| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cyp125 [H]
Identifier: 41406620
GI number: 41406620
Start: 547992
End: 549242
Strand: Direct
Name: cyp125 [H]
Synonym: MAP0522
Alternate gene names: 41406620
Gene position: 547992-549242 (Clockwise)
Preceding gene: 41406616
Following gene: 41406621
Centisome position: 11.35
GC content: 65.79
Gene sequence:
>1251_bases GTGCCCAGTCCGAATCTTCCACCCGGGTTCGACCTTCTGGACCCGGACGTCTGCGTCAAGGGCCTGCCGGTCGCCGAATT AGCCGAACTGCGCAAGTCCGCGCCAATCTACTGGGTGGACGTCCCCGGCGGGACCGGCGGCTTCGGTGACAAAGGCTATT GGGCGATCACCAAGCACAAGGACGTCAAAGAGATCTCCGTGCGCAGCGACATCTTCTCGTCGCAGCAGGACTGCGCCATC CCGGTCTGGCCGAAGGAGATGACGCGCGAGCAGATCGACCTGCAGCGCAACGTCATGCTCAACATGGACGCGCCGCACCA CACCCGGCTGCGCAAGATCATCTCGCGCGGTTTCACCCCGCGGGCCGTCGGCCGGCTGCGTGACGAGCTGGACGCCCGCG CGCAGAACATCGCCAAGACCGCCGCCGCGGCCGGCGCCGGCGACTTCGTCGAGCAGGTCTCCTGCGAGCTGCCGCTGCAG GCCATCGCCGGTCTGCTGGGTGTTCCGCAGGAGGACCGGGACAAGATCTTCCGCTGGTCCAACGAGATGACCGGCAACGA GGACCCCGAGTACGCGCACATCGACCCGGCGATGTCGTCGGCCGAGCTGATCATGTACGCGATGAAGATGGCCGAGGAGC GGGCCAAGAACCCCGGCGACGACATCGTCACCCAGCTGATCCAGGCCGACCTCGACGGCGAGAAGCTCTCCGACGACGAA TTCGGTTTCTTCGTGGTGATGCTCGCGGTCGCCGGCAACGAGACCACCCGGAACTCGATCACGCACGGCATGATCGCCTT CGCCGACAACCCCGACCAGTGGGAGCTGTTCAAGAAGGAGCGCCCGGAGACCGCGCCGGACGAAATCGTCCGCTGGGCAA CGCCGGTCACGGCGTTCCAGCGCACCGCGCTCGAGGATTACGAGCTGTCCGGGGTGCAGATCAAGAAGGGCCAGCGGGTG GTGATGTTCTACCGCTCGGCGAACTTCGACGAAGAGGTCTTCGAGGATCCGCACCGCTTCAACATCTTGCGAAACCCCAA CCCGCACGTCGGTTTTGGCGGTACGGGTGCGCACTACTGCATCGGCGCCAACCTGGCCCGGATGACCATCAGCCTGATCT TCAACGCCGTGGCCGACCACATGCCGGACCTCAAGCCGCTGTCGGCGCCCGAGCGGTTGCGGTCGGGCTGGCTCAACGGC ATCAAGCACTGGCAGGTCGACTACACCGGCAAGTGCCCGGTGGCGCACTGA
Upstream 100 bases:
>100_bases TGTCTGCGGTGGAGGCATGTTTTACTGGCACCAGAGCATCACTAGGACAGCTAGTGTCCTGGGATCGCAAGTCAGCGAGG ACTGTAGTTAGGAGAAGAGC
Downstream 100 bases:
>100_bases GATGGCGTCAGAAACGACGATGGACTTCGACCCCAGTCCGACACAACAGGCGGTCGCCGACGTCGTCACGTCGGTGCTGG ACCGCGAATTGAGTTGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHKDVKEISVRSDIFSSQQDCAI PVWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTPRAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQ AIAGLLGVPQEDRDKIFRWSNEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDE FGFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQRTALEDYELSGVQIKKGQRV VMFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYCIGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNG IKHWQVDYTGKCPVAH
Sequences:
>Translated_416_residues MPSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHKDVKEISVRSDIFSSQQDCAI PVWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTPRAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQ AIAGLLGVPQEDRDKIFRWSNEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDE FGFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQRTALEDYELSGVQIKKGQRV VMFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYCIGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNG IKHWQVDYTGKCPVAH >Mature_415_residues PSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHKDVKEISVRSDIFSSQQDCAIP VWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTPRAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQA IAGLLGVPQEDRDKIFRWSNEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDEF GFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQRTALEDYELSGVQIKKGQRVV MFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYCIGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNGI KHWQVDYTGKCPVAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46400; Mature: 46269
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHK CCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCC DVKEISVRSDIFSSQQDCAIPVWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTP CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCH RAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQAIAGLLGVPQEDRDKIFRWS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHC NEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDE CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC FGFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQ CCHHHHHHHHHCCCHHHHHHHCCEEEECCCCCHHHHHHHCCCCCCHHHHHHHCCHHHHHH RTALEDYELSGVQIKKGQRVVMFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYC HHHHCCCCCCCEEEECCCEEEEEEECCCCCHHHHCCCHHEEEECCCCCCCCCCCCCCCCE IGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNGIKHWQVDYTGKCPVAH ECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCC >Mature Secondary Structure PSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHK CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCC DVKEISVRSDIFSSQQDCAIPVWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTP CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCH RAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQAIAGLLGVPQEDRDKIFRWS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHC NEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDE CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC FGFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQ CCHHHHHHHHHCCCHHHHHHHCCEEEECCCCCHHHHHHHCCCCCCHHHHHHHCCHHHHHH RTALEDYELSGVQIKKGQRVVMFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYC HHHHCCCCCCCEEEECCCEEEEEEECCCCCHHHHCCCHHEEEECCCCCCCCCCCCCCCCE IGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNGIKHWQVDYTGKCPVAH ECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]