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The map label for this gene is glpQ [H]

Identifier: 41406578

GI number: 41406578

Start: 506684

End: 507577

Strand: Direct

Name: glpQ [H]

Synonym: MAP0480

Alternate gene names: 41406578

Gene position: 506684-507577 (Clockwise)

Preceding gene: 41406577

Following gene: 41406580

Centisome position: 10.49

GC content: 70.58

Gene sequence:

>894_bases
ATGGCGGTGCTGCTGTCGGCGGCGCCGGTGTATGGGCAGCCGGCGACCTTTGATCTGCAGGCCCATCGCGGCGGCCGCGG
CGAGACGACGGAGGAGTCGCTGCGCGCCTTCGCCAAGGCGATCCAAACCGGCGTCAGCACACTGGAACTCGACATCGTCG
TGACCCGCGACGGCCAACCGCTGGTGTGGCACGACCCGACGATCCAGGCCGACAAATGCAGCGACACCGGCCCGGCGTTC
CCCGGCGACCCGGGCTACCCGTATGTCGGCAAGCTGGTGCACCAGCTCACCGTCGCGCAGATCCACACCCTGGACGGCGG
GCACCGGCTGAAAGAGTTCCCGGACGCGGAAGTGGTGCGCGGCAACAAGATCGCGACCCTTCCTGAGGTCTTCGCGGTGG
CCGACTCGCACCGCGCCGACGCGATCCGCTACAACATCGAAACCAAGGTGGAGCCCGACGACACCGGCGCGTCGGCGCAG
CCCCAGGAGTTCGTCGACGTGATCCTGGCCGCGGTCAGGTCGGCGGACAAGCTCGCGCGGGTGGAGATCCAGAGCTTCGA
CTGGCGCACCCTGCCGCTGGTACGGCGGGCCGAGCCGTCCATCCCGCTGGTGGCCCTGTACGACGAGCGGGCCGCCGGTG
ACCCGGTGCTCGGGGCGCGGGCGGCCGGTGCCGACATCGTCTCCCCGGACTACCGGCTGGTCACCGGCAAACCGTACGTC
GACCGCGCGCATGCGTTGGGGCTCAAGGTCATTCCGTGGACCGTCGATGACGCCGAGGACATGCGGCGCCAGATCGACTA
CGGCGTCGACGGGCTCATCACCGACTTCCCGACGTTGGCGCGCGGGGTGCTGGCCGAACTCGGCGTGCCGCTGCCGCCGG
CCGTGCCGGGGTGA

Upstream 100 bases:

>100_bases
ACGCCTCGGTGGCCGCGGGGGTGGTGCTGGCCGAGATCTCCCGGCAGCGCAGGGGTTGAGTTCCCTGGGCTCGCGGTGGG
CGGCGGCGGTGGCGCTGCTG

Downstream 100 bases:

>100_bases
TCGGCGCCGCGGGCGCGCGCGGCGCGCCACATGATGCTCGGCCGCAACAGCCGGGTCGCGGGGTCGACGAGCGAGGTGAC
CCTGATGAACTGGTTCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MAVLLSAAPVYGQPATFDLQAHRGGRGETTEESLRAFAKAIQTGVSTLELDIVVTRDGQPLVWHDPTIQADKCSDTGPAF
PGDPGYPYVGKLVHQLTVAQIHTLDGGHRLKEFPDAEVVRGNKIATLPEVFAVADSHRADAIRYNIETKVEPDDTGASAQ
PQEFVDVILAAVRSADKLARVEIQSFDWRTLPLVRRAEPSIPLVALYDERAAGDPVLGARAAGADIVSPDYRLVTGKPYV
DRAHALGLKVIPWTVDDAEDMRRQIDYGVDGLITDFPTLARGVLAELGVPLPPAVPG

Sequences:

>Translated_297_residues
MAVLLSAAPVYGQPATFDLQAHRGGRGETTEESLRAFAKAIQTGVSTLELDIVVTRDGQPLVWHDPTIQADKCSDTGPAF
PGDPGYPYVGKLVHQLTVAQIHTLDGGHRLKEFPDAEVVRGNKIATLPEVFAVADSHRADAIRYNIETKVEPDDTGASAQ
PQEFVDVILAAVRSADKLARVEIQSFDWRTLPLVRRAEPSIPLVALYDERAAGDPVLGARAAGADIVSPDYRLVTGKPYV
DRAHALGLKVIPWTVDDAEDMRRQIDYGVDGLITDFPTLARGVLAELGVPLPPAVPG
>Mature_296_residues
AVLLSAAPVYGQPATFDLQAHRGGRGETTEESLRAFAKAIQTGVSTLELDIVVTRDGQPLVWHDPTIQADKCSDTGPAFP
GDPGYPYVGKLVHQLTVAQIHTLDGGHRLKEFPDAEVVRGNKIATLPEVFAVADSHRADAIRYNIETKVEPDDTGASAQP
QEFVDVILAAVRSADKLARVEIQSFDWRTLPLVRRAEPSIPLVALYDERAAGDPVLGARAAGADIVSPDYRLVTGKPYVD
RAHALGLKVIPWTVDDAEDMRRQIDYGVDGLITDFPTLARGVLAELGVPLPPAVPG

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 31978; Mature: 31847

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50007 PIPLC_X_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLLSAAPVYGQPATFDLQAHRGGRGETTEESLRAFAKAIQTGVSTLELDIVVTRDGQP
CEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCE
LVWHDPTIQADKCSDTGPAFPGDPGYPYVGKLVHQLTVAQIHTLDGGHRLKEFPDAEVVR
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHCCCCCEEC
GNKIATLPEVFAVADSHRADAIRYNIETKVEPDDTGASAQPQEFVDVILAAVRSADKLAR
CCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHE
VEIQSFDWRTLPLVRRAEPSIPLVALYDERAAGDPVLGARAAGADIVSPDYRLVTGKPYV
EEEECCCCEECCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCH
DRAHALGLKVIPWTVDDAEDMRRQIDYGVDGLITDFPTLARGVLAELGVPLPPAVPG
HHHHHCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AVLLSAAPVYGQPATFDLQAHRGGRGETTEESLRAFAKAIQTGVSTLELDIVVTRDGQP
EEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCE
LVWHDPTIQADKCSDTGPAFPGDPGYPYVGKLVHQLTVAQIHTLDGGHRLKEFPDAEVVR
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHCCCCCEEC
GNKIATLPEVFAVADSHRADAIRYNIETKVEPDDTGASAQPQEFVDVILAAVRSADKLAR
CCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHE
VEIQSFDWRTLPLVRRAEPSIPLVALYDERAAGDPVLGARAAGADIVSPDYRLVTGKPYV
EEEECCCCEECCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCH
DRAHALGLKVIPWTVDDAEDMRRQIDYGVDGLITDFPTLARGVLAELGVPLPPAVPG
HHHHHCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]