| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406703
Identifier: 41406703
GI number: 41406703
Start: 629925
End: 630365
Strand: Direct
Name: 41406703
Synonym: MAP0605
Alternate gene names: NA
Gene position: 629925-630365 (Clockwise)
Preceding gene: 41406702
Following gene: 41406704
Centisome position: 13.04
GC content: 66.44
Gene sequence:
>441_bases GTGATGGACGAACGGCGGCGCAAGGGCCTCGAGAAGATGAACGAGGTCTACGGCTGGGAGATGCCCAACGTCGAGGGCGA CGCGTATTTCGACCTGACCGTCGACCACCTGTTCGGCAGCATCTGGACGCGGCCGGGCTTGTCGATGCGCGACAAGCGCA TCATGACGCTGACGGCGGTGACCGCGATCGGCAACCGCGATCTGGCCGAGATCCAGATCAACGCCGCGCTGCTCAACGGC GAGCTCACCGAGACCGAGCTCAAGGAGATGGCCGTCTTCCTCACCCATTACCTCGGTTTCCCGCTGGGCTCGGCGCTCAA CGGCGCGGTCGACGCCGTGGTGGCCAAGCGCAGGAAGGCCGCGGCCAAGGGCGCCGGCGAGGACAAGAAGGCCAACGTGG ACGCCGCATTGAAGATGCACTCGGGCGGTGAGCGGGGCTGA
Upstream 100 bases:
>100_bases TGGCGTTGGGTGAGGCGGTCTCGGTCGACCTGCCGCTGGCCCGGCTGGCGTACGAGGGACTGGCGGCCGGGCTCGGCGTG CCACACACGGAGAAAGAGGC
Downstream 100 bases:
>100_bases TCGCCCGCTAGAGTGGCGTGTCGTGCGCGTCCTGGTGATCGGCTCCGGTGCCCGTGAGCATGCGCTGCTGCTGGCGCTGC GCAAAGACCCGCAAGTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MMDERRRKGLEKMNEVYGWEMPNVEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAVTAIGNRDLAEIQINAALLNG ELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRRKAAAKGAGEDKKANVDAALKMHSGGERG
Sequences:
>Translated_146_residues MMDERRRKGLEKMNEVYGWEMPNVEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAVTAIGNRDLAEIQINAALLNG ELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRRKAAAKGAGEDKKANVDAALKMHSGGERG >Mature_146_residues MMDERRRKGLEKMNEVYGWEMPNVEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAVTAIGNRDLAEIQINAALLNG ELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRRKAAAKGAGEDKKANVDAALKMHSGGERG
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16025; Mature: 16025
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDERRRKGLEKMNEVYGWEMPNVEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAV CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEHHHHHH TAIGNRDLAEIQINAALLNGELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRRKA HHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AAKGAGEDKKANVDAALKMHSGGERG HHCCCCCCCCCCHHHEEEECCCCCCC >Mature Secondary Structure MMDERRRKGLEKMNEVYGWEMPNVEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAV CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEHHHHHH TAIGNRDLAEIQINAALLNGELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRRKA HHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AAKGAGEDKKANVDAALKMHSGGERG HHCCCCCCCCCCHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA