Click here to switch to the map view.

The map label for this gene is 41407164

Identifier: 41407164

GI number: 41407164

Start: 1118797

End: 1119855

Strand: Direct

Name: 41407164

Synonym: MAP1066

Alternate gene names: NA

Gene position: 1118797-1119855 (Clockwise)

Preceding gene: 41407163

Following gene: 41407166

Centisome position: 23.16

GC content: 76.2

Gene sequence:

>1059_bases
ATGCGCGGCTCGGCGGTGCCCTCGTTGGTGCGCACCGCCGTGCGGGCGGGCGGCAAGCGGCTGGGTGCGGTGTGGTTCAA
CCTGCTGCAGACGTCGCTGGCCGCCGGCCTGTCCTGGTACCTGGCCCACGACGTGCTGGACCATCCGCAACCGTTCTTCG
CGCCGATCGCCGCCGCGGTGTCGTTGTCGACCAGCAACGTGCTGCGCGCCCAACGGGCCGTCCAGATGATGATCGGGGTG
ACGCTGGGCATCGGGCTGGGCACCGTGGTGCAGGGGATGCTCGGTCCCGGCGCGCTGCCCATCGCGGTCGCCGCGCCGGT
CGCGCTGGGCGCCGCGGTGTTCATCGGGGGCGGCTTCATCGGGCACGGGATGATGTTCGCCAACCAGACCGTGGTCTCGG
CGCTGTTGGTGTTGGCCCTGTACCGCGGCGGCGCCGGGCCGGAACGCATCTTCGACGCGCTGATCGGCGGCGCGGTGGCC
ATCGTCGTCGCCGTGCTGCTGTTCCCCGCCGACCCGCGCACCGTGCTTGGCGCCGCCCGGGCCGGCGTGCTGGCGGTGCT
GCACGACGTGCTGTCCCGGGCCGCCGACGTTTCCTCCGGCCGCCGGGCGGCCCCGCCCGACTGGCCGCTGAGCGCCGTCG
ACCGGGTGCACGAACAGCTCAGCGGCCTGCTGGAGGCGCGCACCACCGCCTGGCACGTCGTCGCCATCGCGCCGCGACGC
TGGGGCCTGCGCGACGCCGTGCGCGCCGCCGACCATCAGGCCGTGCACGTCGCGCTGCTGGCCGGCTCGGTGCTGCAGCT
GGCCCGCGCGGTGGCCCCCGGCCCCGGCGACCGGCAGGGGCAGCCGGTGTCGACGGTACTGCTGGTGCTGGCGGCGGCGA
CCGCGCTGGCCGACCGCGATCCGGCCGGCGCGTGCGTGTATCTCGGGTCGGCGCGCCGGCACGCGGCGCGGCTGCGCTCC
GGCGACGGCGGCGACCGGGAGCCGCACGTCGCGCTGGCCGACGCCGTCGGCGCCTGCGTCGACGACCTGCAACGGGTGAT
CGACCTGCGGCCGGGGTGA

Upstream 100 bases:

>100_bases
GCTGTTCGCCCAGGTCGCCGCGGCCGCCTCCGGCTTTGCCGAGTACCAGGCTAAGACCAGCCGGGTGATCCCCCTGTTCG
AGCTGATCCGGACCTGACCG

Downstream 100 bases:

>100_bases
GGGGCTCACCGCGAGTCGGCCAGGAACTCCTGCACCAGTTTCCGCGGCGCCTGGGTCAGCCACGCCTCGGTGATCAGCTC
CTCGAGGTCGCGCACCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MRGSAVPSLVRTAVRAGGKRLGAVWFNLLQTSLAAGLSWYLAHDVLDHPQPFFAPIAAAVSLSTSNVLRAQRAVQMMIGV
TLGIGLGTVVQGMLGPGALPIAVAAPVALGAAVFIGGGFIGHGMMFANQTVVSALLVLALYRGGAGPERIFDALIGGAVA
IVVAVLLFPADPRTVLGAARAGVLAVLHDVLSRAADVSSGRRAAPPDWPLSAVDRVHEQLSGLLEARTTAWHVVAIAPRR
WGLRDAVRAADHQAVHVALLAGSVLQLARAVAPGPGDRQGQPVSTVLLVLAAATALADRDPAGACVYLGSARRHAARLRS
GDGGDREPHVALADAVGACVDDLQRVIDLRPG

Sequences:

>Translated_352_residues
MRGSAVPSLVRTAVRAGGKRLGAVWFNLLQTSLAAGLSWYLAHDVLDHPQPFFAPIAAAVSLSTSNVLRAQRAVQMMIGV
TLGIGLGTVVQGMLGPGALPIAVAAPVALGAAVFIGGGFIGHGMMFANQTVVSALLVLALYRGGAGPERIFDALIGGAVA
IVVAVLLFPADPRTVLGAARAGVLAVLHDVLSRAADVSSGRRAAPPDWPLSAVDRVHEQLSGLLEARTTAWHVVAIAPRR
WGLRDAVRAADHQAVHVALLAGSVLQLARAVAPGPGDRQGQPVSTVLLVLAAATALADRDPAGACVYLGSARRHAARLRS
GDGGDREPHVALADAVGACVDDLQRVIDLRPG
>Mature_352_residues
MRGSAVPSLVRTAVRAGGKRLGAVWFNLLQTSLAAGLSWYLAHDVLDHPQPFFAPIAAAVSLSTSNVLRAQRAVQMMIGV
TLGIGLGTVVQGMLGPGALPIAVAAPVALGAAVFIGGGFIGHGMMFANQTVVSALLVLALYRGGAGPERIFDALIGGAVA
IVVAVLLFPADPRTVLGAARAGVLAVLHDVLSRAADVSSGRRAAPPDWPLSAVDRVHEQLSGLLEARTTAWHVVAIAPRR
WGLRDAVRAADHQAVHVALLAGSVLQLARAVAPGPGDRQGQPVSTVLLVLAAATALADRDPAGACVYLGSARRHAARLRS
GDGGDREPHVALADAVGACVDDLQRVIDLRPG

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343 [H]

Pfam domain/function: PF06081 DUF939 [H]

EC number: NA

Molecular weight: Translated: 36088; Mature: 36088

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]