Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41407698

Identifier: 41407698

GI number: 41407698

Start: 1756715

End: 1757833

Strand: Direct

Name: 41407698

Synonym: MAP1600

Alternate gene names: NA

Gene position: 1756715-1757833 (Clockwise)

Preceding gene: 41407697

Following gene: 41407699

Centisome position: 36.37

GC content: 70.06

Gene sequence:

>1119_bases
ATGGTCTCCGACACCGATGCCCTGGCCGAACACATCGGCGCCGTGTCGCTGATCGACCAGCACGTCCACGGCTGCTGGCT
GACGGCCGGCGGGCGGCGACGATTCGAGAACGCGCTGAACGAGGCCAACACCGAGCCGATCACCGGTTCGGGTTTCGACT
CGCAGCTCGGGTTCGCCGTGCGCGCCCACTGCGCTCCCATCCTGGGGCTGCCCAGACACGCCGACCCGCAGTCCTATTGG
GAGCGCCGTTGCCAACTCAGCGAACACGAACTGGCGCGGCTGTTCCTGCCGGCCGCCGGGGTCAGTAACTGGTTGGTGGA
CACCGGAATCGGGCACGGCGTGGTCGCCGGTGTCGCCGAGATGGCCGAGCTGGCGGCCGGCCCCGCGGCCGAGCTGGTGC
GTCTCGAGGAGGTCGCCGAGCAGGCGGCGCAAGCGCCGGGCGACTACGCGGCGGCCTTCGACGAGGTCCTGGCCGCGCGG
GCGGCCGGCGCGGTCGGCACCAAATCGATCCTGGCCTACCGGGGCGGGTTCGACGGAGACCTGAGCGAGCCGTCGGCGAC
CGAGGTCGCCCGGGCGGCGGCCCGGTGGCGCGAGCTCGGCGGCACCCGGTTGCGCGATCGGGTGCTGCTGCGGTTCGGGC
TGCACCGGGCGCTGCGGTTGGGCAAGCCGCTGCAATTGCACGTCGGGTTCGGCGATCGTGATTGCGATCTGCACAAGGCC
AATCCGCTGCTGCTGCTTGACTTCCTGCGCCACAGCGGAGATGCGCCGATCGTGTTGCTGCACTGCTATCCCTACGAGCG
GGAGGCCGGCTACCTGGCGCAGGCCTTCAACAACGTCTACGTCGACGGCGGGTTGAGCGTGAACCACTTGGGGGCGCGGT
CGCCGGCGTTCTTGGCGCGCCTGCTGGAGCTGGCGCCGTTTTCCAAGATCCTGTATTCCTCCGACGGATTCGGTCCCGCC
GAACTGCATTTTTTGGGAGCGGTGCTGTGGCGCAGGGGTATTCACCGCGTGCTGCGCGAGTTCGTCGAAGCCGGCGACTG
GGGCCGCGCCGACGCCATCCGGGTGGTCGATCTGATCGCCCGCGAGAACGCCGCGCGCCTCTACGGCCTGGCGCCGTAA

Upstream 100 bases:

>100_bases
GTGGCGGTGCGCCGCTTGGAGCAGGAACGCTACGGCGACCTGGACCCCGCGCAACTGGCGGACCGGTTCCGCATGGCCTG
GAGCCTGTGACGACGCCGCC

Downstream 100 bases:

>100_bases
CCGGCCGCCGGGCCCGATGGGCCGGGCCGCGCCGGTGCGACGCCGGGCGCGAATTTTCCCGATTCCGCCTGTTATTGACA
ACGCCGTCAGCTAGGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAVRAHCAPILGLPRHADPQSYW
ERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAEMAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAAR
AAGAVGTKSILAYRGGFDGDLSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA
NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLARLLELAPFSKILYSSDGFGPA
ELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIARENAARLYGLAP

Sequences:

>Translated_372_residues
MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAVRAHCAPILGLPRHADPQSYW
ERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAEMAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAAR
AAGAVGTKSILAYRGGFDGDLSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA
NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLARLLELAPFSKILYSSDGFGPA
ELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIARENAARLYGLAP
>Mature_372_residues
MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAVRAHCAPILGLPRHADPQSYW
ERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAEMAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAAR
AAGAVGTKSILAYRGGFDGDLSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA
NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLARLLELAPFSKILYSSDGFGPA
ELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIARENAARLYGLAP

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40238; Mature: 40238

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAV
CCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
RAHCAPILGLPRHADPQSYWERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAE
HHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH
MAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAARAAGAVGTKSILAYRGGFDGD
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
LSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLAR
CHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCEEECCCCEECCCCCCCHHHHHH
LLELAPFSKILYSSDGFGPAELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIA
HHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RENAARLYGLAP
HCCCHHHCCCCC
>Mature Secondary Structure
MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAV
CCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
RAHCAPILGLPRHADPQSYWERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAE
HHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH
MAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAARAAGAVGTKSILAYRGGFDGD
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
LSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLAR
CHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCEEECCCCEECCCCCCCHHHHHH
LLELAPFSKILYSSDGFGPAELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIA
HHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RENAARLYGLAP
HCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA