| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is CYP105B1 [H]
Identifier: 41406802
GI number: 41406802
Start: 726829
End: 728106
Strand: Direct
Name: CYP105B1 [H]
Synonym: MAP0704
Alternate gene names: 41406802
Gene position: 726829-728106 (Clockwise)
Preceding gene: 41406801
Following gene: 41406803
Centisome position: 15.05
GC content: 66.51
Gene sequence:
>1278_bases TTGAAGAATGACGACACGGCGAGGAACAACACCATGTCAGACACCCTGACGAGCACCGCGACCGAGCAGACCGCCGACAT TCCGGACTACCCGATGCCGCGGCAGGCCGGCTGCCCGTTCGCGCCGCCACCGGACGTCATGGCGCTGGCCCACGACAAGC CGTTGTCGCGGGTGCGGATCTGGGACGGCAGCACACCGTGGCTCATCACAGGCTATGAGCAAGTGCGCGAACTGTTTTCG GACTCGCGGGTCAGCGTCGACGACCGGCTGCCCGGCTTCCCGCACTGGAACGCGGGCATGCTGTCCACGGTGCACAAGCG TCCGCGGTCGGTCTTCACCGCCGACGGCGAAGAACACACCCGGTTCCGGCGCATGCTGTCAAAACCCTTCACGTTCAAGC GTGTCGAGGGTTTGCGCCCGACCATCCAGCAGATCACCGACGAGCACATCGACGCGATACTGGCCGGACCGAAACCGGCC GACATCGTCAGCGCGCTGGCCCTGCCGGTGCCCTCGCTGGTGATCAGCCAGCTGCTCGGGGTCCCCTACGAGGACGCCGA CATGTTCCAGCACCACGCCAACGTCGGCCTCGCGCGCTACGCCACCGGTGAGGACACCGTCAAAGGCGCGATGAGCCTCA ACAAATACCTCGCCCAGCTGGTCGAGGCCAAGATGGAGAACCCCGCCGAGGACGCGGTGTCCGATCTGGCCGAGCGGGTC AAGGCCGGGGAGCTCAGCGTGAAGGAGGCCGCGCAGCTGGGCACCGGCCTGCTGATCGCCGGGCACGAAACCACCTCGAA CATGATCGGTCTCGGCGTGCTCGCCCTGCTGGAAAACCCCGACCAGCTGGCCGTCATCCGGGACGCCGAAGACCCCAAGG TGATCGCCAGCGCAGTCGAGGAATTGCTGCGCTACCTCAGCATCATTCAGAACGGCCAGCGCCGCGTCGCGCTCGAAGAC ATCCACATCGCCGGGGAGACCATCCGGGCCGGTGAGGGGATCATCATCGACCTGGCCCCGGCGAACTGGGATGCGCGCGT CTTCCCCGAACCCGACCGGCTCTACCTGCATCGCTCCGGCGCCGACCGCAACGTCGCATTCGGCTACGGCCGCCATCAAT GCGTGGGCCAGCAGCTGGCGCGCGCCGAGCTGCAGATCGTGTTCCACTCCCTGGTACGCCGCATTCCCACACTGCAACTT GCGATTCCGATCGAGGAGGTCCCGTTCAAGGACGACCGCCTCGCCTACGGCGTCTACGAACTCCCGGTGACCTGGTAG
Upstream 100 bases:
>100_bases GACGACGGCGTCGTCGTCCTGCTCAACCCCCATCCCACGGCCGAGCAGGCGCAAGGCGCGCGGCGCGCGGCGGCGGCTTG CCCCGCCCTGGCCATCCGCG
Downstream 100 bases:
>100_bases CCCACGAAAGATTGCGGATCCGAATGGAGGGTCAATGATGACGACTCAAACAAGCCCCGTTTCCCTGTACCCGCCCGGAG GATACGGCGCCCCCAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: CYP105B1; Cytochrome P450-CVB1 [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKNDDTARNNTMSDTLTSTATEQTADIPDYPMPRQAGCPFAPPPDVMALAHDKPLSRVRIWDGSTPWLITGYEQVRELFS DSRVSVDDRLPGFPHWNAGMLSTVHKRPRSVFTADGEEHTRFRRMLSKPFTFKRVEGLRPTIQQITDEHIDAILAGPKPA DIVSALALPVPSLVISQLLGVPYEDADMFQHHANVGLARYATGEDTVKGAMSLNKYLAQLVEAKMENPAEDAVSDLAERV KAGELSVKEAAQLGTGLLIAGHETTSNMIGLGVLALLENPDQLAVIRDAEDPKVIASAVEELLRYLSIIQNGQRRVALED IHIAGETIRAGEGIIIDLAPANWDARVFPEPDRLYLHRSGADRNVAFGYGRHQCVGQQLARAELQIVFHSLVRRIPTLQL AIPIEEVPFKDDRLAYGVYELPVTW
Sequences:
>Translated_425_residues MKNDDTARNNTMSDTLTSTATEQTADIPDYPMPRQAGCPFAPPPDVMALAHDKPLSRVRIWDGSTPWLITGYEQVRELFS DSRVSVDDRLPGFPHWNAGMLSTVHKRPRSVFTADGEEHTRFRRMLSKPFTFKRVEGLRPTIQQITDEHIDAILAGPKPA DIVSALALPVPSLVISQLLGVPYEDADMFQHHANVGLARYATGEDTVKGAMSLNKYLAQLVEAKMENPAEDAVSDLAERV KAGELSVKEAAQLGTGLLIAGHETTSNMIGLGVLALLENPDQLAVIRDAEDPKVIASAVEELLRYLSIIQNGQRRVALED IHIAGETIRAGEGIIIDLAPANWDARVFPEPDRLYLHRSGADRNVAFGYGRHQCVGQQLARAELQIVFHSLVRRIPTLQL AIPIEEVPFKDDRLAYGVYELPVTW >Mature_425_residues MKNDDTARNNTMSDTLTSTATEQTADIPDYPMPRQAGCPFAPPPDVMALAHDKPLSRVRIWDGSTPWLITGYEQVRELFS DSRVSVDDRLPGFPHWNAGMLSTVHKRPRSVFTADGEEHTRFRRMLSKPFTFKRVEGLRPTIQQITDEHIDAILAGPKPA DIVSALALPVPSLVISQLLGVPYEDADMFQHHANVGLARYATGEDTVKGAMSLNKYLAQLVEAKMENPAEDAVSDLAERV KAGELSVKEAAQLGTGLLIAGHETTSNMIGLGVLALLENPDQLAVIRDAEDPKVIASAVEELLRYLSIIQNGQRRVALED IHIAGETIRAGEGIIIDLAPANWDARVFPEPDRLYLHRSGADRNVAFGYGRHQCVGQQLARAELQIVFHSLVRRIPTLQL AIPIEEVPFKDDRLAYGVYELPVTW
Specific function: Metabolism of a number of sulfonylurea herbicides [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46956; Mature: 46956
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDDTARNNTMSDTLTSTATEQTADIPDYPMPRQAGCPFAPPPDVMALAHDKPLSRVRI CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE WDGSTPWLITGYEQVRELFSDSRVSVDDRLPGFPHWNAGMLSTVHKRPRSVFTADGEEHT ECCCCCEEEECHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCHHHH RFRRMLSKPFTFKRVEGLRPTIQQITDEHIDAILAGPKPADIVSALALPVPSLVISQLLG HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHC VPYEDADMFQHHANVGLARYATGEDTVKGAMSLNKYLAQLVEAKMENPAEDAVSDLAERV CCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KAGELSVKEAAQLGTGLLIAGHETTSNMIGLGVLALLENPDQLAVIRDAEDPKVIASAVE HCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH ELLRYLSIIQNGQRRVALEDIHIAGETIRAGEGIIIDLAPANWDARVFPEPDRLYLHRSG HHHHHHHHHHCCCCEEEEEHEEECCCEEECCCCEEEEECCCCCCCEECCCCCEEEEEECC ADRNVAFGYGRHQCVGQQLARAELQIVFHSLVRRIPTLQLAIPIEEVPFKDDRLAYGVYE CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCEEEEEEE LPVTW CCCCC >Mature Secondary Structure MKNDDTARNNTMSDTLTSTATEQTADIPDYPMPRQAGCPFAPPPDVMALAHDKPLSRVRI CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE WDGSTPWLITGYEQVRELFSDSRVSVDDRLPGFPHWNAGMLSTVHKRPRSVFTADGEEHT ECCCCCEEEECHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCHHHH RFRRMLSKPFTFKRVEGLRPTIQQITDEHIDAILAGPKPADIVSALALPVPSLVISQLLG HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHC VPYEDADMFQHHANVGLARYATGEDTVKGAMSLNKYLAQLVEAKMENPAEDAVSDLAERV CCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KAGELSVKEAAQLGTGLLIAGHETTSNMIGLGVLALLENPDQLAVIRDAEDPKVIASAVE HCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH ELLRYLSIIQNGQRRVALEDIHIAGETIRAGEGIIIDLAPANWDARVFPEPDRLYLHRSG HHHHHHHHHHCCCCEEEEEHEEECCCEEECCCCEEEEECCCCCCCEECCCCCEEEEEECC ADRNVAFGYGRHQCVGQQLARAELQIVFHSLVRRIPTLQLAIPIEEVPFKDDRLAYGVYE CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCEEEEEEE LPVTW CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2345149 [H]