| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is gloB [H]
Identifier: 41406495
GI number: 41406495
Start: 421403
End: 422206
Strand: Direct
Name: gloB [H]
Synonym: MAP0397
Alternate gene names: 41406495
Gene position: 421403-422206 (Clockwise)
Preceding gene: 41406494
Following gene: 41406498
Centisome position: 8.73
GC content: 70.9
Gene sequence:
>804_bases GTGACCGAAGTTGCCGCGTCGCCGACCCATCCCGCATACGGCAGGTTGCGGGCGGTCACCGACACGGCCTCGGTGCTGCT GGCCGACAATCCCGGTTTGCTGACGCTGGAGGGCACCAACACCTGGGTGCTGCGCGGGCGGGGCAGCGACGAGCTGGTGA TCGTGGACCCCGGGCCGGACGACGACGAGCATATCGCGCGGATCGCCGCGCTGGGCCGCATCGCGCTGGTGCTGATCAGC CACCGGCACGGCGACCACACCGACGGCATCGACAAGCTGGTCGGGCGCACCGGTGCCATCGTGCGCTCGGCGGGCAGCGG CTTTCTGCGCGGCCTGGGCGGTGAGCTCACCGACGGCGAGGTGATCGACGCGGCCGGGCTGAGGATCAAGGTGATGGCCA CGCCCGGGCACACCGCCGATTCGCTGTGCTTCCTGCTCGACGACGCCGTGCTGACCGCCGACACCGTGCTGGGCCGCGGC ACCACCGTCCTCGACAAGGAGGACGGCAGCCTGACGGACTACCTGGAATCGCTGCGGCGGCTGCGCGGCCTGGGCCGGCG GGCGGTGCTGCCCGGCCACGGCCCGGACCTGACCGACCTGGAAAGCGTCGCGCAGGGCTACCTGGAACACCGGCGGGAGC GGCTGGACCAGGTGCGATCGGCGGTGCGGGAGCTGGGCGAGGACGTCAGTGCCCGCCGGATCGTCGAACACGTCTACGTC GATGTCGATGAGAAGCTGTGGGACGCCGCCGAGTGGTCGGTGCAGGTGCAGTTGAATCACCTGCGCTCGGAGCCATCGAC GTAA
Upstream 100 bases:
>100_bases GCGAACATGGCGCGCATGCGCGCTCGGCGGTCGGGGTCGGTGAGCTGCCGCTGGATGCGCCGGTGGAAGTGGAGCTGATC GTGGAGGTCGGCGCGCGGCC
Downstream 100 bases:
>100_bases CCGCCTTGGCGTGAGTCACTCCGGCCCCATGGGTCCCGGCCCCGAAGGGACGGAGTGCGTCAGAGTTCCGCTAGCGCCGC CGCTAGCGGATTTCGAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTEVAASPTHPAYGRLRAVTDTASVLLADNPGLLTLEGTNTWVLRGRGSDELVIVDPGPDDDEHIARIAALGRIALVLIS HRHGDHTDGIDKLVGRTGAIVRSAGSGFLRGLGGELTDGEVIDAAGLRIKVMATPGHTADSLCFLLDDAVLTADTVLGRG TTVLDKEDGSLTDYLESLRRLRGLGRRAVLPGHGPDLTDLESVAQGYLEHRRERLDQVRSAVRELGEDVSARRIVEHVYV DVDEKLWDAAEWSVQVQLNHLRSEPST
Sequences:
>Translated_267_residues MTEVAASPTHPAYGRLRAVTDTASVLLADNPGLLTLEGTNTWVLRGRGSDELVIVDPGPDDDEHIARIAALGRIALVLIS HRHGDHTDGIDKLVGRTGAIVRSAGSGFLRGLGGELTDGEVIDAAGLRIKVMATPGHTADSLCFLLDDAVLTADTVLGRG TTVLDKEDGSLTDYLESLRRLRGLGRRAVLPGHGPDLTDLESVAQGYLEHRRERLDQVRSAVRELGEDVSARRIVEHVYV DVDEKLWDAAEWSVQVQLNHLRSEPST >Mature_266_residues TEVAASPTHPAYGRLRAVTDTASVLLADNPGLLTLEGTNTWVLRGRGSDELVIVDPGPDDDEHIARIAALGRIALVLISH RHGDHTDGIDKLVGRTGAIVRSAGSGFLRGLGGELTDGEVIDAAGLRIKVMATPGHTADSLCFLLDDAVLTADTVLGRGT TVLDKEDGSLTDYLESLRRLRGLGRRAVLPGHGPDLTDLESVAQGYLEHRRERLDQVRSAVRELGEDVSARRIVEHVYVD VDEKLWDAAEWSVQVQLNHLRSEPST
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI7705793, Length=256, Percent_Identity=30.078125, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI193205216, Length=263, Percent_Identity=28.8973384030418, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17537503, Length=263, Percent_Identity=28.8973384030418, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI20129357, Length=275, Percent_Identity=28.3636363636364, Blast_Score=107, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28809; Mature: 28678
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVAASPTHPAYGRLRAVTDTASVLLADNPGLLTLEGTNTWVLRGRGSDELVIVDPGPD CCCCCCCCCCCCHHHEEEEECCEEEEEECCCCEEEEECCCEEEEEECCCCCEEEECCCCC DDEHIARIAALGRIALVLISHRHGDHTDGIDKLVGRTGAIVRSAGSGFLRGLGGELTDGE CHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHCCCCHHHHHCCCHHHHHCCCCCCCCC VIDAAGLRIKVMATPGHTADSLCFLLDDAVLTADTVLGRGTTVLDKEDGSLTDYLESLRR EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH LRGLGRRAVLPGHGPDLTDLESVAQGYLEHRRERLDQVRSAVRELGEDVSARRIVEHVYV HHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DVDEKLWDAAEWSVQVQLNHLRSEPST CCCHHHHCCCCEEEEEEEEHHCCCCCC >Mature Secondary Structure TEVAASPTHPAYGRLRAVTDTASVLLADNPGLLTLEGTNTWVLRGRGSDELVIVDPGPD CCCCCCCCCCCHHHEEEEECCEEEEEECCCCEEEEECCCEEEEEECCCCCEEEECCCCC DDEHIARIAALGRIALVLISHRHGDHTDGIDKLVGRTGAIVRSAGSGFLRGLGGELTDGE CHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHCCCCHHHHHCCCHHHHHCCCCCCCCC VIDAAGLRIKVMATPGHTADSLCFLLDDAVLTADTVLGRGTTVLDKEDGSLTDYLESLRR EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH LRGLGRRAVLPGHGPDLTDLESVAQGYLEHRRERLDQVRSAVRELGEDVSARRIVEHVYV HHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DVDEKLWDAAEWSVQVQLNHLRSEPST CCCHHHHCCCCEEEEEEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA