| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is glnA3
Identifier: 41407697
GI number: 41407697
Start: 1755352
End: 1756704
Strand: Direct
Name: glnA3
Synonym: MAP1599
Alternate gene names: 41407697
Gene position: 1755352-1756704 (Clockwise)
Preceding gene: 41407696
Following gene: 41407698
Centisome position: 36.34
GC content: 71.03
Gene sequence:
>1353_bases ATGACCGGCACACCGCTTGCCGCCGCGGCGATCGCCCAGCTGGAGGCCGAGGGCGTCGACACCGTGATCGGGACGGTCGT CAATCCCGCCGGGCTCACCCTGGCCAAGACGGTTCCGATCCGGCGGACGAACACCTTCGCCGATCCGGGTCTGGGCGCCA GCCCGTCCTGGCATGCCTTCGCCGTCGACCAAACCGGCATCGCGTTCACCGCCGAGGTGGGCGTGGTGGGGGACCAACGT CTTCGGATCGACCTGTCCGCGTTGCGCATCGTCGGCGACGGCCTGGCCTGGGCGCCGGCCGCGTTTTTCGCCCAGGACGG CACGCCCATACCCAGCTGCGCCCGCGGAACGCTGAAGCGGGTCGAGGCCGCGCTCGCCGACGCCGGCATCGACGCGGCCA TCGGGCATGAGGTCGAATTCGTTCTGGTCGCCCCGGACGGGCAGCGGTTGCCGTCGACGTTGTGGGCGCAGTACGGCCTT GCCGGGGTGCTGGAGCACGAGGCGTTCGTCCGCGATGTGATCGGTTCGGCGACCCGGGCCGGCATCGCGATCGAACAGCT GCACCCCGAGTACGGCGCCAACCAGTTCGAGCTCTCGCTGGCGCCGCAACCCCCGGTGGCCGCCGCCGACCAGCTGATCT TGATGCGGCTGATCATCGGCCGCGCGGCCCGCCGGCACGGGTTCCGCATCAGCCTGTCACCCGCACCGTTCGCCGGTGAT GTGGGATCCGGTGCTCACCAACACTTTTCGCTGTCCATGGCGGAAGGGCCGCTGTTCTCCGGCGGCGCCGGCACGGCGGG CATGACCCCGGCGGGGGAGAACGCGGTGGCGGGCGTGATCCGCGGGCTGCCCGAGGCGCAGGGTGTGCTGTGCGGGTCGA TCGTCTCCGGCCTGCGGATACGCCCGGGCAATTGGGCCGGCGCCTACGCCTGCTGGGGGACCGAGAACCGGGAAGCCGCA GTGCGATTCATCGTCGACGGCCCCGGCAGCCCGCGCGGCGGGAACGTCGAGGTGAAGATCGTCGATCCGTCGGCGAATCC CTACCTGGCGTCGGCGGCCATCCTCGGGCTCTCCCTGGACGGTATCAAGTCGCAGGCGGCGCTGCCTCCCGAGGTCACGG TCGACCCGGCGGCGCTGTCCGACGCCGACCGTGACCGCGACGGTGTGGTGCTGCTGACCGATTCGGCCGCAGAAGCGATT GCGGCCCTTGATGATTCGGAGCTGATGCGGCACATCCTGGGCGACCCGGTGGTCGACATGGTGGTGGCGGTGCGCCGCTT GGAGCAGGAACGCTACGGCGACCTGGACCCCGCGCAACTGGCGGACCGGTTCCGCATGGCCTGGAGCCTGTGA
Upstream 100 bases:
>100_bases CGCCGTTGGACGGCTTTCTCGATCGGTTCGTCACCGAGTTGGTCGGCCGCCAGAACTGAAATCGCGGGCGCCGGGCCCGC GACCCTGCACAATGACTGCC
Downstream 100 bases:
>100_bases CGACGCCGCCATGGTCTCCGACACCGATGCCCTGGCCGAACACATCGGCGCCGTGTCGCTGATCGACCAGCACGTCCACG GCTGCTGGCTGACGGCCGGC
Product: GlnA3
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MTGTPLAAAAIAQLEAEGVDTVIGTVVNPAGLTLAKTVPIRRTNTFADPGLGASPSWHAFAVDQTGIAFTAEVGVVGDQR LRIDLSALRIVGDGLAWAPAAFFAQDGTPIPSCARGTLKRVEAALADAGIDAAIGHEVEFVLVAPDGQRLPSTLWAQYGL AGVLEHEAFVRDVIGSATRAGIAIEQLHPEYGANQFELSLAPQPPVAAADQLILMRLIIGRAARRHGFRISLSPAPFAGD VGSGAHQHFSLSMAEGPLFSGGAGTAGMTPAGENAVAGVIRGLPEAQGVLCGSIVSGLRIRPGNWAGAYACWGTENREAA VRFIVDGPGSPRGGNVEVKIVDPSANPYLASAAILGLSLDGIKSQAALPPEVTVDPAALSDADRDRDGVVLLTDSAAEAI AALDDSELMRHILGDPVVDMVVAVRRLEQERYGDLDPAQLADRFRMAWSL
Sequences:
>Translated_450_residues MTGTPLAAAAIAQLEAEGVDTVIGTVVNPAGLTLAKTVPIRRTNTFADPGLGASPSWHAFAVDQTGIAFTAEVGVVGDQR LRIDLSALRIVGDGLAWAPAAFFAQDGTPIPSCARGTLKRVEAALADAGIDAAIGHEVEFVLVAPDGQRLPSTLWAQYGL AGVLEHEAFVRDVIGSATRAGIAIEQLHPEYGANQFELSLAPQPPVAAADQLILMRLIIGRAARRHGFRISLSPAPFAGD VGSGAHQHFSLSMAEGPLFSGGAGTAGMTPAGENAVAGVIRGLPEAQGVLCGSIVSGLRIRPGNWAGAYACWGTENREAA VRFIVDGPGSPRGGNVEVKIVDPSANPYLASAAILGLSLDGIKSQAALPPEVTVDPAALSDADRDRDGVVLLTDSAAEAI AALDDSELMRHILGDPVVDMVVAVRRLEQERYGDLDPAQLADRFRMAWSL >Mature_449_residues TGTPLAAAAIAQLEAEGVDTVIGTVVNPAGLTLAKTVPIRRTNTFADPGLGASPSWHAFAVDQTGIAFTAEVGVVGDQRL RIDLSALRIVGDGLAWAPAAFFAQDGTPIPSCARGTLKRVEAALADAGIDAAIGHEVEFVLVAPDGQRLPSTLWAQYGLA GVLEHEAFVRDVIGSATRAGIAIEQLHPEYGANQFELSLAPQPPVAAADQLILMRLIIGRAARRHGFRISLSPAPFAGDV GSGAHQHFSLSMAEGPLFSGGAGTAGMTPAGENAVAGVIRGLPEAQGVLCGSIVSGLRIRPGNWAGAYACWGTENREAAV RFIVDGPGSPRGGNVEVKIVDPSANPYLASAAILGLSLDGIKSQAALPPEVTVDPAALSDADRDRDGVVLLTDSAAEAIA ALDDSELMRHILGDPVVDMVVAVRRLEQERYGDLDPAQLADRFRMAWSL
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=354, Percent_Identity=21.7514124293785, Blast_Score=73, Evalue=7e-13, Organism=Escherichia coli, GI1790301, Length=257, Percent_Identity=29.9610894941634, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI87081870, Length=290, Percent_Identity=27.9310344827586, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 46637; Mature: 46506
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTPLAAAAIAQLEAEGVDTVIGTVVNPAGLTLAKTVPIRRTNTFADPGLGASPSWHAF CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE AVDQTGIAFTAEVGVVGDQRLRIDLSALRIVGDGLAWAPAAFFAQDGTPIPSCARGTLKR EECCCCEEEEEEECCCCCCEEEEEHHHHHEECCCCHHCCHHHHCCCCCCCCHHHHHHHHH VEAALADAGIDAAIGHEVEFVLVAPDGQRLPSTLWAQYGLAGVLEHEAFVRDVIGSATRA HHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCHHHC GIAIEQLHPEYGANQFELSLAPQPPVAAADQLILMRLIIGRAARRHGFRISLSPAPFAGD CEEHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC VGSGAHQHFSLSMAEGPLFSGGAGTAGMTPAGENAVAGVIRGLPEAQGVLCGSIVSGLRI CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEE RPGNWAGAYACWGTENREAAVRFIVDGPGSPRGGNVEVKIVDPSANPYLASAAILGLSLD CCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHEEEEECC GIKSQAALPPEVTVDPAALSDADRDRDGVVLLTDSAAEAIAALDDSELMRHILGDPVVDM CCCCCCCCCCCCEECCHHCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHCCHHHHH VVAVRRLEQERYGDLDPAQLADRFRMAWSL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TGTPLAAAAIAQLEAEGVDTVIGTVVNPAGLTLAKTVPIRRTNTFADPGLGASPSWHAF CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE AVDQTGIAFTAEVGVVGDQRLRIDLSALRIVGDGLAWAPAAFFAQDGTPIPSCARGTLKR EECCCCEEEEEEECCCCCCEEEEEHHHHHEECCCCHHCCHHHHCCCCCCCCHHHHHHHHH VEAALADAGIDAAIGHEVEFVLVAPDGQRLPSTLWAQYGLAGVLEHEAFVRDVIGSATRA HHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCHHHC GIAIEQLHPEYGANQFELSLAPQPPVAAADQLILMRLIIGRAARRHGFRISLSPAPFAGD CEEHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC VGSGAHQHFSLSMAEGPLFSGGAGTAGMTPAGENAVAGVIRGLPEAQGVLCGSIVSGLRI CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEE RPGNWAGAYACWGTENREAAVRFIVDGPGSPRGGNVEVKIVDPSANPYLASAAILGLSLD CCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHEEEEECC GIKSQAALPPEVTVDPAALSDADRDRDGVVLLTDSAAEAIAALDDSELMRHILGDPVVDM CCCCCCCCCCCCEECCHHCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHCCHHHHH VVAVRRLEQERYGDLDPAQLADRFRMAWSL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2572584 [H]