| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406412
Identifier: 41406412
GI number: 41406412
Start: 336809
End: 338161
Strand: Direct
Name: 41406412
Synonym: MAP0314
Alternate gene names: NA
Gene position: 336809-338161 (Clockwise)
Preceding gene: 161611210
Following gene: 41406413
Centisome position: 6.97
GC content: 73.91
Gene sequence:
>1353_bases ATGAGGGCGACCCGCTGCGCCCGGCGACAAGCGCCGCGCTTGCGATCGCCCTTAAACTCTCCGGGTGCTGACCACCCGTG CCCGCCTGGCCCTGGCCGCGGGAGCGAGCGCGCGCTGGGCGTCCCGGGTGACCGGCCGCGGCGCCGGCGCCATGATCGGC GGGCTGGTCGCGATGACGCTGGACCGCTCGGTGCTGCGGCAACTGGCCACCGGCCGGCGCACCGTCGTCGTCACCGGCAC CAACGGCAAGTCGACCACCACCCGGATGACCGCCGCCGCGCTGGCCACCATGGGATCGGTGGCCACCAACGCCGAGGGCG CCAACATGGACGCCGGCCTGGTCGCGGCGCTGGCCGCCAACCGCGGCGCCCGGCTGGCCGCCCTGGAGGTCGACGAGATG CACGTGCCACACGTGTCCGACGCCGTCCGCCCGGGCGTCGTCGTGCTGCTCAACCTGTCCCGCGACCAGCTGGACCGGGT CGGCGAGATCAACGTCATCGAGCGGACCCTGCGCGCCGGCCTGGCCCGGCACCCGGACGCGGTCGTCGTGGCCAACTGCG ACGACGTGCTGATGACCTCCGCGGCCTACGACAGCCCCCACGTGGTGTGGGTGGCCGCCGGCGGCTCCTGGGCGAACGAT TCGGTGAGCTGCCCGCGCAGCGGCGAGGTGATCGTCCGCGAGCAGGGGCATTGGTATTCCACCGGCGCCGACTTCAAGCG GCCCAGCCCGCACTGGTGGTTCGACCCACAGGACGGCGGCAACCTGTACGGCCCCGGCGGTGTGGCGCTGCCGATGCGGT TGGCGCTACCGGGCGCGGTGAACCGCGGCAACGCCGCCCAGGCCGTGGCCGCCGCGGTCGCGTTGGGCGCCGATCCGGCG GCGGCGGTGACGGCCGTGTCGACGGTCGACGAGGTCGCCGGCCGGTATCGCACGGTGCGGGTCGGCGGGCACGACGTCCG GATGCTGCTGGCCAAGAATCCGGCGGGCTGGCAGGAAGCGCTGTCGATGGTGGACCCGCACGCCGACGGGGTGGTCATCT CGGTCAACGGCCGGGTGCCCGACGGCGAGGACCTGTCCTGGCTGTGGGACGTGCGCTTCGAGCACTTCAACGACGCGTTC CAGACCACCCCGGTGGTGGCCGCCGGGGAGCGCGGCACCGACCTGGCGGTGCGGCTCGGGTACGCGGGTGTCGAGCACAC CCTGGTGCACGACACCGTCGCCGCCATCGAGTCCTGCCCGCCCGGGCGGGTGGAGGTCGTCGCCAACTACACCGCGTTCC TGGCGCTGCAACGAGCGGTGGCGCGCCATGGCTGATTCGGTCGTGCGGATCGGGCTGGTGCTGCCCGACGTGA
Upstream 100 bases:
>100_bases GCCCGGCGACAAGCGCCGCGCTTGCGATCGCACGGAACCCGATGAGGGCGACCCGCTGCGCCCGGCGACAAGCGCCGCGC TTGCGATCGCACCGAACTCG
Downstream 100 bases:
>100_bases TGGGCACCTACGGCGACGGCGGCAACGCGCTGGTGCTGCGACAGCGACTGCGGCTGCGCGGCATCGACGCCGAGATCGTT GAGCTCACGCTGGCCGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MRATRCARRQAPRLRSPLNSPGADHPCPPGPGRGSERALGVPGDRPRRRRHDRRAGRDDAGPLGAAATGHRPAHRRRHRH QRQVDHHPDDRRRAGHHGIGGHQRRGRQHGRRPGRGAGRQPRRPAGRPGGRRDARATRVRRRPPGRRRAAQPVPRPAGPG RRDQRHRADPARRPGPAPGRGRRGQLRRRADDLRGLRQPPRGVGGRRRLLGERFGELPAQRRGDRPRAGALVFHRRRLQA AQPALVVRPTGRRQPVRPRRCGAADAVGATGRGEPRQRRPGRGRRGRVGRRSGGGGDGRVDGRRGRRPVSHGAGRRARRP DAAGQESGGLAGSAVDGGPARRRGGHLGQRPGARRRGPVLAVGRALRALQRRVPDHPGGGRRGARHRPGGAARVRGCRAH PGARHRRRHRVLPARAGGGRRQLHRVPGAATSGGAPWLIRSCGSGWCCPT
Sequences:
>Translated_450_residues MRATRCARRQAPRLRSPLNSPGADHPCPPGPGRGSERALGVPGDRPRRRRHDRRAGRDDAGPLGAAATGHRPAHRRRHRH QRQVDHHPDDRRRAGHHGIGGHQRRGRQHGRRPGRGAGRQPRRPAGRPGGRRDARATRVRRRPPGRRRAAQPVPRPAGPG RRDQRHRADPARRPGPAPGRGRRGQLRRRADDLRGLRQPPRGVGGRRRLLGERFGELPAQRRGDRPRAGALVFHRRRLQA AQPALVVRPTGRRQPVRPRRCGAADAVGATGRGEPRQRRPGRGRRGRVGRRSGGGGDGRVDGRRGRRPVSHGAGRRARRP DAAGQESGGLAGSAVDGGPARRRGGHLGQRPGARRRGPVLAVGRALRALQRRVPDHPGGGRRGARHRPGGAARVRGCRAH PGARHRRRHRVLPARAGGGRRQLHRVPGAATSGGAPWLIRSCGSGWCCPT >Mature_450_residues MRATRCARRQAPRLRSPLNSPGADHPCPPGPGRGSERALGVPGDRPRRRRHDRRAGRDDAGPLGAAATGHRPAHRRRHRH QRQVDHHPDDRRRAGHHGIGGHQRRGRQHGRRPGRGAGRQPRRPAGRPGGRRDARATRVRRRPPGRRRAAQPVPRPAGPG RRDQRHRADPARRPGPAPGRGRRGQLRRRADDLRGLRQPPRGVGGRRRLLGERFGELPAQRRGDRPRAGALVFHRRRLQA AQPALVVRPTGRRQPVRPRRCGAADAVGATGRGEPRQRRPGRGRRGRVGRRSGGGGDGRVDGRRGRRPVSHGAGRRARRP DAAGQESGGLAGSAVDGGPARRRGGHLGQRPGARRRGPVLAVGRALRALQRRVPDHPGGGRRGARHRPGGAARVRGCRAH PGARHRRRHRVLPARAGGGRRQLHRVPGAATSGGAPWLIRSCGSGWCCPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49072; Mature: 49072
Theoretical pI: Translated: 12.95; Mature: 12.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRATRCARRQAPRLRSPLNSPGADHPCPPGPGRGSERALGVPGDRPRRRRHDRRAGRDDA CCCHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC GPLGAAATGHRPAHRRRHRHQRQVDHHPDDRRRAGHHGIGGHQRRGRQHGRRPGRGAGRQ CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCC PRRPAGRPGGRRDARATRVRRRPPGRRRAAQPVPRPAGPGRRDQRHRADPARRPGPAPGR CCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC GRRGQLRRRADDLRGLRQPPRGVGGRRRLLGERFGELPAQRRGDRPRAGALVFHRRRLQA CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHH AQPALVVRPTGRRQPVRPRRCGAADAVGATGRGEPRQRRPGRGRRGRVGRRSGGGGDGRV CCCEEEECCCCCCCCCCHHHCCCHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC DGRRGRRPVSHGAGRRARRPDAAGQESGGLAGSAVDGGPARRRGGHLGQRPGARRRGPVL CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHH AVGRALRALQRRVPDHPGGGRRGARHRPGGAARVRGCRAHPGARHRRRHRVLPARAGGGR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCH RQLHRVPGAATSGGAPWLIRSCGSGWCCPT HHHHHCCCCCCCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure MRATRCARRQAPRLRSPLNSPGADHPCPPGPGRGSERALGVPGDRPRRRRHDRRAGRDDA CCCHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC GPLGAAATGHRPAHRRRHRHQRQVDHHPDDRRRAGHHGIGGHQRRGRQHGRRPGRGAGRQ CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCC PRRPAGRPGGRRDARATRVRRRPPGRRRAAQPVPRPAGPGRRDQRHRADPARRPGPAPGR CCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC GRRGQLRRRADDLRGLRQPPRGVGGRRRLLGERFGELPAQRRGDRPRAGALVFHRRRLQA CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHH AQPALVVRPTGRRQPVRPRRCGAADAVGATGRGEPRQRRPGRGRRGRVGRRSGGGGDGRV CCCEEEECCCCCCCCCCHHHCCCHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC DGRRGRRPVSHGAGRRARRPDAAGQESGGLAGSAVDGGPARRRGGHLGQRPGARRRGPVL CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHH AVGRALRALQRRVPDHPGGGRRGARHRPGGAARVRGCRAHPGARHRRRHRVLPARAGGGR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCH RQLHRVPGAATSGGAPWLIRSCGSGWCCPT HHHHHCCCCCCCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA