Click here to switch to the map view.

The map label for this gene is p49 [H]

Identifier: 41407261

GI number: 41407261

Start: 1220352

End: 1221776

Strand: Direct

Name: p49 [H]

Synonym: MAP1163

Alternate gene names: 41407261

Gene position: 1220352-1221776 (Clockwise)

Preceding gene: 41407260

Following gene: 41407262

Centisome position: 25.27

GC content: 73.89

Gene sequence:

>1425_bases
ATGGCTAGGGCGGTGGTGGTCGGGGCCGGGCCCAACGGGCTGGCCGCGGCGATCCAGCTGGCCCGCCGCGGCGTCGAGGT
GCAGGTGCTCGAGGCCGGCGAGACGCCCGGCGGGGGAGCGCGGTCGGGTGAGCTGACGCTGCCCGGGGTCATCCACGACC
TGTGCTCGGCCACCCACCCGTTCGGCGTCGGCTCGCCGTTCTGGAAGGAGATCGACCTGCCGAGCTACGGGCTGGTGTGG
AAGTGGCCGCAGATCGACTGCGCCCATCCGCTCGACGACGGCAGCGCCGGTGTGCTGTACCGGTCGATCGAGCAGACGAC
AGCCGGCATGGGGCCCGACGCCACCCGGTGGCGGCGCGCCCTCGGGGACCTGGCGGCCGGATTCGACCAGCTGGCAAGCG
ATTTGATGCGCCCGGTGCTGCGCGTCCCGCACCATCCGGTGCGCCTCGCCCGATTCGGGCCCCGCGCGCTGCTGCCGGCC
ACCGTGCTGGCCCGCTGGTTTCGCACCGAGCAGGCCCGGGCGCTGTTCGGCGGCGCCGCCGCCCACATCTACACCCGGCT
GGACCGTCCGCTGACCGCCTCGCTGGGCCTGCTGTTTTTGGCCAGCGGGCACCGGTACGGCTGGCCGGTCGCCGAAGGGG
GATCGGGCTCGATCATCCATGCCCTGGTCGCCGCCCTGCGCGCGCACGGCGGCGACGTCGCCACCGGCGTCACGGTCAGC
GACCGGCGCGACATCCCGGACGCCGACATCGTCATGCTCGACCTGACCCCCGCCGCGGCGCTGCGGCTCTACGGCGAGCT
GATGCCGGGGCGCATCGCGCGGTCCTACCGCCGCTACCGGCAGGGCTCCTCGGCGTTCAAGGTCGACTTCGCCGTCGAGG
GCGACATCCCGTGGACCAACCCGCACTGCGCCCGGGCCGGCAGCGTGCACCTGGGCGGGAGCTTCGCCGAGATCGCCGAC
ACCGAACGCCAACGCGCGCAGGGCAAGCTGGCGCCGCGCCCGTTCGTCCTGGTGGGACAGCAATACCTGGCCGACCCGTC
CCGCTCGGCCGGCGGCATCAACCCGATCTGGGCCTACGCGCACGTGCCGTTCGGCTACACCGGCGACGCCACCGCCCTCG
TCGTCGACCAGATCGAGCGGTTCGCGCCCGGATTCCGCGACCGCGTCGTCGCCACCGTCAGGAGGGGCACCGCCGACCTG
GCCGCCTACAACGCCAACTACATCGGCGGCGATATCCTCGGCGGCGCCAACGACGGGCTGCAGGTCATCCTGCGGCCGCG
CGTCTCGGTCAGCCCGTACGCCACCGGCGTGCCCGGTGTCTATCTGTGTTCGCAGTCCACGCCGCCGGGACCGGGCATCC
ACGGGCTGTGTGGCTATCACGCCGCCGAGGCCGCGCTGGGCTGGCTGCGCCGCCGCGGCGGCTAG

Upstream 100 bases:

>100_bases
GCCAGGACCGGGCTGATCGAAGCGGGCCACGTCGACGTCGCGAGCATGCTGAGCCGGCAGCCCTGGCCCGAGCCCGGCGA
CGAATACCCCGTCCACGTCC

Downstream 100 bases:

>100_bases
CTTGCGCAGGCTGTGGCCGAGGTCACCGGGGCGATACCGGAGCGGCAACCGGCCGCGGCACTGATCTAGGCTGGCGACGA
GCGCAAATCAGCCGACACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MARAVVVGAGPNGLAAAIQLARRGVEVQVLEAGETPGGGARSGELTLPGVIHDLCSATHPFGVGSPFWKEIDLPSYGLVW
KWPQIDCAHPLDDGSAGVLYRSIEQTTAGMGPDATRWRRALGDLAAGFDQLASDLMRPVLRVPHHPVRLARFGPRALLPA
TVLARWFRTEQARALFGGAAAHIYTRLDRPLTASLGLLFLASGHRYGWPVAEGGSGSIIHALVAALRAHGGDVATGVTVS
DRRDIPDADIVMLDLTPAAALRLYGELMPGRIARSYRRYRQGSSAFKVDFAVEGDIPWTNPHCARAGSVHLGGSFAEIAD
TERQRAQGKLAPRPFVLVGQQYLADPSRSAGGINPIWAYAHVPFGYTGDATALVVDQIERFAPGFRDRVVATVRRGTADL
AAYNANYIGGDILGGANDGLQVILRPRVSVSPYATGVPGVYLCSQSTPPGPGIHGLCGYHAAEAALGWLRRRGG

Sequences:

>Translated_474_residues
MARAVVVGAGPNGLAAAIQLARRGVEVQVLEAGETPGGGARSGELTLPGVIHDLCSATHPFGVGSPFWKEIDLPSYGLVW
KWPQIDCAHPLDDGSAGVLYRSIEQTTAGMGPDATRWRRALGDLAAGFDQLASDLMRPVLRVPHHPVRLARFGPRALLPA
TVLARWFRTEQARALFGGAAAHIYTRLDRPLTASLGLLFLASGHRYGWPVAEGGSGSIIHALVAALRAHGGDVATGVTVS
DRRDIPDADIVMLDLTPAAALRLYGELMPGRIARSYRRYRQGSSAFKVDFAVEGDIPWTNPHCARAGSVHLGGSFAEIAD
TERQRAQGKLAPRPFVLVGQQYLADPSRSAGGINPIWAYAHVPFGYTGDATALVVDQIERFAPGFRDRVVATVRRGTADL
AAYNANYIGGDILGGANDGLQVILRPRVSVSPYATGVPGVYLCSQSTPPGPGIHGLCGYHAAEAALGWLRRRGG
>Mature_473_residues
ARAVVVGAGPNGLAAAIQLARRGVEVQVLEAGETPGGGARSGELTLPGVIHDLCSATHPFGVGSPFWKEIDLPSYGLVWK
WPQIDCAHPLDDGSAGVLYRSIEQTTAGMGPDATRWRRALGDLAAGFDQLASDLMRPVLRVPHHPVRLARFGPRALLPAT
VLARWFRTEQARALFGGAAAHIYTRLDRPLTASLGLLFLASGHRYGWPVAEGGSGSIIHALVAALRAHGGDVATGVTVSD
RRDIPDADIVMLDLTPAAALRLYGELMPGRIARSYRRYRQGSSAFKVDFAVEGDIPWTNPHCARAGSVHLGGSFAEIADT
ERQRAQGKLAPRPFVLVGQQYLADPSRSAGGINPIWAYAHVPFGYTGDATALVVDQIERFAPGFRDRVVATVRRGTADLA
AYNANYIGGDILGGANDGLQVILRPRVSVSPYATGVPGVYLCSQSTPPGPGIHGLCGYHAAEAALGWLRRRGG

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50284; Mature: 50153

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAVVVGAGPNGLAAAIQLARRGVEVQVLEAGETPGGGARSGELTLPGVIHDLCSATHP
CCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHHHCCCC
FGVGSPFWKEIDLPSYGLVWKWPQIDCAHPLDDGSAGVLYRSIEQTTAGMGPDATRWRRA
CCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
LGDLAAGFDQLASDLMRPVLRVPHHPVRLARFGPRALLPATVLARWFRTEQARALFGGAA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AHIYTRLDRPLTASLGLLFLASGHRYGWPVAEGGSGSIIHALVAALRAHGGDVATGVTVS
HHHHHHCCCCHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCEEC
DRRDIPDADIVMLDLTPAAALRLYGELMPGRIARSYRRYRQGSSAFKVDFAVEGDIPWTN
CCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
PHCARAGSVHLGGSFAEIADTERQRAQGKLAPRPFVLVGQQYLADPSRSAGGINPIWAYA
CCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHCCCCCCCCCCCCEEEEE
HVPFGYTGDATALVVDQIERFAPGFRDRVVATVRRGTADLAAYNANYIGGDILGGANDGL
ECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCC
QVILRPRVSVSPYATGVPGVYLCSQSTPPGPGIHGLCGYHAAEAALGWLRRRGG
EEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARAVVVGAGPNGLAAAIQLARRGVEVQVLEAGETPGGGARSGELTLPGVIHDLCSATHP
CCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHHHCCCC
FGVGSPFWKEIDLPSYGLVWKWPQIDCAHPLDDGSAGVLYRSIEQTTAGMGPDATRWRRA
CCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
LGDLAAGFDQLASDLMRPVLRVPHHPVRLARFGPRALLPATVLARWFRTEQARALFGGAA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AHIYTRLDRPLTASLGLLFLASGHRYGWPVAEGGSGSIIHALVAALRAHGGDVATGVTVS
HHHHHHCCCCHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCEEC
DRRDIPDADIVMLDLTPAAALRLYGELMPGRIARSYRRYRQGSSAFKVDFAVEGDIPWTN
CCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
PHCARAGSVHLGGSFAEIADTERQRAQGKLAPRPFVLVGQQYLADPSRSAGGINPIWAYA
CCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHCCCCCCCCCCCCEEEEE
HVPFGYTGDATALVVDQIERFAPGFRDRVVATVRRGTADLAAYNANYIGGDILGGANDGL
ECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCC
QVILRPRVSVSPYATGVPGVYLCSQSTPPGPGIHGLCGYHAAEAALGWLRRRGG
EEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]