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The map label for this gene is selD

Identifier: 41406464

GI number: 41406464

Start: 391289

End: 392206

Strand: Direct

Name: selD

Synonym: MAP0366

Alternate gene names: 41406464

Gene position: 391289-392206 (Clockwise)

Preceding gene: 41406461

Following gene: 41406465

Centisome position: 8.1

GC content: 74.29

Gene sequence:

>918_bases
GTGGTGCGCGGGCTGGGCGCGGCCAGTCCGCGCGACCCGCTGGGGGAGCTGCTGGTGGGCCTCGACAGCGGTGACGACGC
GGCGGTGGTGCGCATCCGGCAGGGCACCGCGCTGATCGCGACGACGGACTTCTTCACCCCGGTGGTGGACGACGCCTACG
ACTGGGGCCGGATCGCGGCCACCAACGCGCTGTCCGACGTGTACGCGATGGGCGGGCGCCCGGTGGTCGCGGTGAACCTG
CTGGGCTGGCCGCGCGAGGTGCTGCCGTTCGAGTTGGCCGCCGAGACGCTGCGCGGCGGGCTGGACGTGTGCGGCCTGGC
CGGCTGCCATTTGGCCGGCGGGCACAGCGTCGATGACCCGGAACCCAAGTACGGGCTGGCGGTGACCGGGATCGCGGACC
CGAATCGATTGCTGCGCAACGACTCCGGCAAGCCGGGCCTGCCGCTGTCGCTGACCAAGCCGCTCGGCATCGGCGTGCTC
AACAACCGGCACAAGGCGACCGGGGAGCGGTTCGAGGAGGCCATCGCCGTGATGACCACGCTCAACGCCGAGGCGGCCGG
CGCGGCGCTGGCCGCCGGCGTCGAGTGCGCCACCGACGTCACCGGTTTCGGGTTGCTCGGCCACCTGCACAAGCTGGCCC
GGGCCAGCGGGGTGACGGCGGTGCTCGACGCGGCGGCGGTGCCGTACCTGGACGGCGCCCGCGAGGCGCTGGCGGCCGGC
TACCTGTCCGGGGGCACCCGGCGCAACCTCGACTGGGTGGCCCCGCACGTCGACCTGTCGGGTGTCGGCGAGGACGAGGC
GCTGTTGCTGGCCGACGCGCAGACCTCCGGCGGGCTGCTGATCGCCGGCGAGATCCCGGGGGCGCCCGTCATCGGTGAGC
TGGTGCCGCGCGGCGAGCACACCATCGTGGTGCGCTGA

Upstream 100 bases:

>100_bases
GGACCATGGGGTCAATTATGGACGGGTGACCTACCGACTGACGCAATACGCTCACGGCGGCGGCTGCGCCTGCAAGATCC
CGCCCGGTGAGCTCGAGGAC

Downstream 100 bases:

>100_bases
GCGGGCCGATAACAGATGGCGACCCGCTGCGCCCGGCTTCGCCGCGCTTGCGATCGCCATTAGGGTGAGGGGATGGCCCC
GAAAAAAGCCCTGAGCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MVRGLGAASPRDPLGELLVGLDSGDDAAVVRIRQGTALIATTDFFTPVVDDAYDWGRIAATNALSDVYAMGGRPVVAVNL
LGWPREVLPFELAAETLRGGLDVCGLAGCHLAGGHSVDDPEPKYGLAVTGIADPNRLLRNDSGKPGLPLSLTKPLGIGVL
NNRHKATGERFEEAIAVMTTLNAEAAGAALAAGVECATDVTGFGLLGHLHKLARASGVTAVLDAAAVPYLDGAREALAAG
YLSGGTRRNLDWVAPHVDLSGVGEDEALLLADAQTSGGLLIAGEIPGAPVIGELVPRGEHTIVVR

Sequences:

>Translated_305_residues
MVRGLGAASPRDPLGELLVGLDSGDDAAVVRIRQGTALIATTDFFTPVVDDAYDWGRIAATNALSDVYAMGGRPVVAVNL
LGWPREVLPFELAAETLRGGLDVCGLAGCHLAGGHSVDDPEPKYGLAVTGIADPNRLLRNDSGKPGLPLSLTKPLGIGVL
NNRHKATGERFEEAIAVMTTLNAEAAGAALAAGVECATDVTGFGLLGHLHKLARASGVTAVLDAAAVPYLDGAREALAAG
YLSGGTRRNLDWVAPHVDLSGVGEDEALLLADAQTSGGLLIAGEIPGAPVIGELVPRGEHTIVVR
>Mature_305_residues
MVRGLGAASPRDPLGELLVGLDSGDDAAVVRIRQGTALIATTDFFTPVVDDAYDWGRIAATNALSDVYAMGGRPVVAVNL
LGWPREVLPFELAAETLRGGLDVCGLAGCHLAGGHSVDDPEPKYGLAVTGIADPNRLLRNDSGKPGLPLSLTKPLGIGVL
NNRHKATGERFEEAIAVMTTLNAEAAGAALAAGVECATDVTGFGLLGHLHKLARASGVTAVLDAAAVPYLDGAREALAAG
YLSGGTRRNLDWVAPHVDLSGVGEDEALLLADAQTSGGLLIAGEIPGAPVIGELVPRGEHTIVVR

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=257, Percent_Identity=32.6848249027237, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI15011844, Length=214, Percent_Identity=35.5140186915888, Blast_Score=103, Evalue=2e-22,
Organism=Escherichia coli, GI1788062, Length=275, Percent_Identity=49.0909090909091, Blast_Score=235, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17543426, Length=332, Percent_Identity=30.1204819277108, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24653602, Length=261, Percent_Identity=32.5670498084291, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24653604, Length=261, Percent_Identity=32.5670498084291, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI28574119, Length=239, Percent_Identity=30.5439330543933, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28574118, Length=221, Percent_Identity=32.579185520362, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 31221; Mature: 31221

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGLGAASPRDPLGELLVGLDSGDDAAVVRIRQGTALIATTDFFTPVVDDAYDWGRIAA
CCCCCCCCCCCCCHHHHEEECCCCCCEEEEEEECCCEEEEECCCCCHHHCCCCCCCHHHH
TNALSDVYAMGGRPVVAVNLLGWPREVLPFELAAETLRGGLDVCGLAGCHLAGGHSVDDP
HHHHHHHHHCCCCCEEEEEECCCCHHHCCHHHHHHHHHCCCCCHHHCCCEECCCCCCCCC
EPKYGLAVTGIADPNRLLRNDSGKPGLPLSLTKPLGIGVLNNRHKATGERFEEAIAVMTT
CCCCCEEEECCCCCHHHHHCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHH
LNAEAAGAALAAGVECATDVTGFGLLGHLHKLARASGVTAVLDAAAVPYLDGAREALAAG
CCCHHHCHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHH
YLSGGTRRNLDWVAPHVDLSGVGEDEALLLADAQTSGGLLIAGEIPGAPVIGELVPRGEH
HHCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHCCCCCE
TIVVR
EEEEC
>Mature Secondary Structure
MVRGLGAASPRDPLGELLVGLDSGDDAAVVRIRQGTALIATTDFFTPVVDDAYDWGRIAA
CCCCCCCCCCCCCHHHHEEECCCCCCEEEEEEECCCEEEEECCCCCHHHCCCCCCCHHHH
TNALSDVYAMGGRPVVAVNLLGWPREVLPFELAAETLRGGLDVCGLAGCHLAGGHSVDDP
HHHHHHHHHCCCCCEEEEEECCCCHHHCCHHHHHHHHHCCCCCHHHCCCEECCCCCCCCC
EPKYGLAVTGIADPNRLLRNDSGKPGLPLSLTKPLGIGVLNNRHKATGERFEEAIAVMTT
CCCCCEEEECCCCCHHHHHCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHH
LNAEAAGAALAAGVECATDVTGFGLLGHLHKLARASGVTAVLDAAAVPYLDGAREALAAG
CCCHHHCHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHH
YLSGGTRRNLDWVAPHVDLSGVGEDEALLLADAQTSGGLLIAGEIPGAPVIGELVPRGEH
HHCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHCCCCCE
TIVVR
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA