| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is pheA
Identifier: 41406291
GI number: 41406291
Start: 198432
End: 199379
Strand: Direct
Name: pheA
Synonym: MAP0193
Alternate gene names: 41406291
Gene position: 198432-199379 (Clockwise)
Preceding gene: 41406288
Following gene: 41406292
Centisome position: 4.11
GC content: 75.53
Gene sequence:
>948_bases GTGGCCCGCATCGCTTACCTCGGTCCGGAAGGGACCTTCACCGAGGCGGCGCTGCGGCAGATCACCGCCGCCGGCCTGGT CCCCGGACAGGGGGCGGACGGTGTGCGGCCCACGCCGGTCGACGGCACGCCCGCGGCGCTGGACGCGGTGCGCGACGGCG CCGCCGACTACGCGTGCGTGCCGATCGAGAACTCCATCGACGGCTCGGTGACGCCCACCCTGGACAGCCTCGCGATCGGC TCGCCGCTGCAGGTGTTCGCGGAGACGACGCTGGACGTGGCGTTCAGCATCGTGGTCAAGCCGGGACTGTCCGCCGCCGA CGTGCGGACCCTGGCAGCCATCGGGGTGGCCGCCGCCCAGGTGCGCCAGTGGGTGGCCGCCAACCTGGCCGGCGCGCAGC TGCGCCCGGCCTATTCCAACGCCGACGCCGCCCAGCAGGTGGCCGAGGGGCGCGCCGACGCCGCGGTGACCTCCCCGCTG GCCGCCGCCCGCTGGGGGTTGGACACCCTGGCCGACGGCGTGGTCGACGAACCCAACGCCCGCACCCGCTTCGTCCTGGT CGGGCCGCCCGCGCCGCCGCCGGCCCGCACCGGCGCCGACCGGACCTCGGTGGTGCTGCGCATCGACAACGCGCCGGGCG CCCTGCTGGCCGCGCTCGCGGAGTTCGGCATCCGCGGCATCGACCTGACCCGCATCGAATCCCGGCCCACCAGAACGGGT TTGGGCATCTACCGGTTCTTCGCCGATTGCGTGGGCCACATCGACGACGAACCCGTCGCCGAGGCGCTCAAGGCGCTGCA CCGCCGCTGTGCCGACGTGCGCTACCTGGGTTCGTGGCCCACCGGCACCCCCGCGGGGGCGCTGCCGCCGTCGACCGAGG AAGCGGTGCGCTGGCTGGCGGCGGTGCGGGACGGCAAACCCGAACCCCCCGGGGAGTCGCGGCGGTGA
Upstream 100 bases:
>100_bases GCGGTAACACGATTCTCCTTTGTTTAGGTAAGCCTAAGTTAACTTACCGCGTGTGGCGTGGCAAGAGTCTTCCCGCCGGC ACGCCGCTAGGGTTGGGTCC
Downstream 100 bases:
>100_bases GCGGCCGGTTGATCCTGGTGCGGCACGGCCAGTCGTACGGAAACGTCGAGCGCCGCCTCGACACCCGGCCGCCCGGCGCC GAGCTCACGCCGCTGGGCCG
Product: prephenate dehydratase
Products: NA
Alternate protein names: PDT
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MARIAYLGPEGTFTEAALRQITAAGLVPGQGADGVRPTPVDGTPAALDAVRDGAADYACVPIENSIDGSVTPTLDSLAIG SPLQVFAETTLDVAFSIVVKPGLSAADVRTLAAIGVAAAQVRQWVAANLAGAQLRPAYSNADAAQQVAEGRADAAVTSPL AAARWGLDTLADGVVDEPNARTRFVLVGPPAPPPARTGADRTSVVLRIDNAPGALLAALAEFGIRGIDLTRIESRPTRTG LGIYRFFADCVGHIDDEPVAEALKALHRRCADVRYLGSWPTGTPAGALPPSTEEAVRWLAAVRDGKPEPPGESRR
Sequences:
>Translated_315_residues MARIAYLGPEGTFTEAALRQITAAGLVPGQGADGVRPTPVDGTPAALDAVRDGAADYACVPIENSIDGSVTPTLDSLAIG SPLQVFAETTLDVAFSIVVKPGLSAADVRTLAAIGVAAAQVRQWVAANLAGAQLRPAYSNADAAQQVAEGRADAAVTSPL AAARWGLDTLADGVVDEPNARTRFVLVGPPAPPPARTGADRTSVVLRIDNAPGALLAALAEFGIRGIDLTRIESRPTRTG LGIYRFFADCVGHIDDEPVAEALKALHRRCADVRYLGSWPTGTPAGALPPSTEEAVRWLAAVRDGKPEPPGESRR >Mature_314_residues ARIAYLGPEGTFTEAALRQITAAGLVPGQGADGVRPTPVDGTPAALDAVRDGAADYACVPIENSIDGSVTPTLDSLAIGS PLQVFAETTLDVAFSIVVKPGLSAADVRTLAAIGVAAAQVRQWVAANLAGAQLRPAYSNADAAQQVAEGRADAAVTSPLA AARWGLDTLADGVVDEPNARTRFVLVGPPAPPPARTGADRTSVVLRIDNAPGALLAALAEFGIRGIDLTRIESRPTRTGL GIYRFFADCVGHIDDEPVAEALKALHRRCADVRYLGSWPTGTPAGALPPSTEEAVRWLAAVRDGKPEPPGESRR
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain
Homologues:
Organism=Escherichia coli, GI1788951, Length=282, Percent_Identity=24.468085106383, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHEA_MYCA1 (A0Q994)
Other databases:
- EMBL: CP000479 - RefSeq: YP_879482.1 - ProteinModelPortal: A0Q994 - SMR: A0Q994 - STRING: A0Q994 - EnsemblBacteria: EBMYCT00000012987 - GeneID: 4527988 - GenomeReviews: CP000479_GR - KEGG: mav:MAV_0188 - TIGR: MAV_0188 - eggNOG: COG0077 - GeneTree: EBGT00050000015705 - HOGENOM: HBG693866 - OMA: CRKWLDA - ProtClustDB: PRK11898 - BioCyc: MAVI243243:MAV_0188-MONOMER - InterPro: IPR002912 - InterPro: IPR001086 - InterPro: IPR018528
Pfam domain/function: PF01842 ACT; PF00800 PDT
EC number: =4.2.1.51
Molecular weight: Translated: 32562; Mature: 32431
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00857 PREPHENATE_DEHYDR_1; PS00858 PREPHENATE_DEHYDR_2; PS51171 PREPHENATE_DEHYDR_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIAYLGPEGTFTEAALRQITAAGLVPGQGADGVRPTPVDGTPAALDAVRDGAADYACV CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEE PIENSIDGSVTPTLDSLAIGSPLQVFAETTLDVAFSIVVKPGLSAADVRTLAAIGVAAAQ ECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH VRQWVAANLAGAQLRPAYSNADAAQQVAEGRADAAVTSPLAAARWGLDTLADGVVDEPNA HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCHHHHHHHCHHHHHCCCCCCCCC RTRFVLVGPPAPPPARTGADRTSVVLRIDNAPGALLAALAEFGIRGIDLTRIESRPTRTG CEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCH LGIYRFFADCVGHIDDEPVAEALKALHRRCADVRYLGSWPTGTPAGALPPSTEEAVRWLA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHH AVRDGKPEPPGESRR HHHCCCCCCCCCCCC >Mature Secondary Structure ARIAYLGPEGTFTEAALRQITAAGLVPGQGADGVRPTPVDGTPAALDAVRDGAADYACV CEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEE PIENSIDGSVTPTLDSLAIGSPLQVFAETTLDVAFSIVVKPGLSAADVRTLAAIGVAAAQ ECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH VRQWVAANLAGAQLRPAYSNADAAQQVAEGRADAAVTSPLAAARWGLDTLADGVVDEPNA HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCHHHHHHHCHHHHHCCCCCCCCC RTRFVLVGPPAPPPARTGADRTSVVLRIDNAPGALLAALAEFGIRGIDLTRIESRPTRTG CEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCH LGIYRFFADCVGHIDDEPVAEALKALHRRCADVRYLGSWPTGTPAGALPPSTEEAVRWLA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHH AVRDGKPEPPGESRR HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA