| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406316
Identifier: 41406316
GI number: 41406316
Start: 225265
End: 226275
Strand: Direct
Name: 41406316
Synonym: MAP0218
Alternate gene names: NA
Gene position: 225265-226275 (Clockwise)
Preceding gene: 41406315
Following gene: 41406317
Centisome position: 4.66
GC content: 71.22
Gene sequence:
>1011_bases ATGCCTACCAACGCCCGGCGCAAGCGCCGTCGCACCCTGGCCTGGATCGCCGCCCTGTCGGTGGCCGGCGTCGTGTTGTT GGTCATCGTGGCCGCGGTCGTGGTGCTGCGTGGCCGCGAGGCGCCGCCCAGCGCGGTGCCGCCCGGCGTGCTGCCGCCCA CCTCGACGACCGGCCATCCGCACAAGCCGCGGCCGGCGTCGCAGGACGCCTCCTGCCCGGACGTGCTGCTGGTCAACGTG CCCGGCACCTGGGAATCGGCCCCGCAGGACGACCCGGGGAACCCGCTGCAGTTCCCGAACGCGTTGCTGCACAAGGTGAC CGCGAGCCTCACCGAGCAGTTCCCGCCGTCGCGGTTGCAGGCCTACACCACTCCCTACACCGCGCAGTTCCACAACCCGT TGAGCGGTGACACGCAGATGACCTACAACGCCAGCCGGGCCGAGGGCACCCGGGCCACCGTCGCGGCGATGACCGACATG AACAACAAGTGCCCGCTGACCAGCTACGTGCTGATGGGCTTCTCGCAGGGCGCGGTGATCGCCGGCGACATCGCCAGCGA CATCGGCAACGGCCGCGGGCCGGTGGACGACGACCTGGTGCTGGGTGTGACGTTGATCGCCGACGGCCGCCGCCAGCAGG GGGTGGGCAACGACATCGGGCCCAACCCTCCCGGGCAGGGCGCCGAGGTGACCCTGCACGAGGTGCCCATCCTGTCCGGG CTGGGCCTGACCATGACCGGCGCGCGGCCCGGCGGGTTCGGCGACCTCAACGCCAAGACCAACGAGATCTGCGCGCCGGG CGACCTGATCTGCGCCGCGCCCGAGGAGGCCTTCAGCGTGGCCAACCTGCCCGCCACGCTGAACACCCTGGCCGGCGGTG CCGGCCAACCGGTCCACGCGCTGTACGCCACCACCCAGTGCTGGAGCCTGGATGGGGTGCCGGCCACCGACTGGACGTTG AACTGGGCTCACGGATTGATCGCGAATGCGCCACAACCCAAACACGGATGA
Upstream 100 bases:
>100_bases GGCCGGGCTGACCACCCAGGGCGAGCCGGTACCGTGTAGAGCGTGCAGCAGAGCGCGGGCGTCGCGCCGCTGCGTCCACC CGCTCTGCCAGCAGGAGAAC
Downstream 100 bases:
>100_bases TCGGGGCGGCCGGACACAGCCGTCAGGTGGCCGTTGCCGTTGGCCATCGGCGGTACCTTGTGATTTGGTCTGCCGTGGGC GGCCCCGTAACATTAAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Carbohydrate Esterase; Secreted Protein; Envelope Lipids Regulation Factor
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MPTNARRKRRRTLAWIAALSVAGVVLLVIVAAVVVLRGREAPPSAVPPGVLPPTSTTGHPHKPRPASQDASCPDVLLVNV PGTWESAPQDDPGNPLQFPNALLHKVTASLTEQFPPSRLQAYTTPYTAQFHNPLSGDTQMTYNASRAEGTRATVAAMTDM NNKCPLTSYVLMGFSQGAVIAGDIASDIGNGRGPVDDDLVLGVTLIADGRRQQGVGNDIGPNPPGQGAEVTLHEVPILSG LGLTMTGARPGGFGDLNAKTNEICAPGDLICAAPEEAFSVANLPATLNTLAGGAGQPVHALYATTQCWSLDGVPATDWTL NWAHGLIANAPQPKHG
Sequences:
>Translated_336_residues MPTNARRKRRRTLAWIAALSVAGVVLLVIVAAVVVLRGREAPPSAVPPGVLPPTSTTGHPHKPRPASQDASCPDVLLVNV PGTWESAPQDDPGNPLQFPNALLHKVTASLTEQFPPSRLQAYTTPYTAQFHNPLSGDTQMTYNASRAEGTRATVAAMTDM NNKCPLTSYVLMGFSQGAVIAGDIASDIGNGRGPVDDDLVLGVTLIADGRRQQGVGNDIGPNPPGQGAEVTLHEVPILSG LGLTMTGARPGGFGDLNAKTNEICAPGDLICAAPEEAFSVANLPATLNTLAGGAGQPVHALYATTQCWSLDGVPATDWTL NWAHGLIANAPQPKHG >Mature_335_residues PTNARRKRRRTLAWIAALSVAGVVLLVIVAAVVVLRGREAPPSAVPPGVLPPTSTTGHPHKPRPASQDASCPDVLLVNVP GTWESAPQDDPGNPLQFPNALLHKVTASLTEQFPPSRLQAYTTPYTAQFHNPLSGDTQMTYNASRAEGTRATVAAMTDMN NKCPLTSYVLMGFSQGAVIAGDIASDIGNGRGPVDDDLVLGVTLIADGRRQQGVGNDIGPNPPGQGAEVTLHEVPILSGL GLTMTGARPGGFGDLNAKTNEICAPGDLICAAPEEAFSVANLPATLNTLAGGAGQPVHALYATTQCWSLDGVPATDWTLN WAHGLIANAPQPKHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34907; Mature: 34776
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNARRKRRRTLAWIAALSVAGVVLLVIVAAVVVLRGREAPPSAVPPGVLPPTSTTGHP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC HKPRPASQDASCPDVLLVNVPGTWESAPQDDPGNPLQFPNALLHKVTASLTEQFPPSRLQ CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHE AYTTPYTAQFHNPLSGDTQMTYNASRAEGTRATVAAMTDMNNKCPLTSYVLMGFSQGAVI EECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEE AGDIASDIGNGRGPVDDDLVLGVTLIADGRRQQGVGNDIGPNPPGQGAEVTLHEVPILSG ECHHHHHHCCCCCCCCCCCEEEEEEEECCCHHCCCCCCCCCCCCCCCCEEEEEECCEECC LGLTMTGARPGGFGDLNAKTNEICAPGDLICAAPEEAFSVANLPATLNTLAGGAGQPVHA CCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHCCCCCCCCEE LYATTQCWSLDGVPATDWTLNWAHGLIANAPQPKHG EEEEHHEEECCCCCCCCCEEHHHHHHHCCCCCCCCC >Mature Secondary Structure PTNARRKRRRTLAWIAALSVAGVVLLVIVAAVVVLRGREAPPSAVPPGVLPPTSTTGHP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC HKPRPASQDASCPDVLLVNVPGTWESAPQDDPGNPLQFPNALLHKVTASLTEQFPPSRLQ CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHE AYTTPYTAQFHNPLSGDTQMTYNASRAEGTRATVAAMTDMNNKCPLTSYVLMGFSQGAVI EECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEE AGDIASDIGNGRGPVDDDLVLGVTLIADGRRQQGVGNDIGPNPPGQGAEVTLHEVPILSG ECHHHHHHCCCCCCCCCCCEEEEEEEECCCHHCCCCCCCCCCCCCCCCEEEEEECCEECC LGLTMTGARPGGFGDLNAKTNEICAPGDLICAAPEEAFSVANLPATLNTLAGGAGQPVHA CCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHCCCCCCCCEE LYATTQCWSLDGVPATDWTLNWAHGLIANAPQPKHG EEEEHHEEECCCCCCCCCEEHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA