| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is leuA
Identifier: 161611210
GI number: 161611210
Start: 333939
End: 335633
Strand: Direct
Name: leuA
Synonym: MAP0312
Alternate gene names: 161611210
Gene position: 333939-335633 (Clockwise)
Preceding gene: 41406399
Following gene: 41406412
Centisome position: 6.91
GC content: 68.14
Gene sequence:
>1695_bases ATGCCGGTCAACCGGTACCGGCCGTTCGCCGAGGAGGTCGAGCCCATCCGGCTGCCCGACCGCACCTGGCCCGACAAGGT CATCGACCGTGCCCCGCTGTGGTGCGCGGTGGACCTGCGCGACGGCAACCAGGCGCTGATCGACCCGATGAGCCCGGCCC GCAAGCGCCGCATGTTCGACCTGCTGGTCCGCATGGGCTACAAGGAGATCGAGGTCGGCTTCCCGTCGGCCAGCCAGACC GATTTCGACTTCGTCCGCGAGATCATCACCGAGGGCGCCATTCCCGACGACGTCACCATTCAGGTGCTGACCCAGTGCCG GCCGGAACTGATCGAGCGCACCTTCGCCGCGTGCCAGGGCGCGCCGCAGGCCATCGTGCACTTCTACAACTCGACGTCAA TCCTGCAGCGGCGCGTGGTATTTCGCGCCGACCGGGCCGCGGTGCAGGAGATCGCCGTGGCCGGCGCCCGCAAGTGCGTC GAGGAGGCCGCCAAGTACCCCGAGACGCAGTGGCGGTTCGAGTACTCGCCGGAGTCCTACACCGGAACCGAACTGGAGTA CGCCAAGCAGGTGTGCGACGCGGTCGGCGAAATCATAAGGCCCACAACGGAAAACCCGATCATCTTCAACCTGCCCGCCA CGGTGGAGATGGCCACCCCCAACGTGTACGCCGACTCCATCGAGTGGATGAGCCGCAATCTGGCCCGCCGCGACTCCGTC ATCCTGAGCCTGCACCCGCACAACGACCGCGGAACCGCCGTCGCCGCAGCGGAATTGGGCTATGCGGCCGGCGCCGACCG GATCGAGGGCTGCCTGTTCGGCAACGGCGAACGCACCGGCAACGTGTGCCTGGTGACGCTGGGGCTGAACCTGTTCTCCC GCGGCGTGGACCCGCAGATCGACTTCTCCAACATCGACGAGATCCGCCGCACGGTGGAGTACTGCAATCAGCTGCCGGTG CACGAGCGGCACCCCTACGGCGGCGACCTGGTCTACACCGCGTTCTCCGGCAGCCACCAGGACGCCATCAACAAGGGCCT GGACCAGATGAAGATCGACGCCGACGCCGCCGACACCGACGTCGAGGACATGCTCTGGCAGGTGCCGTATCTGCCGATCG ACCCCAAGGACGTCGGGCGCACCTACGAGGCGGTGATCCGGGTGAACTCGCAGTCCGGCAAGGGCGGGGTGGCCTACATC ATGAAGGCCGATCACGGCCTGGCCCTGCCGCGCCGGCTGCAGATCGAGTTCTCCCAGGTGATCCAGAAGATCAGCGAGGG CGAGGGCGGCGAGGTCAGCCCCAAGGAGATGTGGGACGCGTTCTTCGAGGAGTACCTGGCCCCGGTGTGGCCGCTGGAGC GGGTCAAGCAGCGCGTCGACGCCTCCGACGAGGACAGCGGCGTCACCAGCATCTCCGCGACGGTCAAGATCAACGGGGAG CAGACCGAGATCAACGGGACCGGCAACGGCCCGCTGGCCGCGTTCGTGCACGCGCTCGCCGGGGTCGGGTTCGACGTGGC GGTGCTGGACTACTCCGAGCACGCCATGAGTTCGGGCGACGACGCGCAGGCCGCCGCGTATGTGGAGGCGTCGGTCAACG GTCGGACGGTGTGGGGTGTCGGCATCGCCCCGTCCATCACCACCGCCTCGTTGCGCGCGGTGGTGTCGGCGGTCAACCGC GCCGCCCGCGCCTGA
Upstream 100 bases:
>100_bases TTCCCATCCCGACGCCTTCAGCTCGTCCCGCAGCATCGTCAAACCCGCCGGCCCGCCCGGCCCCGGACAGCCCGCCTGGA ACCCCCAGCGCGGCTCCTCG
Downstream 100 bases:
>100_bases TCAGAACAACGCCAGCTGCGGATCGGGCGTGGCGTCGGTGAACTCGTCCATGCTGGTGCCGCCGATGACGGCGCGAACGC AGTCCAAAAACTGCGCGTCG
Product: 2-isopropylmalate synthase
Products: NA
Alternate protein names: Alpha-IPM synthase; Alpha-isopropylmalate synthase [H]
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MPVNRYRPFAEEVEPIRLPDRTWPDKVIDRAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQT DFDFVREIITEGAIPDDVTIQVLTQCRPELIERTFAACQGAPQAIVHFYNSTSILQRRVVFRADRAAVQEIAVAGARKCV EEAAKYPETQWRFEYSPESYTGTELEYAKQVCDAVGEIIRPTTENPIIFNLPATVEMATPNVYADSIEWMSRNLARRDSV ILSLHPHNDRGTAVAAAELGYAAGADRIEGCLFGNGERTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYCNQLPV HERHPYGGDLVYTAFSGSHQDAINKGLDQMKIDADAADTDVEDMLWQVPYLPIDPKDVGRTYEAVIRVNSQSGKGGVAYI MKADHGLALPRRLQIEFSQVIQKISEGEGGEVSPKEMWDAFFEEYLAPVWPLERVKQRVDASDEDSGVTSISATVKINGE QTEINGTGNGPLAAFVHALAGVGFDVAVLDYSEHAMSSGDDAQAAAYVEASVNGRTVWGVGIAPSITTASLRAVVSAVNR AARA
Sequences:
>Translated_564_residues MPVNRYRPFAEEVEPIRLPDRTWPDKVIDRAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQT DFDFVREIITEGAIPDDVTIQVLTQCRPELIERTFAACQGAPQAIVHFYNSTSILQRRVVFRADRAAVQEIAVAGARKCV EEAAKYPETQWRFEYSPESYTGTELEYAKQVCDAVGEIIRPTTENPIIFNLPATVEMATPNVYADSIEWMSRNLARRDSV ILSLHPHNDRGTAVAAAELGYAAGADRIEGCLFGNGERTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYCNQLPV HERHPYGGDLVYTAFSGSHQDAINKGLDQMKIDADAADTDVEDMLWQVPYLPIDPKDVGRTYEAVIRVNSQSGKGGVAYI MKADHGLALPRRLQIEFSQVIQKISEGEGGEVSPKEMWDAFFEEYLAPVWPLERVKQRVDASDEDSGVTSISATVKINGE QTEINGTGNGPLAAFVHALAGVGFDVAVLDYSEHAMSSGDDAQAAAYVEASVNGRTVWGVGIAPSITTASLRAVVSAVNR AARA >Mature_563_residues PVNRYRPFAEEVEPIRLPDRTWPDKVIDRAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQTD FDFVREIITEGAIPDDVTIQVLTQCRPELIERTFAACQGAPQAIVHFYNSTSILQRRVVFRADRAAVQEIAVAGARKCVE EAAKYPETQWRFEYSPESYTGTELEYAKQVCDAVGEIIRPTTENPIIFNLPATVEMATPNVYADSIEWMSRNLARRDSVI LSLHPHNDRGTAVAAAELGYAAGADRIEGCLFGNGERTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYCNQLPVH ERHPYGGDLVYTAFSGSHQDAINKGLDQMKIDADAADTDVEDMLWQVPYLPIDPKDVGRTYEAVIRVNSQSGKGGVAYIM KADHGLALPRRLQIEFSQVIQKISEGEGGEVSPKEMWDAFFEEYLAPVWPLERVKQRVDASDEDSGVTSISATVKINGEQ TEINGTGNGPLAAFVHALAGVGFDVAVLDYSEHAMSSGDDAQAAAYVEASVNGRTVWGVGIAPSITTASLRAVVSAVNRA ARA
Specific function: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786261, Length=536, Percent_Identity=25.9328358208955, Blast_Score=113, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6324225, Length=570, Percent_Identity=46.140350877193, Blast_Score=510, Evalue=1e-145, Organism=Saccharomyces cerevisiae, GI6324682, Length=576, Percent_Identity=45.8333333333333, Blast_Score=501, Evalue=1e-142,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013709 - InterPro: IPR002034 - InterPro: IPR013785 - InterPro: IPR005668 - InterPro: IPR000891 [H]
Pfam domain/function: PF00682 HMGL-like; PF08502 LeuA_dimer [H]
EC number: =2.3.3.13 [H]
Molecular weight: Translated: 62091; Mature: 61960
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00815 AIPM_HOMOCIT_SYNTH_1 ; PS00816 AIPM_HOMOCIT_SYNTH_2 ; PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVNRYRPFAEEVEPIRLPDRTWPDKVIDRAPLWCAVDLRDGNQALIDPMSPARKRRMFD CCCCCCCCHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHHHH LLVRMGYKEIEVGFPSASQTDFDFVREIITEGAIPDDVTIQVLTQCRPELIERTFAACQG HHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC APQAIVHFYNSTSILQRRVVFRADRAAVQEIAVAGARKCVEEAAKYPETQWRFEYSPESY CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC TGTELEYAKQVCDAVGEIIRPTTENPIIFNLPATVEMATPNVYADSIEWMSRNLARRDSV CCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCE ILSLHPHNDRGTAVAAAELGYAAGADRIEGCLFGNGERTGNVCLVTLGLNLFSRGVDPQI EEEEECCCCCCCEEEHHHHCCCCCCHHHCEEEECCCCCCCCEEEEEECHHHHHCCCCCCC DFSNIDEIRRTVEYCNQLPVHERHPYGGDLVYTAFSGSHQDAINKGLDQMKIDADAADTD CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHCCHHHEEECCCCCCCC VEDMLWQVPYLPIDPKDVGRTYEAVIRVNSQSGKGGVAYIMKADHGLALPRRLQIEFSQV HHHHHHHCCCCCCCHHHHCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH IQKISEGEGGEVSPKEMWDAFFEEYLAPVWPLERVKQRVDASDEDSGVTSISATVKINGE HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEECCC QTEINGTGNGPLAAFVHALAGVGFDVAVLDYSEHAMSSGDDAQAAAYVEASVNGRTVWGV EEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCEEEEEEECCCCEEEEEE GIAPSITTASLRAVVSAVNRAARA CCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PVNRYRPFAEEVEPIRLPDRTWPDKVIDRAPLWCAVDLRDGNQALIDPMSPARKRRMFD CCCCCCCHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHHHH LLVRMGYKEIEVGFPSASQTDFDFVREIITEGAIPDDVTIQVLTQCRPELIERTFAACQG HHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC APQAIVHFYNSTSILQRRVVFRADRAAVQEIAVAGARKCVEEAAKYPETQWRFEYSPESY CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC TGTELEYAKQVCDAVGEIIRPTTENPIIFNLPATVEMATPNVYADSIEWMSRNLARRDSV CCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCE ILSLHPHNDRGTAVAAAELGYAAGADRIEGCLFGNGERTGNVCLVTLGLNLFSRGVDPQI EEEEECCCCCCCEEEHHHHCCCCCCHHHCEEEECCCCCCCCEEEEEECHHHHHCCCCCCC DFSNIDEIRRTVEYCNQLPVHERHPYGGDLVYTAFSGSHQDAINKGLDQMKIDADAADTD CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHCCHHHEEECCCCCCCC VEDMLWQVPYLPIDPKDVGRTYEAVIRVNSQSGKGGVAYIMKADHGLALPRRLQIEFSQV HHHHHHHCCCCCCCHHHHCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH IQKISEGEGGEVSPKEMWDAFFEEYLAPVWPLERVKQRVDASDEDSGVTSISATVKINGE HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEECCC QTEINGTGNGPLAAFVHALAGVGFDVAVLDYSEHAMSSGDDAQAAAYVEASVNGRTVWGV EEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCEEEEEEECCCCEEEEEE GIAPSITTASLRAVVSAVNRAARA CCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA