| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406425
Identifier: 41406425
GI number: 41406425
Start: 349601
End: 351286
Strand: Direct
Name: 41406425
Synonym: MAP0327
Alternate gene names: NA
Gene position: 349601-351286 (Clockwise)
Preceding gene: 41406424
Following gene: 41406426
Centisome position: 7.24
GC content: 71.06
Gene sequence:
>1686_bases GTGTCGATCCCGGACGGGCTGCAGCGGGCCCGCCGCATGGCGTTAGCGGCCGACGAGGCCGGCGCCCGCGATCTGCTGCT GTCCCTGATACCGCGCATCGAACGGGACGACCGAGACGATCTCATGCTGGAAGTGCTTGCCCAGCTTGGCGAGATCTACC TGGCGCGCGGCGCCGACGACGGCGTCGAGGAATCGATCCGGCGCATCCAAGACTGCCTGGTCGCCTATGCGAGCATGCCC GCCGACGCCGAGAACGCGCGCATGATCTGCCGCTACTCGCGGCGGGCCAGGTTCCTGCAAACGGGCTTGGCCGCCGCACG CGGCGACCACGAAGGCGCCGCGGCGGCCCTGGACCTGTTGAGCGACACCGGCGGCGAATTCCCCGAGCTCGCCGCCGAAC ACGCGCAGCTGTGCGCTCGCGCGCGGGCGCTGTGCGCCACCGCGCTGTGCGACGACGACCTGCACGTGCAATCGGTTCCG TTGTGGGACAAGATACTTGAGCACATCGGCGACAGCGGCGGCGACGAGAACGCCGATCACCTGTGGGTCACCGCAGCCAC CGGATACGGCAGGTTCTGCGTCGAAACGGGGCGGTTGGCCGAAGCCGAGCCGTGGTTACGCCGCGCCGAGGCGCGGGCCG ACGCCCACGGCTGGGAATTAGCCAGGGCCAGAGCACAATTGGAGCGGGCCGCGGCGCGCTGGGCGGCCAACGACCATGCC GGCACCGAACAGCTGGTGTCGCAGGCCTATCCCATCATCGCCCGGCATGCCCGCGCGCACGACGTCGCACGCTGCTGGCT GTACCTGGGACTCACCCGGCTGGGGTCGGGCGCCCTGGAAGCCGCCGACGAATGCTGGGAACACGCCGAGCGGCACTGGC GCGAGTTGGGAAACCCGCTGCACCTTCACCGTATTCTGTTGCAGCGCAGCTGGATAGCGATCTTCTGGAGTCGCTTCGCC GACGCCGTCGAGCTGATCGCCCAGGCCCGGGAACTGCTGGACTCCTCACCGCGCAGCAGCTGGCTGCAGTACGCGCAACT GGACAGTCATCTCGGAACGGTGTGGCGCGCCGACGCTCTGGCGGACCTGGGTTTCGACAGCTCCGGCGACCCCGAGGAGT CGCTGCAGGAGACCGAGGCGCGCCAGGCCGAGGGCCTCGGCATCCTGCGCGGCGAGGTCGGCACACCGGAATACCGGCGC GGCATGAGCAAGCTGCAGCAGGCGGCCGAGTTGAAAGTGCCCGCCGCGCTGGCGGTCGACTCGGTGCGGTATTCGATCGC CGACGCCGACGCGCGAGCACGCTGGGCCACCACCATCGCGGCGCCCATCCTGGCCGGCGCGTTCGCGGTGGCCTGGGAGT GGGAGAACACCGCGCTCATCAGTGAGCTGGTGGAATACCACAGCGCGCGAGGGACTTTCGAAGCCCTGCAGCGCCCGCAG ACCGGCGAATGGGCGTCCACGGCCGTCGCATCGGTTCCGCTGGACACCGGCGCCGAGCCCGCTGCGCTGGCCGCCGCCGG GCCGCCGGTGGCCGGCGGTGTGTCGCTGACCCGGCTGGGGCCGTTGCCGCCGTTGCGGATGCACCCGGGCGAGGCGCCGA TCCTGGACCACTACCGCACGCTGGCCGTGCAACGCTACGGGCGCGCCGTCACCGCCGACGAGCCGGCCTGGTCGACGTGG CCGTGA
Upstream 100 bases:
>100_bases TGATCGGTTGCGGCCCACGAGCGGCGGACGTGCCTCACTCACGCGTCCGCCGCTCGCGGTTCGGCCGACCAGAGCACGGC CCCGGTCTTATGATGCAGCC
Downstream 100 bases:
>100_bases CCGAATCCGGCCGGCTGACACTGGTACTGCGCTACGCCGACCTCGGCATCGCCACCTACGCCAGCCTGCGGATCGTCGGG CAGCCCGAGCGGACCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MSIPDGLQRARRMALAADEAGARDLLLSLIPRIERDDRDDLMLEVLAQLGEIYLARGADDGVEESIRRIQDCLVAYASMP ADAENARMICRYSRRARFLQTGLAAARGDHEGAAAALDLLSDTGGEFPELAAEHAQLCARARALCATALCDDDLHVQSVP LWDKILEHIGDSGGDENADHLWVTAATGYGRFCVETGRLAEAEPWLRRAEARADAHGWELARARAQLERAAARWAANDHA GTEQLVSQAYPIIARHARAHDVARCWLYLGLTRLGSGALEAADECWEHAERHWRELGNPLHLHRILLQRSWIAIFWSRFA DAVELIAQARELLDSSPRSSWLQYAQLDSHLGTVWRADALADLGFDSSGDPEESLQETEARQAEGLGILRGEVGTPEYRR GMSKLQQAAELKVPAALAVDSVRYSIADADARARWATTIAAPILAGAFAVAWEWENTALISELVEYHSARGTFEALQRPQ TGEWASTAVASVPLDTGAEPAALAAAGPPVAGGVSLTRLGPLPPLRMHPGEAPILDHYRTLAVQRYGRAVTADEPAWSTW P
Sequences:
>Translated_561_residues MSIPDGLQRARRMALAADEAGARDLLLSLIPRIERDDRDDLMLEVLAQLGEIYLARGADDGVEESIRRIQDCLVAYASMP ADAENARMICRYSRRARFLQTGLAAARGDHEGAAAALDLLSDTGGEFPELAAEHAQLCARARALCATALCDDDLHVQSVP LWDKILEHIGDSGGDENADHLWVTAATGYGRFCVETGRLAEAEPWLRRAEARADAHGWELARARAQLERAAARWAANDHA GTEQLVSQAYPIIARHARAHDVARCWLYLGLTRLGSGALEAADECWEHAERHWRELGNPLHLHRILLQRSWIAIFWSRFA DAVELIAQARELLDSSPRSSWLQYAQLDSHLGTVWRADALADLGFDSSGDPEESLQETEARQAEGLGILRGEVGTPEYRR GMSKLQQAAELKVPAALAVDSVRYSIADADARARWATTIAAPILAGAFAVAWEWENTALISELVEYHSARGTFEALQRPQ TGEWASTAVASVPLDTGAEPAALAAAGPPVAGGVSLTRLGPLPPLRMHPGEAPILDHYRTLAVQRYGRAVTADEPAWSTW P >Mature_560_residues SIPDGLQRARRMALAADEAGARDLLLSLIPRIERDDRDDLMLEVLAQLGEIYLARGADDGVEESIRRIQDCLVAYASMPA DAENARMICRYSRRARFLQTGLAAARGDHEGAAAALDLLSDTGGEFPELAAEHAQLCARARALCATALCDDDLHVQSVPL WDKILEHIGDSGGDENADHLWVTAATGYGRFCVETGRLAEAEPWLRRAEARADAHGWELARARAQLERAAARWAANDHAG TEQLVSQAYPIIARHARAHDVARCWLYLGLTRLGSGALEAADECWEHAERHWRELGNPLHLHRILLQRSWIAIFWSRFAD AVELIAQARELLDSSPRSSWLQYAQLDSHLGTVWRADALADLGFDSSGDPEESLQETEARQAEGLGILRGEVGTPEYRRG MSKLQQAAELKVPAALAVDSVRYSIADADARARWATTIAAPILAGAFAVAWEWENTALISELVEYHSARGTFEALQRPQT GEWASTAVASVPLDTGAEPAALAAAGPPVAGGVSLTRLGPLPPLRMHPGEAPILDHYRTLAVQRYGRAVTADEPAWSTWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61265; Mature: 61134
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPDGLQRARRMALAADEAGARDLLLSLIPRIERDDRDDLMLEVLAQLGEIYLARGADD CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCC GVEESIRRIQDCLVAYASMPADAENARMICRYSRRARFLQTGLAAARGDHEGAAAALDLL CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SDTGGEFPELAAEHAQLCARARALCATALCDDDLHVQSVPLWDKILEHIGDSGGDENADH HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCE LWVTAATGYGRFCVETGRLAEAEPWLRRAEARADAHGWELARARAQLERAAARWAANDHA EEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC GTEQLVSQAYPIIARHARAHDVARCWLYLGLTRLGSGALEAADECWEHAERHWRELGNPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHH HLHRILLQRSWIAIFWSRFADAVELIAQARELLDSSPRSSWLQYAQLDSHLGTVWRADAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ADLGFDSSGDPEESLQETEARQAEGLGILRGEVGTPEYRRGMSKLQQAAELKVPAALAVD HHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHH SVRYSIADADARARWATTIAAPILAGAFAVAWEWENTALISELVEYHSARGTFEALQRPQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCHHHHHCCCC TGEWASTAVASVPLDTGAEPAALAAAGPPVAGGVSLTRLGPLPPLRMHPGEAPILDHYRT CCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHH LAVQRYGRAVTADEPAWSTWP HHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SIPDGLQRARRMALAADEAGARDLLLSLIPRIERDDRDDLMLEVLAQLGEIYLARGADD CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCC GVEESIRRIQDCLVAYASMPADAENARMICRYSRRARFLQTGLAAARGDHEGAAAALDLL CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SDTGGEFPELAAEHAQLCARARALCATALCDDDLHVQSVPLWDKILEHIGDSGGDENADH HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCE LWVTAATGYGRFCVETGRLAEAEPWLRRAEARADAHGWELARARAQLERAAARWAANDHA EEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC GTEQLVSQAYPIIARHARAHDVARCWLYLGLTRLGSGALEAADECWEHAERHWRELGNPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHH HLHRILLQRSWIAIFWSRFADAVELIAQARELLDSSPRSSWLQYAQLDSHLGTVWRADAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ADLGFDSSGDPEESLQETEARQAEGLGILRGEVGTPEYRRGMSKLQQAAELKVPAALAVD HHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHH SVRYSIADADARARWATTIAAPILAGAFAVAWEWENTALISELVEYHSARGTFEALQRPQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCHHHHHCCCC TGEWASTAVASVPLDTGAEPAALAAAGPPVAGGVSLTRLGPLPPLRMHPGEAPILDHYRT CCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHH LAVQRYGRAVTADEPAWSTWP HHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA