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The map label for this gene is nudL [H]

Identifier: 41406500

GI number: 41406500

Start: 425147

End: 425965

Strand: Direct

Name: nudL [H]

Synonym: MAP0402

Alternate gene names: 41406500

Gene position: 425147-425965 (Clockwise)

Preceding gene: 41406499

Following gene: 41406501

Centisome position: 8.8

GC content: 73.87

Gene sequence:

>819_bases
GTGAGTGCTGGGGGTTCGCCCCTGCGGAATGGGGACCCCGCCCCGGCGCGTGGGACCGTTCCGCTGACGCCTGACGCCTG
CCCGTCCTGGCTGCGTCCGCTGGTCGACAACGTCGACCACGTCCCCGACGCGGCCCGGCGCCGGTTGCCGGCCGACGTGC
TGGCGATGATCACCACCAAGGCCGCGTCGGCGCTGACGAGCGTGCGCGGCGCCGCGCGGGAAGCCGCGGTGCTGGTGCTG
TTCTCCGGCCCGGAATCCGGGCCGCCCGGCGGGGGCCCGCCCACCGACGCCGACCTGCTGGTCACCGTGCGGGCGTCCAC
GCTGCGCCACCACGCCGGGCAGGCGGCGTTTCCCGGCGGCGCCGCCGATCCCACCGACGACGGCCCGGTGGCCACCGCCC
TGCGTGAGGCCCGCGAGGAGACCGGGATCGACGTCAGCCGGCTGCATCCGCTGGCCACGATGGAGAAGATGTTCATCGCG
CCCTCGCAGTTCCACGTCGTGCCCGTGCTGGCGTATTCGCCCGACCCCGGGCCGGTGGCCGTGGTCAACGAGGCCGAGAC
CGCGCTGGTGGCGCGAGTTCCGTTGCGCGCCTTCATCAATCCCGCCAACCGGCTGATGGTGTACCGCGGCGACTTGGGCC
GCCGGTGGGCCGGGCCGGCGTTTCTGCTCAACGAGATGCTGGTGTGGGGCTTCACCGGCCAGGTGATCTCCGCGCTGCTC
GACGTCGCGGGCTGGGCCCAGCCCTGGGACACCTCCGATCAGCGGGAGTTGGACGCGGCGATGGCGCTGGTCGGCGAGCG
GGGTGACGCACTCGAATGA

Upstream 100 bases:

>100_bases
CCCAGACGCTGCCGCGTGCTTTCAGCACGGCCGACGAGATCGCGGCCGCGATCGGGAACGACAGGGGATAAGCGGAAAAA
TTGAACCGACTGGAGGGGCC

Downstream 100 bases:

>100_bases
ACCTGAATTCGATGACCCCGTCGCAGTGGCTGGACGTCGCGGTGCTGGCGGTGGCCTTCATCGCGGCGATCTCGGGCTGG
CGGTCCGGCGCGTTGGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSAGGSPLRNGDPAPARGTVPLTPDACPSWLRPLVDNVDHVPDAARRRLPADVLAMITTKAASALTSVRGAAREAAVLVL
FSGPESGPPGGGPPTDADLLVTVRASTLRHHAGQAAFPGGAADPTDDGPVATALREAREETGIDVSRLHPLATMEKMFIA
PSQFHVVPVLAYSPDPGPVAVVNEAETALVARVPLRAFINPANRLMVYRGDLGRRWAGPAFLLNEMLVWGFTGQVISALL
DVAGWAQPWDTSDQRELDAAMALVGERGDALE

Sequences:

>Translated_272_residues
MSAGGSPLRNGDPAPARGTVPLTPDACPSWLRPLVDNVDHVPDAARRRLPADVLAMITTKAASALTSVRGAAREAAVLVL
FSGPESGPPGGGPPTDADLLVTVRASTLRHHAGQAAFPGGAADPTDDGPVATALREAREETGIDVSRLHPLATMEKMFIA
PSQFHVVPVLAYSPDPGPVAVVNEAETALVARVPLRAFINPANRLMVYRGDLGRRWAGPAFLLNEMLVWGFTGQVISALL
DVAGWAQPWDTSDQRELDAAMALVGERGDALE
>Mature_271_residues
SAGGSPLRNGDPAPARGTVPLTPDACPSWLRPLVDNVDHVPDAARRRLPADVLAMITTKAASALTSVRGAAREAAVLVLF
SGPESGPPGGGPPTDADLLVTVRASTLRHHAGQAAFPGGAADPTDDGPVATALREAREETGIDVSRLHPLATMEKMFIAP
SQFHVVPVLAYSPDPGPVAVVNEAETALVARVPLRAFINPANRLMVYRGDLGRRWAGPAFLLNEMLVWGFTGQVISALLD
VAGWAQPWDTSDQRELDAAMALVGERGDALE

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Drosophila melanogaster, GI18859683, Length=182, Percent_Identity=30.2197802197802, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 28520; Mature: 28388

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGGSPLRNGDPAPARGTVPLTPDACPSWLRPLVDNVDHVPDAARRRLPADVLAMITTK
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHCCCHHHHHCCCHHHHHHHHHH
AASALTSVRGAAREAAVLVLFSGPESGPPGGGPPTDADLLVTVRASTLRHHAGQAAFPGG
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCC
AADPTDDGPVATALREAREETGIDVSRLHPLATMEKMFIAPSQFHVVPVLAYSPDPGPVA
CCCCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEE
VVNEAETALVARVPLRAFINPANRLMVYRGDLGRRWAGPAFLLNEMLVWGFTGQVISALL
EECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
DVAGWAQPWDTSDQRELDAAMALVGERGDALE
HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SAGGSPLRNGDPAPARGTVPLTPDACPSWLRPLVDNVDHVPDAARRRLPADVLAMITTK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHCCCHHHHHCCCHHHHHHHHHH
AASALTSVRGAAREAAVLVLFSGPESGPPGGGPPTDADLLVTVRASTLRHHAGQAAFPGG
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCC
AADPTDDGPVATALREAREETGIDVSRLHPLATMEKMFIAPSQFHVVPVLAYSPDPGPVA
CCCCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEE
VVNEAETALVARVPLRAFINPANRLMVYRGDLGRRWAGPAFLLNEMLVWGFTGQVISALL
EECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
DVAGWAQPWDTSDQRELDAAMALVGERGDALE
HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]