Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41406348

Identifier: 41406348

GI number: 41406348

Start: 271296

End: 271883

Strand: Direct

Name: 41406348

Synonym: MAP0250

Alternate gene names: NA

Gene position: 271296-271883 (Clockwise)

Preceding gene: 41406342

Following gene: 41406351

Centisome position: 5.62

GC content: 72.11

Gene sequence:

>588_bases
ATGGCTCCTGATTTGCGACCCGGACCGGATTCCCCGCCGACCGACGAGCTGGACGGCGCCGAGGCGGCGCTGCGGGTGAT
GCAGCAGGTGCTGCACCCCATCGCCGCCGACGACATGTCCCGCCCGACCCCGTGCGCGCAGTTCGACGTGACGCGGTTGA
CGGACCATCTGCTCAAGTCGCTCGAGGCGCTGGGCGGCATGGCCGGCGCCGACGTCCCGGACCATGCGGACAGCGGGGAC
TCGGTGGAACGCCAGGTGATCGCGGTGGCCCGCCCCGCCCTGGACGCGTGGCGGCAGCGCGGTCTGGACGGCACCGTGTC
GTTCGGCGGCGGTGAGATGCCGGCCAGGAATGCCTGCGCCATTCTGGCGCTCGAATTGCTGGTCCACGCTTGGGATTACG
CGCGGGCGGTGGGCCGCGACGTCCGGGCACCCGAGCCGTTGGCCGAATACGTGCTGGGGCTGGCGCACCGGGTCATCCGT
CCCGAGGTGCGCGGTCAGGCCGGGTTCGACGACCCGGTCGAGGTGCCCGCCGACGCCGATGCGTTGACCAAGCTGGTCGC
ATTCACCGGCCGCAACCCGGCCCGCTAA

Upstream 100 bases:

>100_bases
TTGCCCGGGCCGATCAGCGTCACCTGGGCGACATGGCCCTTCTTCTCCACGGTGACCGATTCGTATGCTTGCGCCATATC
GAGACCGTAGCGTGGCGAAC

Downstream 100 bases:

>100_bases
GCGCGAGGCCTTCACCGAACGTGCATTCAGTGCGAAATCCGGCGCGTTTTTTCGCGGCCAGTGCACGCTCGGCGAAGGCC
CTAGACCCGCTCTAGGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MAPDLRPGPDSPPTDELDGAEAALRVMQQVLHPIAADDMSRPTPCAQFDVTRLTDHLLKSLEALGGMAGADVPDHADSGD
SVERQVIAVARPALDAWRQRGLDGTVSFGGGEMPARNACAILALELLVHAWDYARAVGRDVRAPEPLAEYVLGLAHRVIR
PEVRGQAGFDDPVEVPADADALTKLVAFTGRNPAR

Sequences:

>Translated_195_residues
MAPDLRPGPDSPPTDELDGAEAALRVMQQVLHPIAADDMSRPTPCAQFDVTRLTDHLLKSLEALGGMAGADVPDHADSGD
SVERQVIAVARPALDAWRQRGLDGTVSFGGGEMPARNACAILALELLVHAWDYARAVGRDVRAPEPLAEYVLGLAHRVIR
PEVRGQAGFDDPVEVPADADALTKLVAFTGRNPAR
>Mature_194_residues
APDLRPGPDSPPTDELDGAEAALRVMQQVLHPIAADDMSRPTPCAQFDVTRLTDHLLKSLEALGGMAGADVPDHADSGDS
VERQVIAVARPALDAWRQRGLDGTVSFGGGEMPARNACAILALELLVHAWDYARAVGRDVRAPEPLAEYVLGLAHRVIRP
EVRGQAGFDDPVEVPADADALTKLVAFTGRNPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20754; Mature: 20622

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPDLRPGPDSPPTDELDGAEAALRVMQQVLHPIAADDMSRPTPCAQFDVTRLTDHLLKS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LEALGGMAGADVPDHADSGDSVERQVIAVARPALDAWRQRGLDGTVSFGGGEMPARNACA
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHH
ILALELLVHAWDYARAVGRDVRAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADAD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
ALTKLVAFTGRNPAR
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
APDLRPGPDSPPTDELDGAEAALRVMQQVLHPIAADDMSRPTPCAQFDVTRLTDHLLKS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LEALGGMAGADVPDHADSGDSVERQVIAVARPALDAWRQRGLDGTVSFGGGEMPARNACA
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHH
ILALELLVHAWDYARAVGRDVRAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADAD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
ALTKLVAFTGRNPAR
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA