| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406426
Identifier: 41406426
GI number: 41406426
Start: 351277
End: 352665
Strand: Direct
Name: 41406426
Synonym: MAP0328
Alternate gene names: NA
Gene position: 351277-352665 (Clockwise)
Preceding gene: 41406425
Following gene: 41406428
Centisome position: 7.27
GC content: 73.87
Gene sequence:
>1389_bases GTGGCCGTGACCGAATCCGGCCGGCTGACACTGGTACTGCGCTACGCCGACCTCGGCATCGCCACCTACGCCAGCCTGCG GATCGTCGGGCAGCCCGAGCGGACCGTCGCCTGGGTGGTGGAGGAACCGCTGCTGCTGGCCGCCCTGCAGGAGCTCGCCG CCGCGTTGCCCGAGCCGCACGACGCCGAGAATCGGCGTGCCGCCATCGGCCGCGCGCTGAGCACGGGGGCCTTCGCCGCA CCGGACACCGAACTCACGCTCGCCTACATCCTGGGCGTGCTGCTGATCGGCAGCGCGGGCTGGCAGCTGTTGACCGAATG TGTGTCGTCGCCGCGAGCGGTGCTGTTCGTCTCGCCCAGCGCGCGGCTGGCCCGGGTGCCCTGGGGGCTGCTGGCGATCC CGAAATCGGGGCCCAGCAAGGAGGAGCTGGTGCGCGCCCGCCAGGACGCGATCACCGCCGCCGGGCGCGCCGCGGCCCAA ATCCCTTGGCGTCTGGGCGATTTGGCGGCGCTGACCGATGGGCATCGGCTGATGGAACTGGTCGAGGTGCTGATGGCGGT ACCCCCCAACATTGTGCACGCGCCGCGGACGGCCACCGAATGGGACGCCCGGCGCGACGGGCCGCCGTTGCTGGTGCTCG ACCCGCGGGTGCCCGGGCAGCGGCCGGACTCCGCGCTCGGGTCGGTGCTGGGCAGGCCGTCGCCGGGCACGCCGGTCGGC CGGCACTTCGCCGAGCTGATGCGGCGGCGACCCGTGCTGCCGCGGGTCGACGCGGTGGTCGACTTGTTCCGCCGGCGCGA CGCCGACCGCCGCTGGCTGGCCGGGCTGCTGGCCCGATCCCCGTGCCGGCTGCTCTATGTCGGGCACGCCAGTTCGGCGG ACGACGATCACCGGCACGGCGGCCGCGCCGATCGGGCGGCCCTGCATCTGGCCGACCCGGCGGCGGTGCCCGGCGACGCC AACGCCATCGGCGATCACCGGCCGCTGACCGCCTCGGATTTGATGGCGCTGCGGTTGCCGATGCCGCCGCGGGTGGCGCT GCTGGCCTGCGGGTCGGGCGGCGACTATCAGTTCGACGAGGCGACCGGTCTGGTGGCGGCGATGATCCTGAACGGGGCGC AGCTGGTGACCGCGACGCTGTGGTCGCTGCCGACGACCGCCGCCTACCGGCAATTCGCGATGCCGGCCCGCGAATCCCCC GAATCCGTCGACCCGATGGCCGATCTGGTGTCCGCCGTCGACACCGCGCACGACGCTCCCGCCGACGCCGGGTGCGCGCT GAACCGGTGGCAGCGCGCCCAGATGCGACGCTGGCGCGACGGGGATCGTGTTGCCAGCCCGCTGTATTGGGCCGCACTGG CCACCTTCACCGTCGATGGTGCGCGCTAG
Upstream 100 bases:
>100_bases GGATGCACCCGGGCGAGGCGCCGATCCTGGACCACTACCGCACGCTGGCCGTGCAACGCTACGGGCGCGCCGTCACCGCC GACGAGCCGGCCTGGTCGAC
Downstream 100 bases:
>100_bases TGCTACAGCGCCGCCACCCATGCCGCATGCACGGCCAGCACGTCGTCGGGGAGCGAAAGCTCCTCGCGGGCAGCGGGATC GAAGGCGACCAGCACAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MAVTESGRLTLVLRYADLGIATYASLRIVGQPERTVAWVVEEPLLLAALQELAAALPEPHDAENRRAAIGRALSTGAFAA PDTELTLAYILGVLLIGSAGWQLLTECVSSPRAVLFVSPSARLARVPWGLLAIPKSGPSKEELVRARQDAITAAGRAAAQ IPWRLGDLAALTDGHRLMELVEVLMAVPPNIVHAPRTATEWDARRDGPPLLVLDPRVPGQRPDSALGSVLGRPSPGTPVG RHFAELMRRRPVLPRVDAVVDLFRRRDADRRWLAGLLARSPCRLLYVGHASSADDDHRHGGRADRAALHLADPAAVPGDA NAIGDHRPLTASDLMALRLPMPPRVALLACGSGGDYQFDEATGLVAAMILNGAQLVTATLWSLPTTAAYRQFAMPARESP ESVDPMADLVSAVDTAHDAPADAGCALNRWQRAQMRRWRDGDRVASPLYWAALATFTVDGAR
Sequences:
>Translated_462_residues MAVTESGRLTLVLRYADLGIATYASLRIVGQPERTVAWVVEEPLLLAALQELAAALPEPHDAENRRAAIGRALSTGAFAA PDTELTLAYILGVLLIGSAGWQLLTECVSSPRAVLFVSPSARLARVPWGLLAIPKSGPSKEELVRARQDAITAAGRAAAQ IPWRLGDLAALTDGHRLMELVEVLMAVPPNIVHAPRTATEWDARRDGPPLLVLDPRVPGQRPDSALGSVLGRPSPGTPVG RHFAELMRRRPVLPRVDAVVDLFRRRDADRRWLAGLLARSPCRLLYVGHASSADDDHRHGGRADRAALHLADPAAVPGDA NAIGDHRPLTASDLMALRLPMPPRVALLACGSGGDYQFDEATGLVAAMILNGAQLVTATLWSLPTTAAYRQFAMPARESP ESVDPMADLVSAVDTAHDAPADAGCALNRWQRAQMRRWRDGDRVASPLYWAALATFTVDGAR >Mature_461_residues AVTESGRLTLVLRYADLGIATYASLRIVGQPERTVAWVVEEPLLLAALQELAAALPEPHDAENRRAAIGRALSTGAFAAP DTELTLAYILGVLLIGSAGWQLLTECVSSPRAVLFVSPSARLARVPWGLLAIPKSGPSKEELVRARQDAITAAGRAAAQI PWRLGDLAALTDGHRLMELVEVLMAVPPNIVHAPRTATEWDARRDGPPLLVLDPRVPGQRPDSALGSVLGRPSPGTPVGR HFAELMRRRPVLPRVDAVVDLFRRRDADRRWLAGLLARSPCRLLYVGHASSADDDHRHGGRADRAALHLADPAAVPGDAN AIGDHRPLTASDLMALRLPMPPRVALLACGSGGDYQFDEATGLVAAMILNGAQLVTATLWSLPTTAAYRQFAMPARESPE SVDPMADLVSAVDTAHDAPADAGCALNRWQRAQMRRWRDGDRVASPLYWAALATFTVDGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49541; Mature: 49410
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTESGRLTLVLRYADLGIATYASLRIVGQPERTVAWVVEEPLLLAALQELAAALPEPH CCCCCCCCEEEEEEECCCCHHHEEEEEEECCCCCEEEEHHHCHHHHHHHHHHHHHCCCCC DAENRRAAIGRALSTGAFAAPDTELTLAYILGVLLIGSAGWQLLTECVSSPRAVLFVSPS CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCC ARLARVPWGLLAIPKSGPSKEELVRARQDAITAAGRAAAQIPWRLGDLAALTDGHRLMEL CCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHCCCHHHHHH VEVLMAVPPNIVHAPRTATEWDARRDGPPLLVLDPRVPGQRPDSALGSVLGRPSPGTPVG HHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHH RHFAELMRRRPVLPRVDAVVDLFRRRDADRRWLAGLLARSPCRLLYVGHASSADDDHRHG HHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCC GRADRAALHLADPAAVPGDANAIGDHRPLTASDLMALRLPMPPRVALLACGSGGDYQFDE CCHHHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCEEEEEECCCCCCCCHH ATGLVAAMILNGAQLVTATLWSLPTTAAYRQFAMPARESPESVDPMADLVSAVDTAHDAP HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC ADAGCALNRWQRAQMRRWRDGDRVASPLYWAALATFTVDGAR CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AVTESGRLTLVLRYADLGIATYASLRIVGQPERTVAWVVEEPLLLAALQELAAALPEPH CCCCCCCEEEEEEECCCCHHHEEEEEEECCCCCEEEEHHHCHHHHHHHHHHHHHCCCCC DAENRRAAIGRALSTGAFAAPDTELTLAYILGVLLIGSAGWQLLTECVSSPRAVLFVSPS CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCC ARLARVPWGLLAIPKSGPSKEELVRARQDAITAAGRAAAQIPWRLGDLAALTDGHRLMEL CCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHCCCHHHHHH VEVLMAVPPNIVHAPRTATEWDARRDGPPLLVLDPRVPGQRPDSALGSVLGRPSPGTPVG HHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHH RHFAELMRRRPVLPRVDAVVDLFRRRDADRRWLAGLLARSPCRLLYVGHASSADDDHRHG HHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCC GRADRAALHLADPAAVPGDANAIGDHRPLTASDLMALRLPMPPRVALLACGSGGDYQFDE CCHHHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCEEEEEECCCCCCCCHH ATGLVAAMILNGAQLVTATLWSLPTTAAYRQFAMPARESPESVDPMADLVSAVDTAHDAP HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC ADAGCALNRWQRAQMRRWRDGDRVASPLYWAALATFTVDGAR CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA