| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is pyrR
Identifier: 41407212
GI number: 41407212
Start: 1166621
End: 1167193
Strand: Direct
Name: pyrR
Synonym: MAP1114
Alternate gene names: 41407212
Gene position: 1166621-1167193 (Clockwise)
Preceding gene: 41407209
Following gene: 41407213
Centisome position: 24.15
GC content: 71.2
Gene sequence:
>573_bases ATGGGTGCTGCGGGCAACACCGGCTCGTCCGGTGATTCCCGGGAGTTGATGTCGGCGGCCGACGTCGGCCGCACCATTTC CCGCATCGCGCATCAGATCATCGAAAAGACCGCGCTGGACGGTCCGGACGGGCCGCGGGTGGTGCTGCTGGGCATCCCGA CCCGCGGCGTCACCCTGGCCGACCGGCTGGCCCGCAACATCGGCGAGTACAGCGGGGTCGAGGTCGGCCACGGCGCCCTG GACATCACCCTGTATCGCGACGACCTGATGCAAAAACCGCCGCGGCCGCTGGAGGCCACCTCGATCCCGGCCGGCGGCAT CGACGACGCGCTGGTGATCCTGGTCGACGACGTGCTCTACTCCGGCCGCTCGGTGCGCTCGGCACTGGACGCGCTGCGCG ACGTGGGCCGCCCGCGGGTGGTGCAACTGGCGGTGCTGGTCGACCGCGGTCACCGCGAGCTGCCGCTGCGCGCCGACTAC GTCGGCAAGAACGTCCCCACCTCGCGCAGTGAGAGCGTGCACGTGCTGCTGGCCGAGCACGACGGCGCCGACGGGGTGGT GATCTCGCGATGA
Upstream 100 bases:
>100_bases CGCCGCGCGCGGTCGCCCGCGAAATTAGTGCTACGCTGCCGTGCAGTCGACATCCTTTAACGATCCGTCCGGTGAGGCGG AGAAGGAGGTCAAGTTTCGC
Downstream 100 bases:
>100_bases CCCGCCACCTGCTCGCCGCCGGCGACCTGAGCCGCGACGACGCCACCGCCATCCTCGACGACGCCGACCGGTTCGCCCAG GCGCTGGTGGGCCGCGAGAT
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MGAAGNTGSSGDSRELMSAADVGRTISRIAHQIIEKTALDGPDGPRVVLLGIPTRGVTLADRLARNIGEYSGVEVGHGAL DITLYRDDLMQKPPRPLEATSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRVVQLAVLVDRGHRELPLRADY VGKNVPTSRSESVHVLLAEHDGADGVVISR
Sequences:
>Translated_190_residues MGAAGNTGSSGDSRELMSAADVGRTISRIAHQIIEKTALDGPDGPRVVLLGIPTRGVTLADRLARNIGEYSGVEVGHGAL DITLYRDDLMQKPPRPLEATSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRVVQLAVLVDRGHRELPLRADY VGKNVPTSRSESVHVLLAEHDGADGVVISR >Mature_189_residues GAAGNTGSSGDSRELMSAADVGRTISRIAHQIIEKTALDGPDGPRVVLLGIPTRGVTLADRLARNIGEYSGVEVGHGALD ITLYRDDLMQKPPRPLEATSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRVVQLAVLVDRGHRELPLRADYV GKNVPTSRSESVHVLLAEHDGADGVVISR
Specific function: Displays also a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 20113; Mature: 19982
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAAGNTGSSGDSRELMSAADVGRTISRIAHQIIEKTALDGPDGPRVVLLGIPTRGVTLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHH DRLARNIGEYSGVEVGHGALDITLYRDDLMQKPPRPLEATSIPAGGIDDALVILVDDVLY HHHHHHHHHHCCCEECCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCHHEEEHHHHH SGRSVRSALDALRDVGRPRVVQLAVLVDRGHRELPLRADYVGKNVPTSRSESVHVLLAEH CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEC DGADGVVISR CCCCCEEEEC >Mature Secondary Structure GAAGNTGSSGDSRELMSAADVGRTISRIAHQIIEKTALDGPDGPRVVLLGIPTRGVTLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHH DRLARNIGEYSGVEVGHGALDITLYRDDLMQKPPRPLEATSIPAGGIDDALVILVDDVLY HHHHHHHHHHCCCEECCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCHHEEEHHHHH SGRSVRSALDALRDVGRPRVVQLAVLVDRGHRELPLRADYVGKNVPTSRSESVHVLLAEH CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEC DGADGVVISR CCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA