| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is aroK
Identifier: 41407190
GI number: 41407190
Start: 1145827
End: 1146357
Strand: Direct
Name: aroK
Synonym: MAP1092
Alternate gene names: 41407190
Gene position: 1145827-1146357 (Clockwise)
Preceding gene: 41407189
Following gene: 41407191
Centisome position: 23.72
GC content: 74.95
Gene sequence:
>531_bases ATGGCGCCCAAAGCGGTGCTGATCGGGCTGCCGGGCTCCGGCAAGTCCACCATCGGGCGGCGGCTGGCCAAGGCGCTCGG GGTGGGTTTCCTGGACACCGATGCGGCCATCGAGCAGCGCACCGGCCGGCCCATCGCCGAGATCTTCGCCACCGACGGTG AGCGGGAGTTCCGCCGCATCGAGGAGGAGGTGGTGCGCGCGGCGCTGACCGAGCACGACGGCGTGCTGTCGCTGGGCGGC GGCGCGGTCACCAGCCCCGGGGTGCGCGAGGCGCTGGCCGGCCACACCGTCGTCTACCTGGAGATCAGCGCCACCGAGGG GGTGCGGCGCACCGGCGGCAACACGGTGCGCCCGCTGCTGGCCGGGCCGGATCGCGCCGAGAAGTACCGCGCGCTGCTGG CCGAGCGCAGCCCGCTGTACCGGCGGGCCGCCACCATCCGGGTCGACACCAACCGGCGCAACCCCGGCGCGGTGGTGCGC TACATCGTGTCGCGGCTGCCCGCCACCGATGCCTGCCGGGCCGCCACATGA
Upstream 100 bases:
>100_bases AGTTCGGCGGCGACTCGCTGGCCGAGACCCGCCGCAACATCGACGCCTACCGGCGGGCGGTCGCCGAGCGCGAGGCGCCG GCCGCCCGGGGAACCGCGTG
Downstream 100 bases:
>100_bases GAACCACCCGCGAACCGGTGACCGTGCAGGTGGCCGTCGACCCGCCCTACCCGGTGATCATCGGCACCGGGCTGCTGGGC GAGCTGGACGAACTGCTCGG
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MAPKAVLIGLPGSGKSTIGRRLAKALGVGFLDTDAAIEQRTGRPIAEIFATDGEREFRRIEEEVVRAALTEHDGVLSLGG GAVTSPGVREALAGHTVVYLEISATEGVRRTGGNTVRPLLAGPDRAEKYRALLAERSPLYRRAATIRVDTNRRNPGAVVR YIVSRLPATDACRAAT
Sequences:
>Translated_176_residues MAPKAVLIGLPGSGKSTIGRRLAKALGVGFLDTDAAIEQRTGRPIAEIFATDGEREFRRIEEEVVRAALTEHDGVLSLGG GAVTSPGVREALAGHTVVYLEISATEGVRRTGGNTVRPLLAGPDRAEKYRALLAERSPLYRRAATIRVDTNRRNPGAVVR YIVSRLPATDACRAAT >Mature_175_residues APKAVLIGLPGSGKSTIGRRLAKALGVGFLDTDAAIEQRTGRPIAEIFATDGEREFRRIEEEVVRAALTEHDGVLSLGGG AVTSPGVREALAGHTVVYLEISATEGVRRTGGNTVRPLLAGPDRAEKYRALLAERSPLYRRAATIRVDTNRRNPGAVVRY IVSRLPATDACRAAT
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=175, Percent_Identity=40.5714285714286, Blast_Score=101, Evalue=3e-23, Organism=Escherichia coli, GI1786587, Length=176, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_MYCA1 (A0QI60)
Other databases:
- EMBL: CP000479 - RefSeq: YP_882598.1 - ProteinModelPortal: A0QI60 - SMR: A0QI60 - STRING: A0QI60 - EnsemblBacteria: EBMYCT00000013254 - GeneID: 4528730 - GenomeReviews: CP000479_GR - KEGG: mav:MAV_3416 - TIGR: MAV_3416 - eggNOG: COG0703 - GeneTree: EBGT00050000016251 - HOGENOM: HBG335815 - OMA: MSISAFF - PhylomeDB: A0QI60 - ProtClustDB: PRK00131 - BioCyc: MAVI243243:MAV_3416-MONOMER - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 18757; Mature: 18625
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 34-34 BINDING 58-58 BINDING 80-80 BINDING 117-117 BINDING 136-136 BINDING 153-153
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKAVLIGLPGSGKSTIGRRLAKALGVGFLDTDAAIEQRTGRPIAEIFATDGEREFRRI CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHH EEEVVRAALTEHDGVLSLGGGAVTSPGVREALAGHTVVYLEISATEGVRRTGGNTVRPLL HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCEEEEEEEECCCCHHHCCCCCCCCCC AGPDRAEKYRALLAERSPLYRRAATIRVDTNRRNPGAVVRYIVSRLPATDACRAAT CCCCHHHHHHHHHHCCCCHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure APKAVLIGLPGSGKSTIGRRLAKALGVGFLDTDAAIEQRTGRPIAEIFATDGEREFRRI CCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHH EEEVVRAALTEHDGVLSLGGGAVTSPGVREALAGHTVVYLEISATEGVRRTGGNTVRPLL HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCEEEEEEEECCCCHHHCCCCCCCCCC AGPDRAEKYRALLAERSPLYRRAATIRVDTNRRNPGAVVRYIVSRLPATDACRAAT CCCCHHHHHHHHHHCCCCHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA