| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406441
Identifier: 41406441
GI number: 41406441
Start: 368087
End: 368455
Strand: Direct
Name: 41406441
Synonym: MAP0343
Alternate gene names: NA
Gene position: 368087-368455 (Clockwise)
Preceding gene: 41406439
Following gene: 41406447
Centisome position: 7.62
GC content: 65.85
Gene sequence:
>369_bases ATGTCTGTGACAGCCTTCCAGGACTTGCCGTTGGCCGATCGCGACCGCGAGTGGGACGGCGATGCCGCCGAGAAGCGCGT CCGCAAATGGGCGGGCGCGCAAGACGAGCCGAACGAGAAGTACCGCGACGCCCACGTCTGGTACGACGCCGACAAGAAGG ACAATTTCACGGCGTACAAGCTGTTGATCGCCGACGTGATCGGCGGCGAGCTCAAGGCCGTGCCCCGCGGGGTGATGGCG GCCGGCGCGATCATGGACGGCGCGCGCGGCGGCATCGACGTGCCCAAGTCCGACATCGATCGGATCAAGAGCCACCTGGC CAAGTACTACCAGAAGATGGGCGAGAGCCCGCCCTGGGAACGAAGCTAG
Upstream 100 bases:
>100_bases TGGGTGGTGTTCATGACGCCAGCACAACGCTACGCCGCGGCTACCGATCCCAACTCGAAATGGGTGTTTAGCCCCTCGCC GCAGCGGGCACGCGAACCGC
Downstream 100 bases:
>100_bases CACCCCGAGGCATCGCCGGCAGAGGGCGATTCCGTTCGCCGAACGTGGGGGACATGGATGAAACCGCGGCCCGAATCGTG CATACCCCCCACGCTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSVTAFQDLPLADRDREWDGDAAEKRVRKWAGAQDEPNEKYRDAHVWYDADKKDNFTAYKLLIADVIGGELKAVPRGVMA AGAIMDGARGGIDVPKSDIDRIKSHLAKYYQKMGESPPWERS
Sequences:
>Translated_122_residues MSVTAFQDLPLADRDREWDGDAAEKRVRKWAGAQDEPNEKYRDAHVWYDADKKDNFTAYKLLIADVIGGELKAVPRGVMA AGAIMDGARGGIDVPKSDIDRIKSHLAKYYQKMGESPPWERS >Mature_121_residues SVTAFQDLPLADRDREWDGDAAEKRVRKWAGAQDEPNEKYRDAHVWYDADKKDNFTAYKLLIADVIGGELKAVPRGVMAA GAIMDGARGGIDVPKSDIDRIKSHLAKYYQKMGESPPWERS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13710; Mature: 13579
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTAFQDLPLADRDREWDGDAAEKRVRKWAGAQDEPNEKYRDAHVWYDADKKDNFTAYK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCEEECCCCCCCHHHHH LLIADVIGGELKAVPRGVMAAGAIMDGARGGIDVPKSDIDRIKSHLAKYYQKMGESPPWE HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC RS CC >Mature Secondary Structure SVTAFQDLPLADRDREWDGDAAEKRVRKWAGAQDEPNEKYRDAHVWYDADKKDNFTAYK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCEEECCCCCCCHHHHH LLIADVIGGELKAVPRGVMAAGAIMDGARGGIDVPKSDIDRIKSHLAKYYQKMGESPPWE HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC RS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA