Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41406633

Identifier: 41406633

GI number: 41406633

Start: 560881

End: 562008

Strand: Direct

Name: 41406633

Synonym: MAP0535

Alternate gene names: NA

Gene position: 560881-562008 (Clockwise)

Preceding gene: 41406632

Following gene: 41406634

Centisome position: 11.61

GC content: 66.67

Gene sequence:

>1128_bases
GTGTTCTCTGATCCGCTCACCTCCGCGATCGCCGAGGCCGAAAATCTGGTGGCCGCCGCACCGCACATCGAGACCGAAGC
CGACCTGCTGGAGGGACTGCAGTACCTGGCCGGCTGCATCTCGGCCTGTATCCACCTGGCGGTCGACTACGAGCGCGACC
ACCCCTTCCTGCAATCGGGCACCGGGCCGTTCACCAAGATGGGCCTGGACAACCCCGACACGCTGTACTTCGGCACCCGG
GTGCACGCCGGCTACGACTACGTCGTCACCGGCCGCCGCGGCACCACCACCGATTTGAGTTTTCAGCTGCTCGGCGGCGA
GTACACCGACGACAACGTGCCGGCCAGCCAGGCCGCGTTCGACGACCGCGAGCTCGACATCGCGCCCGACGGCAGCTTCG
AGTGGCGGGTGCGACCGACCAGCAACGGCCAGCTGGTGATCCGCGAGGTGTACGGCGACTGGGCCGCCCAGCGCGGCACC
CTGGCCATCGCACGGGAGGACACCGCGGGCACCGCGCCGCCGCCGCTGACCCGCGAGACGATCGAAAAGCGTTATGCCAC
AGCCGGAAAACAACTCGTGAACCGGGTGAAGACCTGGCTGCAGTTCCCGCAGTGGTTCTACTTCAACATCCCGGTCAACA
CCATGGTCGCGCCCCGGTTGACGCCGGGCGGGCTGGCGACGCAGTACTCGTCGGCCGGGCACTACGAACTGCGGCCCGAC
CAGGCGCTGCTGATCACCATCCCGGTCACCGACGCCCCCTACCTCGGGTTCCAACTGGGCAGCCTGTGGTACATCTCGCT
GGACTACATCAACCATCAGACGTCGCTGAACAACACTCAGGCGCAAGCGGATCCGGACGGCAAGGTGCGCATCGTCGTCG
CCGAGCAGAACCCGGGCGTGACGAACTGGGTGGAGACGGTCGGGCATCGGAAGGGCTTCCTGCAGTTCCGCTGGCAACGG
GTGTCGCGCCAGCTCACCGAGGCCGACGGCCCCACCGTCGAGCTGGTCGACTTCGACGCCGTACCCGCCAAGCTGCCCTA
CTACGAGCACAACAAGATCTCCGACGACGAATGGCGGGCGCGAATCGCGTTGCGTCAACAACAGATTGCGGCAAGGATGC
TGGGGTGA

Upstream 100 bases:

>100_bases
GCCCGCCCTAGGTGAGCCGGCCTCGTCGCGCGACGCCGTGGGCGACGCGCGGGAACGTTCGCCATTGACGAAAAAGTAGA
ACACGTTCTAGCGTCTAGGC

Downstream 100 bases:

>100_bases
CGATGGCAGGGATGCTCGACGGCAAGGTGGTGGTCATCAGCGGCGTGGGGCCGGGGCTGGGCACCACGCTGGCGCACCGA
TGCGCCGACAGCGGGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTR
VHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAFDDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGT
LAIAREDTAGTAPPPLTRETIEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD
QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGVTNWVETVGHRKGFLQFRWQR
VSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRARIALRQQQIAARMLG

Sequences:

>Translated_375_residues
MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTR
VHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAFDDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGT
LAIAREDTAGTAPPPLTRETIEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD
QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGVTNWVETVGHRKGFLQFRWQR
VSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRARIALRQQQIAARMLG
>Mature_375_residues
MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTR
VHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAFDDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGT
LAIAREDTAGTAPPPLTRETIEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD
QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGVTNWVETVGHRKGFLQFRWQR
VSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRARIALRQQQIAARMLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41793; Mature: 41793

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSG
CCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCC
TGPFTKMGLDNPDTLYFGTRVHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAF
CCCCEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHCC
DDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGTLAIAREDTAGTAPPPLTRET
CCCCEEECCCCCEEEEEEECCCCCEEEEEECCCHHHCCCEEEEEECCCCCCCCCCCCHHH
IEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEECCCCCCCCCHHCCCCCCCEEECCC
QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGV
CEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCH
TNWVETVGHRKGFLQFRWQRVSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRA
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH
RIALRQQQIAARMLG
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSG
CCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCC
TGPFTKMGLDNPDTLYFGTRVHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAF
CCCCEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHCC
DDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGTLAIAREDTAGTAPPPLTRET
CCCCEEECCCCCEEEEEEECCCCCEEEEEECCCHHHCCCEEEEEECCCCCCCCCCCCHHH
IEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEECCCCCCCCCHHCCCCCCCEEECCC
QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGV
CEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCH
TNWVETVGHRKGFLQFRWQRVSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRA
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH
RIALRQQQIAARMLG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA