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The map label for this gene is yfdE [H]

Identifier: 41406774

GI number: 41406774

Start: 697312

End: 698352

Strand: Direct

Name: yfdE [H]

Synonym: MAP0676

Alternate gene names: 41406774

Gene position: 697312-698352 (Clockwise)

Preceding gene: 41406773

Following gene: 41406778

Centisome position: 14.44

GC content: 68.97

Gene sequence:

>1041_bases
TTGAGCGGCAACAACACCGGGCCGTTGGCGGGGATCCGTATCCTCGAGGTCGGCACCATGCTGGCGGGCCCGTACTCCAC
CATGCTGCTCGCCGATCTCGGCGCCGAGGTCACCAAGATCGAACCCGCCGGCGGCGAGATCTCCCGCAGCGTCGGCGCCA
CCTACTTCGCCAGCCTCAACCGCAACAAGTCCAGCATCTGCCTGGACCTCAATTCCGATGCGGGACAACGGCGGCTGGGT
GAGCTCGCCGCCGAATCCCACGCACTGCTGGTGAACCTGAAACCGTCCGCGATCCGCCGGCTCCGGCTCACCTACGACGA
CCTGCGGCGGCACAACGAGAAGATCGTCTGCGTTGCCATCACCGGTTTCGGGCTGTACGGCGGCGACGATCCGGCCTTCG
ACTACGTGGTGCAGGCGGGCGTGGGCACCGCCGCGCTGACCGGCGACCCGGATGGCCCGCCGACGCTGCCCGGCTATTCG
TCGGCCGACAACTCCACCGGGATGTGCGCGGCACTGGGGTTGCTGGCCAAGATCATCTCGGGCACCGGCGGCCAGGTGGA
CGTGTCGCTGCGCGACGTCATGCTGTCGCAGCTGAACTACCACGCGTCGGCGTACCTCAACAGCGGCGTCGAGCCGCAGC
GCCGCCCACACGGGGCGCACTCCTATTACGTTCCGGCGCAGCTGTTTCCGACCGCCGAAGGGTATCTGGCGCTGTTCATC
ACCCACGACGGCTTCTGGAAGTCGTTCGCGGCGGAGGCGGGTATCGGGGGGTTTGAAACCATGGCGGAGCGGGTGGCCCG
CCGCGACGAGGTGCTGGCCGTCGTCACCGCGATGCTGTCCACCGACAGCGCCGCCGGGTGGGAACGGCGGCTGCGTCCGC
TCGGGGTGCCGGCGGCGGCGGTCAGAACACTGCCCGAGGCGCTCGAGGCCACTCCGGAAGTCATTGTGACCGCGGGGGAA
TTCCGTCTGGTCGGCAGCCCGATCCACGTGTCGGGATACCAGCCCGAGTACCGTCCGCCGCCCCAGCTGCCGCAGTCGTA
G

Upstream 100 bases:

>100_bases
TGTCGGTGCGGCTGCTGCCCATCGGCGACAACCGCGACGAGCTGGTGGCCTCCAAGAGCCGGACCCGCGAGATGATCGCC
TCACTTGCCGCGGAGTTACG

Downstream 100 bases:

>100_bases
GGCATCACCGCCGCCGAGCGTGGAACTAAGTGCACGCTCGCGCGGCGGCTGCGCCCGCGGCGGCTGCGCCCGCCTCGCCT
ACGTCTGCCCCGCCAGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSGNNTGPLAGIRILEVGTMLAGPYSTMLLADLGAEVTKIEPAGGEISRSVGATYFASLNRNKSSICLDLNSDAGQRRLG
ELAAESHALLVNLKPSAIRRLRLTYDDLRRHNEKIVCVAITGFGLYGGDDPAFDYVVQAGVGTAALTGDPDGPPTLPGYS
SADNSTGMCAALGLLAKIISGTGGQVDVSLRDVMLSQLNYHASAYLNSGVEPQRRPHGAHSYYVPAQLFPTAEGYLALFI
THDGFWKSFAAEAGIGGFETMAERVARRDEVLAVVTAMLSTDSAAGWERRLRPLGVPAAAVRTLPEALEATPEVIVTAGE
FRLVGSPIHVSGYQPEYRPPPQLPQS

Sequences:

>Translated_346_residues
MSGNNTGPLAGIRILEVGTMLAGPYSTMLLADLGAEVTKIEPAGGEISRSVGATYFASLNRNKSSICLDLNSDAGQRRLG
ELAAESHALLVNLKPSAIRRLRLTYDDLRRHNEKIVCVAITGFGLYGGDDPAFDYVVQAGVGTAALTGDPDGPPTLPGYS
SADNSTGMCAALGLLAKIISGTGGQVDVSLRDVMLSQLNYHASAYLNSGVEPQRRPHGAHSYYVPAQLFPTAEGYLALFI
THDGFWKSFAAEAGIGGFETMAERVARRDEVLAVVTAMLSTDSAAGWERRLRPLGVPAAAVRTLPEALEATPEVIVTAGE
FRLVGSPIHVSGYQPEYRPPPQLPQS
>Mature_345_residues
SGNNTGPLAGIRILEVGTMLAGPYSTMLLADLGAEVTKIEPAGGEISRSVGATYFASLNRNKSSICLDLNSDAGQRRLGE
LAAESHALLVNLKPSAIRRLRLTYDDLRRHNEKIVCVAITGFGLYGGDDPAFDYVVQAGVGTAALTGDPDGPPTLPGYSS
ADNSTGMCAALGLLAKIISGTGGQVDVSLRDVMLSQLNYHASAYLNSGVEPQRRPHGAHSYYVPAQLFPTAEGYLALFIT
HDGFWKSFAAEAGIGGFETMAERVARRDEVLAVVTAMLSTDSAAGWERRLRPLGVPAAAVRTLPEALEATPEVIVTAGEF
RLVGSPIHVSGYQPEYRPPPQLPQS

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=376, Percent_Identity=30.3191489361702, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI300863124, Length=337, Percent_Identity=30.5637982195846, Blast_Score=141, Evalue=7e-34,
Organism=Homo sapiens, GI13376042, Length=337, Percent_Identity=28.1899109792285, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI300863126, Length=372, Percent_Identity=26.8817204301075, Blast_Score=111, Evalue=1e-24,
Organism=Escherichia coli, GI87082093, Length=360, Percent_Identity=27.7777777777778, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1786222, Length=329, Percent_Identity=28.2674772036474, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788717, Length=203, Percent_Identity=32.512315270936, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24648431, Length=324, Percent_Identity=36.7283950617284, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI24585488, Length=190, Percent_Identity=31.0526315789474, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 36611; Mature: 36480

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNNTGPLAGIRILEVGTMLAGPYSTMLLADLGAEVTKIEPAGGEISRSVGATYFASLN
CCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCHHEEEECC
RNKSSICLDLNSDAGQRRLGELAAESHALLVNLKPSAIRRLRLTYDDLRRHNEKIVCVAI
CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHCCHHHHHHCCCCEEEEEE
TGFGLYGGDDPAFDYVVQAGVGTAALTGDPDGPPTLPGYSSADNSTGMCAALGLLAKIIS
ECCEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GTGGQVDVSLRDVMLSQLNYHASAYLNSGVEPQRRPHGAHSYYVPAQLFPTAEGYLALFI
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCCEEEEEE
THDGFWKSFAAEAGIGGFETMAERVARRDEVLAVVTAMLSTDSAAGWERRLRPLGVPAAA
ECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHH
VRTLPEALEATPEVIVTAGEFRLVGSPIHVSGYQPEYRPPPQLPQS
HHHHHHHHHCCCCEEEEECCEEEECCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGNNTGPLAGIRILEVGTMLAGPYSTMLLADLGAEVTKIEPAGGEISRSVGATYFASLN
CCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCHHEEEECC
RNKSSICLDLNSDAGQRRLGELAAESHALLVNLKPSAIRRLRLTYDDLRRHNEKIVCVAI
CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHCCHHHHHHCCCCEEEEEE
TGFGLYGGDDPAFDYVVQAGVGTAALTGDPDGPPTLPGYSSADNSTGMCAALGLLAKIIS
ECCEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GTGGQVDVSLRDVMLSQLNYHASAYLNSGVEPQRRPHGAHSYYVPAQLFPTAEGYLALFI
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCCEEEEEE
THDGFWKSFAAEAGIGGFETMAERVARRDEVLAVVTAMLSTDSAAGWERRLRPLGVPAAA
ECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHH
VRTLPEALEATPEVIVTAGEFRLVGSPIHVSGYQPEYRPPPQLPQS
HHHHHHHHHCCCCEEEEECCEEEECCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]