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The map label for this gene is glpQ1

Identifier: 41406288

GI number: 41406288

Start: 195473

End: 196291

Strand: Direct

Name: glpQ1

Synonym: MAP0190

Alternate gene names: 41406288

Gene position: 195473-196291 (Clockwise)

Preceding gene: 41406287

Following gene: 41406291

Centisome position: 4.05

GC content: 72.53

Gene sequence:

>819_bases
ATGACGTGGGCCGACGAGGTGCTCGCCGGGCATCCCTTTGTCGTTGCCCACCGCGGCGCGTCGGCCGCCCGGCCCGAACA
CACCCTGGCCGCCTACGACCTCGCCCTCAAGGAGGGCGCCGACGGCGTGGAATGCGACGTGCGGCTGACCCGCGACGGCC
ACCTGGTGTGCGTGCACGACCGCCGGCTGGACCGGACCTCGACGGGGGCCGGGTTGGTCAGCACGATGACGCTGGCGCAG
CTGCGTGAGCTCGAGTACGGGGCCTGGCACGACAGTTGGCGCGAGGACGGCGCGCACGGCGACACCAGTTTGCTGACGCT
GGACGCGCTGGTGTCGCTGGTGCTGGATTGGCGCCGGCCGGTGAAGCTGTTCATCGAGACCAAGCACCCGGTCCGGTACG
GCTCGCTGGTAGAGACCAAGCTGCTGGCACTGCTGCACCGGTTCGGCATCGCCGCGCCCGCCTCCGCCGACCGGTCCCGC
GCGGTGGTGATGTCGTTTTCGGCGTCGGCGGTGTGGCGGATCCGGCGGGCCGCGCCGCTGCTGCCCACCGTGCTGCTCGG
CAAGACCGCCCGCTATCTGATCAGCGGGGCGCCGACGGCGGTCGGGGCGACCGCGGTGGGGCCGTCGCTGCCGACGCTGA
GGGAGTATCCGCAGCTCGCCGACCGCGCCATCGCGCAGGGCCGGGCGGTTTACTGCTGGAACGTCGACGACTACCAGGAC
ATCGACTTCTGCCGCGACGTCGGCGTGGCCTGGCTGGCCACACACCACCCGGGCCGCACCAAGGCGTGGCTGCAGGGCCA
CCGCGACGGCAGCGGCTAG

Upstream 100 bases:

>100_bases
CCCGCGCACCGCTGGGTGATGGTTCCCGACGACGGCCCGCCCCCGCCGGCGCCGGGCGCCCCGGTTGAGTTCAAGGGCCA
GGAACCGGCAGCATAGGGGT

Downstream 100 bases:

>100_bases
CTCGACGGCTGCTGTTCGTCCGTGCTGCCGGCCGGCAGCTGCCCGTCGGAGGACAACGCGTCGAACAGCCGGGCCGCCCG
CGCGTGGTCCCACACCACCA

Product: GlpQ1

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase 1 [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTWADEVLAGHPFVVAHRGASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHDRRLDRTSTGAGLVSTMTLAQ
LRELEYGAWHDSWREDGAHGDTSLLTLDALVSLVLDWRRPVKLFIETKHPVRYGSLVETKLLALLHRFGIAAPASADRSR
AVVMSFSASAVWRIRRAAPLLPTVLLGKTARYLISGAPTAVGATAVGPSLPTLREYPQLADRAIAQGRAVYCWNVDDYQD
IDFCRDVGVAWLATHHPGRTKAWLQGHRDGSG

Sequences:

>Translated_272_residues
MTWADEVLAGHPFVVAHRGASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHDRRLDRTSTGAGLVSTMTLAQ
LRELEYGAWHDSWREDGAHGDTSLLTLDALVSLVLDWRRPVKLFIETKHPVRYGSLVETKLLALLHRFGIAAPASADRSR
AVVMSFSASAVWRIRRAAPLLPTVLLGKTARYLISGAPTAVGATAVGPSLPTLREYPQLADRAIAQGRAVYCWNVDDYQD
IDFCRDVGVAWLATHHPGRTKAWLQGHRDGSG
>Mature_271_residues
TWADEVLAGHPFVVAHRGASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHDRRLDRTSTGAGLVSTMTLAQL
RELEYGAWHDSWREDGAHGDTSLLTLDALVSLVLDWRRPVKLFIETKHPVRYGSLVETKLLALLHRFGIAAPASADRSRA
VVMSFSASAVWRIRRAAPLLPTVLLGKTARYLISGAPTAVGATAVGPSLPTLREYPQLADRAIAQGRAVYCWNVDDYQDI
DFCRDVGVAWLATHHPGRTKAWLQGHRDGSG

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=163, Percent_Identity=32.5153374233129, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI1789858, Length=80, Percent_Identity=37.5, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 29729; Mature: 29598

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWADEVLAGHPFVVAHRGASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHD
CCCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEC
RRLDRTSTGAGLVSTMTLAQLRELEYGAWHDSWREDGAHGDTSLLTLDALVSLVLDWRRP
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
VKLFIETKHPVRYGSLVETKLLALLHRFGIAAPASADRSRAVVMSFSASAVWRIRRAAPL
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCH
LPTVLLGKTARYLISGAPTAVGATAVGPSLPTLREYPQLADRAIAQGRAVYCWNVDDYQD
HHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCH
IDFCRDVGVAWLATHHPGRTKAWLQGHRDGSG
HHHHHHCCEEEEEECCCCCCHHHHCCCCCCCC
>Mature Secondary Structure 
TWADEVLAGHPFVVAHRGASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHD
CCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEC
RRLDRTSTGAGLVSTMTLAQLRELEYGAWHDSWREDGAHGDTSLLTLDALVSLVLDWRRP
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
VKLFIETKHPVRYGSLVETKLLALLHRFGIAAPASADRSRAVVMSFSASAVWRIRRAAPL
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCH
LPTVLLGKTARYLISGAPTAVGATAVGPSLPTLREYPQLADRAIAQGRAVYCWNVDDYQD
HHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCH
IDFCRDVGVAWLATHHPGRTKAWLQGHRDGSG
HHHHHHCCEEEEEECCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]