTATALAWLVPREFGF HHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC RANRCANENHWTLYERALKAILSQMEIFTLLGYWNTPRAQISLVATGLERILRIATWHYQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FHRLRSPFRPKRPLADFQILAQPVLDFRNLAWAAIFEPSTLCKDWPSNERANVAKWLKRK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCCCCHHHHHHHHHCC PLRGRLFPLHGRPQLVVTAATPLGTTRFIRHNSTETHYEDAFAGFFDNEPRRSKEFFTTL CCCCCEEEECCCCCEEEEECCCCCCHHHEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH FMQQQWLRGGAEAGAFNYAWLNLRKDRQVDLLKVTQGLAPDLKPEQRGQVLDQLMTPSRS HHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHH QILSAL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA