| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41406801
Identifier: 41406801
GI number: 41406801
Start: 725955
End: 726632
Strand: Direct
Name: 41406801
Synonym: MAP0703
Alternate gene names: NA
Gene position: 725955-726632 (Clockwise)
Preceding gene: 41406800
Following gene: 41406802
Centisome position: 15.03
GC content: 69.03
Gene sequence:
>678_bases ATGACCACCATCGGACGGCCCGTGCGCACCGAGCGGGCCAGCTCCACCCAGGAGGCGATCCTGGTGGCCGCCGAGCGGCT CTATGCCGAGCACGGCATGTTCGCCGTCTCCAATCGACAGGTCAGCGAGGCCGCCGGACAGGGCAACAACGCCGCGGTCG GTTACCACTTCGGCACCAAGGCCGATTTGGTGCGCGCCATCGAGCACAAGCACCGCGGGCCCGTCGAGCAGCTGCGCGAG CAGATGGTCGCCGAGCTGCTGGAGTCCGGCGCCGGGGGCGGCCGGGACGCCGAATTGCGTAGCTGGGTGGCCTGTTCGGT GCGCCCCCTCACCGACCACCTCGAGGAGCTGGGAAATCCGACCTGGTATGCGCGGTTCGCGGCGCAGGCGATGACCGATC CCGCCTACTACAACATCATCGTCAAGGGCGCGCTCAGCTCGCCGTCGCTGGTGCAGGTCGTCGAGGGCATCAACCGCTGC CTGCCCGACCTGCCGGCCGAGGTGCACTTCGAACGCAACATCATGGCTCGAAACCTGTTGATGCACACCTGCGCCGACCG TGAACGTGCGCTCGCCGCGGGCACGTCGACCTCCCATCGTTCCTGGCGGGCCGCGGCATCCGGCCTCATCGACGCGATCG TGGGCCTGTGGCTGGCGCCCGTGACGCCGTACGAGTGA
Upstream 100 bases:
>100_bases CGGCCGGCAAGGCGATGCGCTCGAAGCGGCAGGGATGACACCCGCCGAAATTTTAAATCAATCGCTTGACTTAAAGGCGC GGGCGCGGTTGACTGGCGCA
Downstream 100 bases:
>100_bases AGGACTGGGCAGATGAAAGTGACCGTCGACCAAGACCTTTGCGCATCGTCGGGGAACTGCGTGATGAATGCCCCCGAGGT GTTCGACCAGCGCGACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Tetr Family Transcriptional Regulator; Transcriptional Regulator
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTTIGRPVRTERASSTQEAILVAAERLYAEHGMFAVSNRQVSEAAGQGNNAAVGYHFGTKADLVRAIEHKHRGPVEQLRE QMVAELLESGAGGGRDAELRSWVACSVRPLTDHLEELGNPTWYARFAAQAMTDPAYYNIIVKGALSSPSLVQVVEGINRC LPDLPAEVHFERNIMARNLLMHTCADRERALAAGTSTSHRSWRAAASGLIDAIVGLWLAPVTPYE
Sequences:
>Translated_225_residues MTTIGRPVRTERASSTQEAILVAAERLYAEHGMFAVSNRQVSEAAGQGNNAAVGYHFGTKADLVRAIEHKHRGPVEQLRE QMVAELLESGAGGGRDAELRSWVACSVRPLTDHLEELGNPTWYARFAAQAMTDPAYYNIIVKGALSSPSLVQVVEGINRC LPDLPAEVHFERNIMARNLLMHTCADRERALAAGTSTSHRSWRAAASGLIDAIVGLWLAPVTPYE >Mature_224_residues TTIGRPVRTERASSTQEAILVAAERLYAEHGMFAVSNRQVSEAAGQGNNAAVGYHFGTKADLVRAIEHKHRGPVEQLREQ MVAELLESGAGGGRDAELRSWVACSVRPLTDHLEELGNPTWYARFAAQAMTDPAYYNIIVKGALSSPSLVQVVEGINRCL PDLPAEVHFERNIMARNLLMHTCADRERALAAGTSTSHRSWRAAASGLIDAIVGLWLAPVTPYE
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24502; Mature: 24371
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIGRPVRTERASSTQEAILVAAERLYAEHGMFAVSNRQVSEAAGQGNNAAVGYHFGTK CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCCEEEECCCCH ADLVRAIEHKHRGPVEQLREQMVAELLESGAGGGRDAELRSWVACSVRPLTDHLEELGNP HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC TWYARFAAQAMTDPAYYNIIVKGALSSPSLVQVVEGINRCLPDLPAEVHFERNIMARNLL HHHHHHHHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MHTCADRERALAAGTSTSHRSWRAAASGLIDAIVGLWLAPVTPYE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTIGRPVRTERASSTQEAILVAAERLYAEHGMFAVSNRQVSEAAGQGNNAAVGYHFGTK CCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCCEEEECCCCH ADLVRAIEHKHRGPVEQLREQMVAELLESGAGGGRDAELRSWVACSVRPLTDHLEELGNP HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC TWYARFAAQAMTDPAYYNIIVKGALSSPSLVQVVEGINRCLPDLPAEVHFERNIMARNLL HHHHHHHHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MHTCADRERALAAGTSTSHRSWRAAASGLIDAIVGLWLAPVTPYE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA