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The map label for this gene is yrbE [C]

Identifier: 41406660

GI number: 41406660

Start: 586447

End: 587211

Strand: Direct

Name: yrbE [C]

Synonym: MAP0562

Alternate gene names: 41406660

Gene position: 586447-587211 (Clockwise)

Preceding gene: 41406659

Following gene: 41406661

Centisome position: 12.14

GC content: 65.1

Gene sequence:

>765_bases
TTGATCGAACAACTTGCGGTCCCCGCCCGCGCCGTCGGCGGTTTCTTCGAAATGATGATCGATACCGGCCGGGCGGCGTT
TCGCCGGCCGTTCCAGTTCGGCGAGTTCTTGGATCAGACGTGGATGATCGCCCGGGTGTCGCTGGTGCCCACGCTGTTGG
TGTCGATCCCGTTCACGGTGTTGGTGGCGTTCACCTTGAACATCCTGCTGCGCGAGATCGGCGCGGCCGACCTCTCGGGG
GCCGGCACGGCGTTCGGCACCATCACCCAGCTGGGTCCGGTGGTGACGGTGCTGGTGGTGGCCGGCGCGGGTGCGACGGC
GATCTGCGCGGATCTGGGTGCGCGCACCATCCGCGAGGAGATCGACGCGATGCGGGTGCTGGGCATCGACCCGATCCACC
GGCTGGTGGTGCCCCGGGTGCTGGCGTCGACGGTGGTGGCGTTGCTGCTCAACGGATTGGTCTGTGCCATCGGGCTTTCC
GGTGGGTATGTGTTCTCGGTCTTTCTGCAGGGCGTCAACCCGGGTGCGTTCATCAACGGGCTGACGGTGCTGACCGGTCT
GCGTGAATTGGTGCTGGCCGAGGTCAAGGCACTGCTGTTCGGGGTGATGGCCGGGATGGTGGGCTGTTATCGCGGGCTGA
CCGTCAAGGGCGGGCCCAAGGGGGTGGGCAACGCGGTCAACGAGACCGTTGTCTATGCGTTCATTTGTCTGTTCGTGATC
AATGTGGTGATGACCGCCATCGGCGTGCGAATCTCGGCGAAGTGA

Upstream 100 bases:

>100_bases
GAGTTAATATGATCCGGCTCACACGGGCCCGGGTGCGAACCTAAACGACGCAAAGGCCAGCCATAGACTTCGCCGAGACC
TATCGAGGGGGGAACTCAAG

Downstream 100 bases:

>100_bases
TGGGACGGGTGGGCACGCCATGAGTTATGACGCCACGCTGCGATTTCGGCGGTGGTTCTCGCGGCTGCAGGAACCGGTCG
ACGACTTCGGCGAGCAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MIEQLAVPARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSG
AGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLS
GGYVFSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
NVVMTAIGVRISAK

Sequences:

>Translated_254_residues
MIEQLAVPARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSG
AGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLS
GGYVFSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
NVVMTAIGVRISAK
>Mature_254_residues
MIEQLAVPARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSG
AGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLS
GGYVFSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
NVVMTAIGVRISAK

Specific function: Could be part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=165, Percent_Identity=26.6666666666667, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26581; Mature: 26581

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQLAVPARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTV
CCCCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IDAMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHH
LTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NVVMTAIGVRISAK
HHHHHHHCCCEECC
>Mature Secondary Structure
MIEQLAVPARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTV
CCCCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IDAMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHH
LTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NVVMTAIGVRISAK
HHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]