| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is caiE [H]
Identifier: 41406638
GI number: 41406638
Start: 565675
End: 566199
Strand: Direct
Name: caiE [H]
Synonym: MAP0540
Alternate gene names: 41406638
Gene position: 565675-566199 (Clockwise)
Preceding gene: 41406637
Following gene: 41406643
Centisome position: 11.71
GC content: 72.95
Gene sequence:
>525_bases ATGCCGCTGTTTGCTTTCGAGGGCCGCTCGCCGCGGGTGGACCCCACCGCCTTCGTGGCGCCGACGGCCACCCTGATCGG CGACGTGGTCGTGGAGGCGGGGGCTTCGGTCTGGTTCAACGCGGTGCTGCGCGGCGACTACGGGCCCATCGTGGTGCGCG AGGGCGCCAACGTCCAGGACGGTTCGGTGCTGCACGCGCCCCCCGGCATCCCGGTCGACATCGGTCCGGGGGCGACGGTG GCGCATCTGTGCGTCATCCACGGCGCGCACGTCGGCCCCGAGGCGCTGATCGCCAACCACGCCACCGTGCTGGACGGCGC GGTGATCGGCGCGGGCAGCCTGGTGGCGGCGCATTCGCTGGTCACCGCGGGCACCCAGATTCCGGCCGGGATGCTGGCCA TGGGCGCGCCGGCCCAGATCAAGGGCCCGGTCGCCGGTACCGACGCGCAGCTGTGGGTCAAGCTGAATCCGCAGGCCTAC CGCGACCTCGCCCAGCGGCATCTGGCCGGGCTGGAACCGATCTAG
Upstream 100 bases:
>100_bases TAACTAGAACACGTTACAGTTTTGCGCCGGGCCCGCGCAACGAAGGCAAGCCTGCCTGGGCCGTTCCGCGAGTTCGGCGG CGCTCAGGTATATCTAGACG
Downstream 100 bases:
>100_bases CGGCCCCGCGTTAGCCGGAGATCTTCTTGGTGTTGGCGGCCGCGCGGTCCATCTCCCAATAGGCGCGCAGCGCGACCAGC TTGCCCTCGTCGTCGGCCTT
Product: hypothetical protein
Products: cofactor [C]
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MPLFAFEGRSPRVDPTAFVAPTATLIGDVVVEAGASVWFNAVLRGDYGPIVVREGANVQDGSVLHAPPGIPVDIGPGATV AHLCVIHGAHVGPEALIANHATVLDGAVIGAGSLVAAHSLVTAGTQIPAGMLAMGAPAQIKGPVAGTDAQLWVKLNPQAY RDLAQRHLAGLEPI
Sequences:
>Translated_174_residues MPLFAFEGRSPRVDPTAFVAPTATLIGDVVVEAGASVWFNAVLRGDYGPIVVREGANVQDGSVLHAPPGIPVDIGPGATV AHLCVIHGAHVGPEALIANHATVLDGAVIGAGSLVAAHSLVTAGTQIPAGMLAMGAPAQIKGPVAGTDAQLWVKLNPQAY RDLAQRHLAGLEPI >Mature_173_residues PLFAFEGRSPRVDPTAFVAPTATLIGDVVVEAGASVWFNAVLRGDYGPIVVREGANVQDGSVLHAPPGIPVDIGPGATVA HLCVIHGAHVGPEALIANHATVLDGAVIGAGSLVAAHSLVTAGTQIPAGMLAMGAPAQIKGPVAGTDAQLWVKLNPQAYR DLAQRHLAGLEPI
Specific function: Overproduction of CaiE stimulates the activity of CaiB and CaiD [H]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI87081681, Length=166, Percent_Identity=43.3734939759036, Blast_Score=132, Evalue=1e-32, Organism=Escherichia coli, GI1787667, Length=166, Percent_Identity=39.1566265060241, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI87082240, Length=154, Percent_Identity=27.9220779220779, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17618; Mature: 17487
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFAFEGRSPRVDPTAFVAPTATLIGDVVVEAGASVWFNAVLRGDYGPIVVREGANVQD CCEEECCCCCCCCCCCEEECCHHHHHHHHHHHCCCHHEEHHHEECCCCCEEEECCCCCCC GSVLHAPPGIPVDIGPGATVAHLCVIHGAHVGPEALIANHATVLDGAVIGAGSLVAAHSL CCEEECCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHCCEEECCCHHHHHHHH VTAGTQIPAGMLAMGAPAQIKGPVAGTDAQLWVKLNPQAYRDLAQRHLAGLEPI HHCCCCCCCCCEECCCCCEECCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PLFAFEGRSPRVDPTAFVAPTATLIGDVVVEAGASVWFNAVLRGDYGPIVVREGANVQD CEEECCCCCCCCCCCEEECCHHHHHHHHHHHCCCHHEEHHHEECCCCCEEEECCCCCCC GSVLHAPPGIPVDIGPGATVAHLCVIHGAHVGPEALIANHATVLDGAVIGAGSLVAAHSL CCEEECCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHCCEEECCCHHHHHHHH VTAGTQIPAGMLAMGAPAQIKGPVAGTDAQLWVKLNPQAYRDLAQRHLAGLEPI HHCCCCCCCCCEECCCCCEECCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pre-cofactor [C]
Specific reaction: pre-cofactor = cofactor [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA