| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406506
Identifier: 41406506
GI number: 41406506
Start: 431719
End: 432261
Strand: Direct
Name: 41406506
Synonym: MAP0408
Alternate gene names: NA
Gene position: 431719-432261 (Clockwise)
Preceding gene: 41406504
Following gene: 41406507
Centisome position: 8.94
GC content: 75.32
Gene sequence:
>543_bases GTGCCGGGTCACTCGCGGGGCCTTCGCCGATCAGTCGCCAGCTTTGCCGCGCTGGCAACGAGTTACGCCGCCGCCACCGC GGCGGGGTGGCCCGCCGCGGCCCTGCCGGCCGACACCACGGACACGCCGACGCCGTGCTGGTCGGATCAGATCGCGGTGA CGGCCGCACCGGCGCAGGGCGCGGTCGGCCACCGCGCGGTGACGCTGGTGTTCACCCTCGCCGGCGGCGCCGAACCGTGC ACGCTGACCGGATACGCCGCGGTGGACTCGGGCGCCGGCGGCGCGCTCGTCCACGCGCAGCCCACCCCGCGCGGATACCT GGGCGGGCTGCCGGCGGGCGTCGATGCGCCGCCCACCGTCATCCTGTCGATCTCCACGCAGGGCCAGGCGATCGTCGAGG GCGTCGCCGTCGACGCCGACGGGCAGCCGTGCCCCACCTACACCGATCTGCTCGTCAACCCGCCCGACACCACCGCGGTG GTGACGGTGCCGGCCACCATCGAGGCCTGCGAGCTGCAGGTGCATCCGATCACCGCGGTCTGA
Upstream 100 bases:
>100_bases GGTCGAGGCGTCAACCGTCAGAGAGCCTAGCCTCACATGGTGAAAAGCAAAGCCTTCGAATCGACGTCGAAGGGCGCCGG CGTGCCGGATAATCACCGCT
Downstream 100 bases:
>100_bases ACGACGTCCGTCGCCTCTGGTCGGGCAGTAGACCCGCGCGGGCACTTCACCGCCGCGCCGCTTCACGCCCTAGGGTCGGG TGTCATGCGTGGGATGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPGHSRGLRRSVASFAALATSYAAATAAGWPAAALPADTTDTPTPCWSDQIAVTAAPAQGAVGHRAVTLVFTLAGGAEPC TLTGYAAVDSGAGGALVHAQPTPRGYLGGLPAGVDAPPTVILSISTQGQAIVEGVAVDADGQPCPTYTDLLVNPPDTTAV VTVPATIEACELQVHPITAV
Sequences:
>Translated_180_residues MPGHSRGLRRSVASFAALATSYAAATAAGWPAAALPADTTDTPTPCWSDQIAVTAAPAQGAVGHRAVTLVFTLAGGAEPC TLTGYAAVDSGAGGALVHAQPTPRGYLGGLPAGVDAPPTVILSISTQGQAIVEGVAVDADGQPCPTYTDLLVNPPDTTAV VTVPATIEACELQVHPITAV >Mature_179_residues PGHSRGLRRSVASFAALATSYAAATAAGWPAAALPADTTDTPTPCWSDQIAVTAAPAQGAVGHRAVTLVFTLAGGAEPCT LTGYAAVDSGAGGALVHAQPTPRGYLGGLPAGVDAPPTVILSISTQGQAIVEGVAVDADGQPCPTYTDLLVNPPDTTAVV TVPATIEACELQVHPITAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17791; Mature: 17660
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGHSRGLRRSVASFAALATSYAAATAAGWPAAALPADTTDTPTPCWSDQIAVTAAPAQG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC AVGHRAVTLVFTLAGGAEPCTLTGYAAVDSGAGGALVHAQPTPRGYLGGLPAGVDAPPTV CCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEE ILSISTQGQAIVEGVAVDADGQPCPTYTDLLVNPPDTTAVVTVPATIEACELQVHPITAV EEEECCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEEECCEEEEEEEEEEEEECC >Mature Secondary Structure PGHSRGLRRSVASFAALATSYAAATAAGWPAAALPADTTDTPTPCWSDQIAVTAAPAQG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC AVGHRAVTLVFTLAGGAEPCTLTGYAAVDSGAGGALVHAQPTPRGYLGGLPAGVDAPPTV CCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEE ILSISTQGQAIVEGVAVDADGQPCPTYTDLLVNPPDTTAVVTVPATIEACELQVHPITAV EEEECCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEEECCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA