| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fabG
Identifier: 41406659
GI number: 41406659
Start: 585296
End: 586210
Strand: Direct
Name: fabG
Synonym: MAP0561
Alternate gene names: 41406659
Gene position: 585296-586210 (Clockwise)
Preceding gene: 41406658
Following gene: 41406660
Centisome position: 12.12
GC content: 69.95
Gene sequence:
>915_bases TTGACTAGCAGCACGAACGCGACCGATCTGTCCGGAAAGGTCGCGGTGGTGACCGGTGCGGCCGCGGGCCTGGGACGCGC CGAGGCGCTCGGGCTGGCACGCCTGGGCGCGACCGTCGTCGTCAACGACATCGCCACCGCGCTGGACGCCTCCGACGTCA TCGACGAGATCAACGCCGCCGGCTCCAAGGCCGTCGCGGTGGCCGGCGACATCAGCGAACGCGCCACCGCCGACGAATTG GTTGCTCAGGCCGACGGGCTGGGCGGGCTGGACATCGTGGTGAACAACGCCGGCATCACCCGCGACCGGATGCTGTTCAA CATGTCCGACGAGGAGTGGGACCTGGTCATCGCCGTGCACCTGCGCGGCCACTTCCTGCTGACCCGCAACGCCGCCGCCT ACTGGCGCTCGAGGGCCAAGGAGGCCGGCGGCCGGATCTTCGGCCGCATCGTCAACACCGCGTCGGAGGCCGGCCTGGTC GGCCCGGTCGGGCAGGCGAACTACGGCGCCGCCAAGGCCGGCATCATCTCGCTGACCCTGACGGCCGCCCGCGCGCTGGG CCGCTACGGCGTGTGCGCCAACGCGATCTGCCCCCGGGCGCGCACCGCGATGACGGCCGACGTGTTCGGCGATGCGCCCG AGGTCCCGGCCGGCGGGGTCGACCCGCTGTCGCCCGAGCATGTGGTCAACCTGGTCACGTTCCTGTCGTCGCCGGCCGCC GCCGAAGTGAACGGGCAGGTGTTCATCGTCTACGGTCCACAGGTGACACTTGTCGCTGCGCCGACCGCCGAGCACAAATT CAGCGCGCAAGGCCCCGCGTGGGACCCCGCCGAACTCAGCGCGACGTTGCAGGATTACTTTGCTGGACGTGATCCCGAGC ACAATTTTTCGGCGAGCGCACTGATGGAGCAATAG
Upstream 100 bases:
>100_bases GGAGCAGTTGGCCGAGCAGGCGATCGCCGAATGCCCGCGCGCGGCGCTGTCGCGCGGCGACTGAACCGGGCGGAACACAG AAACTAGAGGTATTCATAAA
Downstream 100 bases:
>100_bases CTGGGGGCAGCTAATCGGCGGGGGGAAATCAGCAGGTAGAACGTGTGTCAGTTTGACACGTGACAAGTGCGTCTGACCTG CTGAATTAACGGTTGGGATA
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTSSTNATDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDIATALDASDVIDEINAAGSKAVAVAGDISERATADEL VAQADGLGGLDIVVNNAGITRDRMLFNMSDEEWDLVIAVHLRGHFLLTRNAAAYWRSRAKEAGGRIFGRIVNTASEAGLV GPVGQANYGAAKAGIISLTLTAARALGRYGVCANAICPRARTAMTADVFGDAPEVPAGGVDPLSPEHVVNLVTFLSSPAA AEVNGQVFIVYGPQVTLVAAPTAEHKFSAQGPAWDPAELSATLQDYFAGRDPEHNFSASALMEQ
Sequences:
>Translated_304_residues MTSSTNATDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDIATALDASDVIDEINAAGSKAVAVAGDISERATADEL VAQADGLGGLDIVVNNAGITRDRMLFNMSDEEWDLVIAVHLRGHFLLTRNAAAYWRSRAKEAGGRIFGRIVNTASEAGLV GPVGQANYGAAKAGIISLTLTAARALGRYGVCANAICPRARTAMTADVFGDAPEVPAGGVDPLSPEHVVNLVTFLSSPAA AEVNGQVFIVYGPQVTLVAAPTAEHKFSAQGPAWDPAELSATLQDYFAGRDPEHNFSASALMEQ >Mature_303_residues TSSTNATDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDIATALDASDVIDEINAAGSKAVAVAGDISERATADELV AQADGLGGLDIVVNNAGITRDRMLFNMSDEEWDLVIAVHLRGHFLLTRNAAAYWRSRAKEAGGRIFGRIVNTASEAGLVG PVGQANYGAAKAGIISLTLTAARALGRYGVCANAICPRARTAMTADVFGDAPEVPAGGVDPLSPEHVVNLVTFLSSPAAA EVNGQVFIVYGPQVTLVAAPTAEHKFSAQGPAWDPAELSATLQDYFAGRDPEHNFSASALMEQ
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4504505, Length=250, Percent_Identity=41.2, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI15277342, Length=263, Percent_Identity=38.4030418250951, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI4758504, Length=196, Percent_Identity=33.6734693877551, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI19923817, Length=253, Percent_Identity=30.0395256916996, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI83715985, Length=189, Percent_Identity=33.8624338624339, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI31542939, Length=194, Percent_Identity=34.020618556701, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI209862901, Length=202, Percent_Identity=32.6732673267327, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI19923983, Length=202, Percent_Identity=32.6732673267327, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=30.0813008130081, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=35.0597609561753, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI1789208, Length=264, Percent_Identity=29.5454545454545, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=29.3650793650794, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=29.5719844357977, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87082160, Length=256, Percent_Identity=27.34375, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786812, Length=265, Percent_Identity=30.188679245283, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=31.3253012048193, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=32.156862745098, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789057, Length=265, Percent_Identity=29.4339622641509, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367175, Length=191, Percent_Identity=33.5078534031414, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789378, Length=194, Percent_Identity=30.4123711340206, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17568967, Length=248, Percent_Identity=38.7096774193548, Blast_Score=155, Evalue=2e-38, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17555706, Length=256, Percent_Identity=32.8125, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=31.0880829015544, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI193203117, Length=230, Percent_Identity=30.4347826086957, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193203115, Length=231, Percent_Identity=30.3030303030303, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17538182, Length=194, Percent_Identity=34.020618556701, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17562908, Length=253, Percent_Identity=30.0395256916996, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17561402, Length=260, Percent_Identity=26.9230769230769, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193204405, Length=224, Percent_Identity=29.0178571428571, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562906, Length=221, Percent_Identity=32.1266968325792, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17555612, Length=271, Percent_Identity=29.8892988929889, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71997099, Length=207, Percent_Identity=31.4009661835749, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17559104, Length=218, Percent_Identity=32.1100917431193, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562910, Length=282, Percent_Identity=26.5957446808511, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115534694, Length=255, Percent_Identity=28.2352941176471, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71982365, Length=139, Percent_Identity=32.3741007194245, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=248, Percent_Identity=38.7096774193548, Blast_Score=149, Evalue=6e-37, Organism=Drosophila melanogaster, GI18859837, Length=253, Percent_Identity=39.5256916996047, Blast_Score=142, Evalue=2e-34, Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=37.6984126984127, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI17737361, Length=192, Percent_Identity=35.9375, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI23397609, Length=191, Percent_Identity=34.0314136125654, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24644339, Length=210, Percent_Identity=29.0476190476191, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24649181, Length=167, Percent_Identity=32.3353293413174, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 31197; Mature: 31066
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSTNATDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDIATALDASDVIDEINAA CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEHHHHHHHCHHHHHHHHHCC GSKAVAVAGDISERATADELVAQADGLGGLDIVVNNAGITRDRMLFNMSDEEWDLVIAVH CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHEEEECCCCCEEEEEEEE LRGHFLLTRNAAAYWRSRAKEAGGRIFGRIVNTASEAGLVGPVGQANYGAAKAGIISLTL ECCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCEEEEHH TAARALGRYGVCANAICPRARTAMTADVFGDAPEVPAGGVDPLSPEHVVNLVTFLSSPAA HHHHHHHCCCCHHHHCCCCHHHHEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC AEVNGQVFIVYGPQVTLVAAPTAEHKFSAQGPAWDPAELSATLQDYFAGRDPEHNFSASA EECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH LMEQ HHCC >Mature Secondary Structure TSSTNATDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDIATALDASDVIDEINAA CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEHHHHHHHCHHHHHHHHHCC GSKAVAVAGDISERATADELVAQADGLGGLDIVVNNAGITRDRMLFNMSDEEWDLVIAVH CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHEEEECCCCCEEEEEEEE LRGHFLLTRNAAAYWRSRAKEAGGRIFGRIVNTASEAGLVGPVGQANYGAAKAGIISLTL ECCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCEEEEHH TAARALGRYGVCANAICPRARTAMTADVFGDAPEVPAGGVDPLSPEHVVNLVTFLSSPAA HHHHHHHCCCCHHHHCCCCHHHHEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC AEVNGQVFIVYGPQVTLVAAPTAEHKFSAQGPAWDPAELSATLQDYFAGRDPEHNFSASA EECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH LMEQ HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]